RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
USP30-203ENST00000392784 KIAA1210Q9ULL0 1709 aa12.79□□□□□ -0.36
USP30-203ENST00000392784 MYOM2P54296 1465 aa12.78□□□□□ -0.36
USP30-203ENST00000392784 MYO5BQ9ULV0 1848 aa12.78□□□□□ -0.36
USP30-203ENST00000392784 PIK3C2BO00750 1634 aa12.77□□□□□ -0.36
USP30-203ENST00000392784 ZC3H13Q5T200 1668 aaKnown RBP12.77□□□□□ -0.37
USP30-203ENST00000392784 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
USP30-203ENST00000392784 NUTM2DQ5VT03 806 aaPredicted RBP12.76□□□□□ -0.37
USP30-203ENST00000392784 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
USP30-203ENST00000392784 PREX1Q8TCU6 1659 aa12.75□□□□□ -0.37
USP30-203ENST00000392784 TMF1P82094 1093 aa12.73□□□□□ -0.37
USP30-203ENST00000392784 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
USP30-203ENST00000392784 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
USP30-203ENST00000392784 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
USP30-203ENST00000392784 SUPT16HQ9Y5B9 1047 aaKnown RBP12.72□□□□□ -0.37
USP30-203ENST00000392784 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
USP30-203ENST00000392784 MYOM1P52179 1685 aa12.72□□□□□ -0.37
USP30-203ENST00000392784 SENP3-EIF4A1A0A087X0R7 540 aa12.72□□□□□ -0.37
USP30-203ENST00000392784 FBXO31Q5XUX0 539 aaPredicted RBP12.72□□□□□ -0.37
USP30-203ENST00000392784 IDI1Q13907 227 aa12.71□□□□□ -0.37
USP30-203ENST00000392784 PANK3Q9H999 370 aa12.71□□□□□ -0.37
USP30-203ENST00000392784 CLTCQ00610 1675 aaKnown RBP12.71□□□□□ -0.37
USP30-203ENST00000392784 PIK3C2GO75747 1445 aa12.71□□□□□ -0.37
USP30-203ENST00000392784 NEXMIFQ5QGS0 1516 aa12.71□□□□□ -0.37
USP30-203ENST00000392784 MLECQ14165 292 aa12.69□□□□□ -0.38
USP30-203ENST00000392784 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
USP30-203ENST00000392784 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
USP30-203ENST00000392784 CC2D1BQ5T0F9 858 aaKnown RBP12.69□□□□□ -0.38
USP30-203ENST00000392784 ADGRB1O14514 1584 aa12.69□□□□□ -0.38
USP30-203ENST00000392784 ARHGEF40Q8TER5 1519 aa12.68□□□□□ -0.38
USP30-203ENST00000392784 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
USP30-203ENST00000392784 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
USP30-203ENST00000392784 PARD3Q8TEW0 1356 aa12.68□□□□□ -0.38
USP30-203ENST00000392784 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
USP30-203ENST00000392784 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
USP30-203ENST00000392784 SETBP1Q9Y6X0 1596 aa12.67□□□□□ -0.38
USP30-203ENST00000392784 MYO3AQ8NEV4 1616 aa12.67□□□□□ -0.38
USP30-203ENST00000392784 AGLP35573 1532 aa12.67□□□□□ -0.38
USP30-203ENST00000392784 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
USP30-203ENST00000392784 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
USP30-203ENST00000392784 KTN1Q86UP2 1357 aaKnown RBP12.67□□□□□ -0.38
USP30-203ENST00000392784 TRAK1Q9UPV9 953 aa12.67□□□□□ -0.38
USP30-203ENST00000392784 C14orf93Q9H972 538 aaKnown RBP12.66□□□□□ -0.38
USP30-203ENST00000392784 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
USP30-203ENST00000392784 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
USP30-203ENST00000392784 PNISRQ8TF01 805 aaKnown RBP12.66□□□□□ -0.38
USP30-203ENST00000392784 RALBP1Q15311 655 aa12.65□□□□□ -0.38
USP30-203ENST00000392784 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.39
USP30-203ENST00000392784 FKBP8Q14318 412 aa12.64□□□□□ -0.39
USP30-203ENST00000392784 BCANQ96GW7 911 aa12.64□□□□□ -0.39
USP30-203ENST00000392784 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
USP30-203ENST00000392784 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
USP30-203ENST00000392784 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
USP30-203ENST00000392784 SLC52A1Q9NWF4 448 aa12.63□□□□□ -0.39
USP30-203ENST00000392784 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
USP30-203ENST00000392784 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
USP30-203ENST00000392784 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
USP30-203ENST00000392784 VGFO15240 615 aaPredicted RBP12.61□□□□□ -0.39
USP30-203ENST00000392784 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
USP30-203ENST00000392784 NLRP13Q86W25 1043 aa12.6□□□□□ -0.39
USP30-203ENST00000392784 SPATA31D1Q6ZQQ2 1576 aa12.59□□□□□ -0.39
USP30-203ENST00000392784 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
USP30-203ENST00000392784 IRX6P78412 446 aaPredicted RBP12.59□□□□□ -0.39
USP30-203ENST00000392784 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
USP30-203ENST00000392784 SBNO2Q9Y2G9 1366 aa12.58□□□□□ -0.4
USP30-203ENST00000392784 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.4
USP30-203ENST00000392784 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
USP30-203ENST00000392784 STK26Q9P289 416 aa12.57□□□□□ -0.4
USP30-203ENST00000392784 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
USP30-203ENST00000392784 TULP4Q9NRJ4 1543 aa12.57□□□□□ -0.4
USP30-203ENST00000392784 A2ML1A8K2U0 1454 aa12.56□□□□□ -0.4
USP30-203ENST00000392784 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
USP30-203ENST00000392784 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
USP30-203ENST00000392784 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
USP30-203ENST00000392784 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
USP30-203ENST00000392784 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
USP30-203ENST00000392784 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
USP30-203ENST00000392784 NEFLP07196 543 aa12.54□□□□□ -0.4
USP30-203ENST00000392784 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
USP30-203ENST00000392784 SETD1AO15047 1707 aaKnown RBP12.53□□□□□ -0.4
USP30-203ENST00000392784 PTPRMP28827 1452 aa12.53□□□□□ -0.4
USP30-203ENST00000392784 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
USP30-203ENST00000392784 YTHDC2Q9H6S0 1430 aaKnown RBP12.51□□□□□ -0.41
USP30-203ENST00000392784 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
USP30-203ENST00000392784 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
USP30-203ENST00000392784 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
USP30-203ENST00000392784 NSD3Q9BZ95 1437 aa12.5□□□□□ -0.41
USP30-203ENST00000392784 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
USP30-203ENST00000392784 MINK1Q8N4C8 1332 aaPredicted RBP12.5□□□□□ -0.41
USP30-203ENST00000392784 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
USP30-203ENST00000392784 PRAM1Q96QH2 718 aa12.49□□□□□ -0.41
USP30-203ENST00000392784 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
USP30-203ENST00000392784 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
USP30-203ENST00000392784 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
USP30-203ENST00000392784 BLMP54132 1417 aaPredicted RBP12.49□□□□□ -0.41
USP30-203ENST00000392784 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
USP30-203ENST00000392784 EVC2Q86UK5 1308 aa12.48□□□□□ -0.41
USP30-203ENST00000392784 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
USP30-203ENST00000392784 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
USP30-203ENST00000392784 TNRQ92752 1358 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms