RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 SCAF11Q99590 1463 aaKnown RBP27.56■■■□□ 2
PTPN11-202ENST00000392597 NOS1P29475 1434 aa27.56■■■□□ 2
PTPN11-202ENST00000392597 NRXN1Q9ULB1 1477 aa27.56■■■□□ 2
PTPN11-202ENST00000392597 ADAMTSL3P82987 1691 aa27.55■■■□□ 2
PTPN11-202ENST00000392597 FER1L4A9Z1Z3 1794 aa27.54■■■□□ 2
PTPN11-202ENST00000392597 KTN1Q86UP2 1357 aaKnown RBP27.53■■■□□ 2
PTPN11-202ENST00000392597 ESF1Q9H501 851 aaKnown RBP27.52■■■□□ 2
PTPN11-202ENST00000392597 CLTCQ00610 1675 aaKnown RBP27.52■■■□□ 2
PTPN11-202ENST00000392597 PIK3C2BO00750 1634 aa27.51■■■□□ 2
PTPN11-202ENST00000392597 TMF1P82094 1093 aa27.51■■□□□ 1.99
PTPN11-202ENST00000392597 CFAP65Q6ZU64 1925 aaKnown RBP27.51■■□□□ 1.99
PTPN11-202ENST00000392597 DISP3Q9P2K9 1392 aa27.49■■□□□ 1.99
PTPN11-202ENST00000392597 MRS2Q9HD23 443 aa27.49■■□□□ 1.99
PTPN11-202ENST00000392597 PPLO60437 1756 aa27.49■■□□□ 1.99
PTPN11-202ENST00000392597 EIF3AQ14152 1382 aaKnown RBP27.48■■□□□ 1.99
PTPN11-202ENST00000392597 RPGRIP1LQ68CZ1 1315 aa27.48■■□□□ 1.99
PTPN11-202ENST00000392597 CCDC184Q52MB2 194 aa27.47■■□□□ 1.99
PTPN11-202ENST00000392597 SYNMO15061 1565 aa27.47■■□□□ 1.99
PTPN11-202ENST00000392597 ADGRF5Q8IZF2 1346 aa27.44■■□□□ 1.98
PTPN11-202ENST00000392597 SETBP1Q9Y6X0 1596 aa27.43■■□□□ 1.98
PTPN11-202ENST00000392597 RIMS1Q86UR5 1692 aaKnown RBP27.42■■□□□ 1.98
PTPN11-202ENST00000392597 ZMYM3Q14202 1370 aa27.42■■□□□ 1.98
PTPN11-202ENST00000392597 SLC24A1O60721 1099 aa27.41■■□□□ 1.98
PTPN11-202ENST00000392597 RALBP1Q15311 655 aa27.41■■□□□ 1.98
PTPN11-202ENST00000392597 HNRNPUQ00839 825 aaKnown RBP eCLIP27.4■■□□□ 1.98
PTPN11-202ENST00000392597 CDCA8Q53HL2 280 aa27.4■■□□□ 1.98
PTPN11-202ENST00000392597 PIK3C2GO75747 1445 aa27.39■■□□□ 1.98
PTPN11-202ENST00000392597 PREX1Q8TCU6 1659 aa27.39■■□□□ 1.97
PTPN11-202ENST00000392597 CFAP70Q5T0N1 1121 aa27.38■■□□□ 1.97
PTPN11-202ENST00000392597 CHGAP10645 457 aaKnown RBP27.38■■□□□ 1.97
PTPN11-202ENST00000392597 SLC52A1Q9NWF4 448 aa27.37■■□□□ 1.97
PTPN11-202ENST00000392597 C3P01024 1663 aa27.37■■□□□ 1.97
PTPN11-202ENST00000392597 PER1O15534 1290 aaPredicted RBP27.36■■□□□ 1.97
PTPN11-202ENST00000392597 MYO3AQ8NEV4 1616 aa27.36■■□□□ 1.97
PTPN11-202ENST00000392597 MYBBP1AQ9BQG0 1328 aaKnown RBP27.34■■□□□ 1.97
PTPN11-202ENST00000392597 KDM4FA0A1W2PPD8 638 aa27.34■■□□□ 1.97
PTPN11-202ENST00000392597 FAM9BQ8IZU0 186 aa27.33■■□□□ 1.97
PTPN11-202ENST00000392597 BRD4O60885 1362 aaPredicted RBP27.33■■□□□ 1.97
PTPN11-202ENST00000392597 PTPRMP28827 1452 aa27.33■■□□□ 1.97
PTPN11-202ENST00000392597 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
PTPN11-202ENST00000392597 PARD3Q8TEW0 1356 aa27.32■■□□□ 1.96
PTPN11-202ENST00000392597 C14orf93Q9H972 538 aaKnown RBP27.32■■□□□ 1.96
PTPN11-202ENST00000392597 SPATA31D1Q6ZQQ2 1576 aa27.31■■□□□ 1.96
PTPN11-202ENST00000392597 SBNO2Q9Y2G9 1366 aa27.31■■□□□ 1.96
PTPN11-202ENST00000392597 ERVK-7P63135 1459 aa27.3■■□□□ 1.96
PTPN11-202ENST00000392597 ZFYVE9O95405 1425 aa27.29■■□□□ 1.96
PTPN11-202ENST00000392597 ADGRB1O14514 1584 aa27.29■■□□□ 1.96
PTPN11-202ENST00000392597 KDM5AP29375 1690 aaKnown RBP27.28■■□□□ 1.96
PTPN11-202ENST00000392597 PANK3Q9H999 370 aa27.28■■□□□ 1.96
PTPN11-202ENST00000392597 VGFO15240 615 aaPredicted RBP27.27■■□□□ 1.96
PTPN11-202ENST00000392597 CEBPAP49715 358 aaPredicted RBP27.27■■□□□ 1.96
PTPN11-202ENST00000392597 IDI1Q13907 227 aa27.27■■□□□ 1.96
PTPN11-202ENST00000392597 FBXO31Q5XUX0 539 aaPredicted RBP27.27■■□□□ 1.96
PTPN11-202ENST00000392597 ZBED9Q6R2W3 1325 aa27.27■■□□□ 1.96
PTPN11-202ENST00000392597 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.96
PTPN11-202ENST00000392597 TMC1Q8TDI8 760 aa27.25■■□□□ 1.95
PTPN11-202ENST00000392597 SUPT16HQ9Y5B9 1047 aaKnown RBP27.25■■□□□ 1.95
PTPN11-202ENST00000392597 MYOM1P52179 1685 aa27.24■■□□□ 1.95
PTPN11-202ENST00000392597 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
PTPN11-202ENST00000392597 NLRP13Q86W25 1043 aa27.23■■□□□ 1.95
PTPN11-202ENST00000392597 PNISRQ8TF01 805 aaKnown RBP27.23■■□□□ 1.95
PTPN11-202ENST00000392597 MYO5BQ9ULV0 1848 aa27.21■■□□□ 1.95
PTPN11-202ENST00000392597 TNRQ92752 1358 aa27.2■■□□□ 1.94
PTPN11-202ENST00000392597 LRPPRCP42704 1394 aaKnown RBP27.19■■□□□ 1.94
PTPN11-202ENST00000392597 CENPJQ9HC77 1338 aaPredicted RBP27.19■■□□□ 1.94
PTPN11-202ENST00000392597 SETD1BQ9UPS6 1966 aaKnown RBP27.19■■□□□ 1.94
PTPN11-202ENST00000392597 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
PTPN11-202ENST00000392597 QRICH2Q9H0J4 1663 aa27.15■■□□□ 1.94
PTPN11-202ENST00000392597 NPC1L1Q9UHC9 1359 aa27.15■■□□□ 1.94
PTPN11-202ENST00000392597 KNSTRNQ9Y448 316 aa27.14■■□□□ 1.94
PTPN11-202ENST00000392597 NLRP1Q9C000 1473 aa27.14■■□□□ 1.93
PTPN11-202ENST00000392597 NEFLP07196 543 aa27.13■■□□□ 1.93
PTPN11-202ENST00000392597 ASXL1Q8IXJ9 1541 aa27.12■■□□□ 1.93
PTPN11-202ENST00000392597 CC2D1BQ5T0F9 858 aaKnown RBP27.11■■□□□ 1.93
PTPN11-202ENST00000392597 ARHGEF28Q8N1W1 1705 aaKnown RBP27.1■■□□□ 1.93
PTPN11-202ENST00000392597 TRAK1Q9UPV9 953 aa27.1■■□□□ 1.93
PTPN11-202ENST00000392597 AMER1Q5JTC6 1135 aaPredicted RBP27.09■■□□□ 1.93
PTPN11-202ENST00000392597 INSRP06213 1382 aa27.09■■□□□ 1.93
PTPN11-202ENST00000392597 TMEM132EQ6IEE7 984 aa27.08■■□□□ 1.93
PTPN11-202ENST00000392597 PUS7Q96PZ0 661 aaKnown RBP27.06■■□□□ 1.92
PTPN11-202ENST00000392597 ZNF142P52746 1687 aaPredicted RBP27.05■■□□□ 1.92
PTPN11-202ENST00000392597 NUTM2DQ5VT03 806 aaPredicted RBP27.05■■□□□ 1.92
PTPN11-202ENST00000392597 CEP170BQ9Y4F5 1589 aaPredicted RBP27.04■■□□□ 1.92
PTPN11-202ENST00000392597 FKBP8Q14318 412 aa27.04■■□□□ 1.92
PTPN11-202ENST00000392597 A2ML1A8K2U0 1454 aa27.04■■□□□ 1.92
PTPN11-202ENST00000392597 UBR1Q8IWV7 1749 aa27.01■■□□□ 1.91
PTPN11-202ENST00000392597 STAG3Q9UJ98 1225 aa27.01■■□□□ 1.91
PTPN11-202ENST00000392597 SMG6Q86US8 1419 aaKnown RBP26.99■■□□□ 1.91
PTPN11-202ENST00000392597 ALKQ9UM73 1620 aa26.98■■□□□ 1.91
PTPN11-202ENST00000392597 EVC2Q86UK5 1308 aa26.97■■□□□ 1.91
PTPN11-202ENST00000392597 PPP2R1AP30153 589 aa26.95■■□□□ 1.9
PTPN11-202ENST00000392597 TULP4Q9NRJ4 1543 aa26.95■■□□□ 1.9
PTPN11-202ENST00000392597 RIMS2Q9UQ26 1411 aa26.95■■□□□ 1.9
PTPN11-202ENST00000392597 YTHDC2Q9H6S0 1430 aaKnown RBP26.94■■□□□ 1.9
PTPN11-202ENST00000392597 BLMP54132 1417 aaPredicted RBP26.93■■□□□ 1.9
PTPN11-202ENST00000392597 CARD14Q9BXL6 1004 aa26.92■■□□□ 1.9
PTPN11-202ENST00000392597 USP32Q8NFA0 1604 aa26.92■■□□□ 1.9
PTPN11-202ENST00000392597 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
PTPN11-202ENST00000392597 THEMISQ8N1K5 641 aaPredicted RBP26.91■■□□□ 1.9
PTPN11-202ENST00000392597 LMTK3Q96Q04 1460 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms