RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 FBXO31Q5XUX0 539 aaPredicted RBP24.36■■□□□ 1.49
SHTN1-203ENST00000392901 PRKRIP1Q9H875 184 aaPredicted RBP24.36■■□□□ 1.49
SHTN1-203ENST00000392901 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
SHTN1-203ENST00000392901 IFT172Q9UG01 1749 aa24.35■■□□□ 1.49
SHTN1-203ENST00000392901 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
SHTN1-203ENST00000392901 SLC52A1Q9NWF4 448 aa24.34■■□□□ 1.49
SHTN1-203ENST00000392901 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
SHTN1-203ENST00000392901 PIK3C2BO00750 1634 aa24.33■■□□□ 1.49
SHTN1-203ENST00000392901 RPGRIP1LQ68CZ1 1315 aa24.32■■□□□ 1.48
SHTN1-203ENST00000392901 SCAF11Q99590 1463 aaKnown RBP24.32■■□□□ 1.48
SHTN1-203ENST00000392901 NUTM2DQ5VT03 806 aaPredicted RBP24.32■■□□□ 1.48
SHTN1-203ENST00000392901 DISP3Q9P2K9 1392 aa24.31■■□□□ 1.48
SHTN1-203ENST00000392901 PREX1Q8TCU6 1659 aa24.31■■□□□ 1.48
SHTN1-203ENST00000392901 TMF1P82094 1093 aa24.3■■□□□ 1.48
SHTN1-203ENST00000392901 NRXN1Q9ULB1 1477 aa24.3■■□□□ 1.48
SHTN1-203ENST00000392901 KIAA1210Q9ULL0 1709 aa24.29■■□□□ 1.48
SHTN1-203ENST00000392901 IQGAP1P46940 1657 aa24.29■■□□□ 1.48
SHTN1-203ENST00000392901 CLTCQ00610 1675 aaKnown RBP24.28■■□□□ 1.48
SHTN1-203ENST00000392901 PPLO60437 1756 aa24.28■■□□□ 1.48
SHTN1-203ENST00000392901 ESF1Q9H501 851 aaKnown RBP24.27■■□□□ 1.48
SHTN1-203ENST00000392901 ERVK-7P63135 1459 aa24.26■■□□□ 1.47
SHTN1-203ENST00000392901 VGFO15240 615 aaPredicted RBP24.25■■□□□ 1.47
SHTN1-203ENST00000392901 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
SHTN1-203ENST00000392901 EIF3AQ14152 1382 aaKnown RBP24.24■■□□□ 1.47
SHTN1-203ENST00000392901 PIK3C2GO75747 1445 aa24.24■■□□□ 1.47
SHTN1-203ENST00000392901 C14orf93Q9H972 538 aaKnown RBP24.23■■□□□ 1.47
SHTN1-203ENST00000392901 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
SHTN1-203ENST00000392901 NEXMIFQ5QGS0 1516 aa24.21■■□□□ 1.47
SHTN1-203ENST00000392901 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.47
SHTN1-203ENST00000392901 TMEM132EQ6IEE7 984 aa24.2■■□□□ 1.46
SHTN1-203ENST00000392901 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
SHTN1-203ENST00000392901 TMEM131LA2VDJ0 1609 aa24.18■■□□□ 1.46
SHTN1-203ENST00000392901 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
SHTN1-203ENST00000392901 MYO5BQ9ULV0 1848 aa24.18■■□□□ 1.46
SHTN1-203ENST00000392901 TRAK1Q9UPV9 953 aa24.18■■□□□ 1.46
SHTN1-203ENST00000392901 SETBP1Q9Y6X0 1596 aa24.15■■□□□ 1.46
SHTN1-203ENST00000392901 CDCA8Q53HL2 280 aa24.15■■□□□ 1.46
SHTN1-203ENST00000392901 PANK3Q9H999 370 aa24.15■■□□□ 1.46
SHTN1-203ENST00000392901 SPATA31D1Q6ZQQ2 1576 aa24.14■■□□□ 1.45
SHTN1-203ENST00000392901 ADGRB1O14514 1584 aa24.12■■□□□ 1.45
SHTN1-203ENST00000392901 PER1O15534 1290 aaPredicted RBP24.12■■□□□ 1.45
SHTN1-203ENST00000392901 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
SHTN1-203ENST00000392901 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
SHTN1-203ENST00000392901 CENPJQ9HC77 1338 aaPredicted RBP24.1■■□□□ 1.45
SHTN1-203ENST00000392901 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
SHTN1-203ENST00000392901 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.44
SHTN1-203ENST00000392901 HNRNPUQ00839 825 aaKnown RBP eCLIP24.07■■□□□ 1.44
SHTN1-203ENST00000392901 RALBP1Q15311 655 aa24.06■■□□□ 1.44
SHTN1-203ENST00000392901 A2ML1A8K2U0 1454 aa24.06■■□□□ 1.44
SHTN1-203ENST00000392901 KTN1Q86UP2 1357 aaKnown RBP24.04■■□□□ 1.44
SHTN1-203ENST00000392901 CC2D1BQ5T0F9 858 aaKnown RBP24.04■■□□□ 1.44
SHTN1-203ENST00000392901 MYO3AQ8NEV4 1616 aa24.03■■□□□ 1.44
SHTN1-203ENST00000392901 STK26Q9P289 416 aa24.03■■□□□ 1.44
SHTN1-203ENST00000392901 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
SHTN1-203ENST00000392901 TNRQ92752 1358 aa24.02■■□□□ 1.43
SHTN1-203ENST00000392901 MYBBP1AQ9BQG0 1328 aaKnown RBP24.01■■□□□ 1.43
SHTN1-203ENST00000392901 TMC1Q8TDI8 760 aa24.01■■□□□ 1.43
SHTN1-203ENST00000392901 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
SHTN1-203ENST00000392901 KDM5AP29375 1690 aaKnown RBP24■■□□□ 1.43
SHTN1-203ENST00000392901 RIMS2Q9UQ26 1411 aa24■■□□□ 1.43
SHTN1-203ENST00000392901 KNSTRNQ9Y448 316 aa23.99■■□□□ 1.43
SHTN1-203ENST00000392901 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
SHTN1-203ENST00000392901 PARD3Q8TEW0 1356 aa23.98■■□□□ 1.43
SHTN1-203ENST00000392901 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
SHTN1-203ENST00000392901 QRICH2Q9H0J4 1663 aa23.97■■□□□ 1.43
SHTN1-203ENST00000392901 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
SHTN1-203ENST00000392901 MYOM1P52179 1685 aa23.95■■□□□ 1.42
SHTN1-203ENST00000392901 ALKQ9UM73 1620 aa23.94■■□□□ 1.42
SHTN1-203ENST00000392901 ARHGEF28Q8N1W1 1705 aaKnown RBP23.93■■□□□ 1.42
SHTN1-203ENST00000392901 BRD4O60885 1362 aaPredicted RBP23.93■■□□□ 1.42
SHTN1-203ENST00000392901 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
SHTN1-203ENST00000392901 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.92■■□□□ 1.42
SHTN1-203ENST00000392901 SUPT16HQ9Y5B9 1047 aaKnown RBP23.92■■□□□ 1.42
SHTN1-203ENST00000392901 PNISRQ8TF01 805 aaKnown RBP23.92■■□□□ 1.42
SHTN1-203ENST00000392901 YTHDC2Q9H6S0 1430 aaKnown RBP23.92■■□□□ 1.42
SHTN1-203ENST00000392901 AMER1Q5JTC6 1135 aaPredicted RBP23.9■■□□□ 1.42
SHTN1-203ENST00000392901 EVC2Q86UK5 1308 aa23.89■■□□□ 1.42
SHTN1-203ENST00000392901 PRAM1Q96QH2 718 aa23.89■■□□□ 1.42
SHTN1-203ENST00000392901 HDGFP51858 240 aaKnown RBP23.89■■□□□ 1.41
SHTN1-203ENST00000392901 POGKQ9P215 609 aa23.89■■□□□ 1.41
SHTN1-203ENST00000392901 BCANQ96GW7 911 aa23.87■■□□□ 1.41
SHTN1-203ENST00000392901 SLC12A5Q9H2X9 1139 aa23.87■■□□□ 1.41
SHTN1-203ENST00000392901 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
SHTN1-203ENST00000392901 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
SHTN1-203ENST00000392901 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
SHTN1-203ENST00000392901 PTPRMP28827 1452 aa23.85■■□□□ 1.41
SHTN1-203ENST00000392901 CABP2Q9NPB3 220 aa23.85■■□□□ 1.41
SHTN1-203ENST00000392901 C3P01024 1663 aa23.85■■□□□ 1.41
SHTN1-203ENST00000392901 MINK1Q8N4C8 1332 aaPredicted RBP23.84■■□□□ 1.41
SHTN1-203ENST00000392901 UBR1Q8IWV7 1749 aa23.84■■□□□ 1.41
SHTN1-203ENST00000392901 TULP4Q9NRJ4 1543 aa23.83■■□□□ 1.41
SHTN1-203ENST00000392901 NLRP1Q9C000 1473 aa23.82■■□□□ 1.4
SHTN1-203ENST00000392901 SRPK2P78362 688 aaKnown RBP23.81■■□□□ 1.4
SHTN1-203ENST00000392901 PUS7Q96PZ0 661 aaKnown RBP23.8■■□□□ 1.4
SHTN1-203ENST00000392901 ZBED9Q6R2W3 1325 aa23.8■■□□□ 1.4
SHTN1-203ENST00000392901 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
SHTN1-203ENST00000392901 WAPLQ7Z5K2 1190 aa23.79■■□□□ 1.4
SHTN1-203ENST00000392901 METP08581 1390 aa23.79■■□□□ 1.4
SHTN1-203ENST00000392901 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
SHTN1-203ENST00000392901 NRXN3Q9Y4C0 1643 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms