RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 RPGRIP1LQ68CZ1 1315 aa29.6■■■□□ 2.33
SPHK1-202ENST00000392496 PPLO60437 1756 aa29.6■■■□□ 2.33
SPHK1-202ENST00000392496 CHGAP10645 457 aaKnown RBP29.57■■■□□ 2.32
SPHK1-202ENST00000392496 SLC52A1Q9NWF4 448 aa29.57■■■□□ 2.32
SPHK1-202ENST00000392496 SCAF11Q99590 1463 aaKnown RBP29.55■■■□□ 2.32
SPHK1-202ENST00000392496 ADGRF5Q8IZF2 1346 aa29.55■■■□□ 2.32
SPHK1-202ENST00000392496 CLTCQ00610 1675 aaKnown RBP29.55■■■□□ 2.32
SPHK1-202ENST00000392496 ESF1Q9H501 851 aaKnown RBP29.54■■■□□ 2.32
SPHK1-202ENST00000392496 TESK2Q96S53 571 aa29.52■■■□□ 2.32
SPHK1-202ENST00000392496 ERVK-7P63135 1459 aa29.52■■■□□ 2.32
SPHK1-202ENST00000392496 MLECQ14165 292 aa29.51■■■□□ 2.31
SPHK1-202ENST00000392496 POLR3GLQ9BT43 218 aa29.51■■■□□ 2.31
SPHK1-202ENST00000392496 IDI1Q13907 227 aa29.49■■■□□ 2.31
SPHK1-202ENST00000392496 SETBP1Q9Y6X0 1596 aa29.47■■■□□ 2.31
SPHK1-202ENST00000392496 NEXMIFQ5QGS0 1516 aa29.47■■■□□ 2.31
SPHK1-202ENST00000392496 PIK3C2GO75747 1445 aa29.47■■■□□ 2.31
SPHK1-202ENST00000392496 CFAP70Q5T0N1 1121 aa29.47■■■□□ 2.31
SPHK1-202ENST00000392496 PRKRIP1Q9H875 184 aaPredicted RBP29.46■■■□□ 2.31
SPHK1-202ENST00000392496 TMEM131LA2VDJ0 1609 aa29.45■■■□□ 2.31
SPHK1-202ENST00000392496 EIF3AQ14152 1382 aaKnown RBP29.45■■■□□ 2.31
SPHK1-202ENST00000392496 TMF1P82094 1093 aa29.44■■■□□ 2.3
SPHK1-202ENST00000392496 SPATA31D1Q6ZQQ2 1576 aa29.44■■■□□ 2.3
SPHK1-202ENST00000392496 FBXO31Q5XUX0 539 aaPredicted RBP29.42■■■□□ 2.3
SPHK1-202ENST00000392496 DISP3Q9P2K9 1392 aa29.42■■■□□ 2.3
SPHK1-202ENST00000392496 ZFYVE9O95405 1425 aa29.41■■■□□ 2.3
SPHK1-202ENST00000392496 VGFO15240 615 aaPredicted RBP29.41■■■□□ 2.3
SPHK1-202ENST00000392496 C14orf93Q9H972 538 aaKnown RBP29.4■■■□□ 2.3
SPHK1-202ENST00000392496 MYO5BQ9ULV0 1848 aa29.4■■■□□ 2.3
SPHK1-202ENST00000392496 SLC24A1O60721 1099 aa29.35■■■□□ 2.29
SPHK1-202ENST00000392496 MYO3AQ8NEV4 1616 aa29.35■■■□□ 2.29
SPHK1-202ENST00000392496 ADGRB1O14514 1584 aa29.34■■■□□ 2.29
SPHK1-202ENST00000392496 ZMYM3Q14202 1370 aa29.33■■■□□ 2.29
SPHK1-202ENST00000392496 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
SPHK1-202ENST00000392496 FER1L4A9Z1Z3 1794 aa29.29■■■□□ 2.28
SPHK1-202ENST00000392496 SBNO2Q9Y2G9 1366 aa29.27■■■□□ 2.28
SPHK1-202ENST00000392496 KTN1Q86UP2 1357 aaKnown RBP29.26■■■□□ 2.27
SPHK1-202ENST00000392496 ADAMTSL3P82987 1691 aa29.26■■■□□ 2.27
SPHK1-202ENST00000392496 A2ML1A8K2U0 1454 aa29.25■■■□□ 2.27
SPHK1-202ENST00000392496 STAG3Q9UJ98 1225 aa29.25■■■□□ 2.27
SPHK1-202ENST00000392496 NUTM2DQ5VT03 806 aaPredicted RBP29.24■■■□□ 2.27
SPHK1-202ENST00000392496 KDM5AP29375 1690 aaKnown RBP29.22■■■□□ 2.27
SPHK1-202ENST00000392496 PER1O15534 1290 aaPredicted RBP29.21■■■□□ 2.27
SPHK1-202ENST00000392496 CENPJQ9HC77 1338 aaPredicted RBP29.2■■■□□ 2.27
SPHK1-202ENST00000392496 CCDC184Q52MB2 194 aa29.19■■■□□ 2.26
SPHK1-202ENST00000392496 SCAF1Q9H7N4 1312 aaKnown RBP29.19■■■□□ 2.26
SPHK1-202ENST00000392496 RALBP1Q15311 655 aa29.18■■■□□ 2.26
SPHK1-202ENST00000392496 TMEM132EQ6IEE7 984 aa29.18■■■□□ 2.26
SPHK1-202ENST00000392496 MRS2Q9HD23 443 aa29.18■■■□□ 2.26
SPHK1-202ENST00000392496 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
SPHK1-202ENST00000392496 TNRQ92752 1358 aa29.17■■■□□ 2.26
SPHK1-202ENST00000392496 PANK3Q9H999 370 aa29.17■■■□□ 2.26
SPHK1-202ENST00000392496 TRAK1Q9UPV9 953 aa29.17■■■□□ 2.26
SPHK1-202ENST00000392496 QRICH2Q9H0J4 1663 aa29.16■■■□□ 2.26
SPHK1-202ENST00000392496 ARHGEF28Q8N1W1 1705 aaKnown RBP29.15■■■□□ 2.26
SPHK1-202ENST00000392496 MYOM1P52179 1685 aa29.15■■■□□ 2.26
SPHK1-202ENST00000392496 RIMS2Q9UQ26 1411 aa29.15■■■□□ 2.26
SPHK1-202ENST00000392496 ASXL1Q8IXJ9 1541 aa29.14■■■□□ 2.26
SPHK1-202ENST00000392496 KDM4FA0A1W2PPD8 638 aa29.13■■■□□ 2.25
SPHK1-202ENST00000392496 PLPPR3Q6T4P5 718 aa29.12■■■□□ 2.25
SPHK1-202ENST00000392496 ALKQ9UM73 1620 aa29.11■■■□□ 2.25
SPHK1-202ENST00000392496 PARD3Q8TEW0 1356 aa29.11■■■□□ 2.25
SPHK1-202ENST00000392496 PTPRMP28827 1452 aa29.1■■■□□ 2.25
SPHK1-202ENST00000392496 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
SPHK1-202ENST00000392496 CNGB1Q14028 1251 aaPredicted RBP29.08■■■□□ 2.25
SPHK1-202ENST00000392496 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.08■■■□□ 2.25
SPHK1-202ENST00000392496 GTF3C3Q9Y5Q9 886 aa29.08■■■□□ 2.25
SPHK1-202ENST00000392496 CEBPAP49715 358 aaPredicted RBP29.07■■■□□ 2.24
SPHK1-202ENST00000392496 C3P01024 1663 aa29.06■■■□□ 2.24
SPHK1-202ENST00000392496 UBR1Q8IWV7 1749 aa29.06■■■□□ 2.24
SPHK1-202ENST00000392496 NLRP1Q9C000 1473 aa29.05■■■□□ 2.24
SPHK1-202ENST00000392496 BRD4O60885 1362 aaPredicted RBP29.05■■■□□ 2.24
SPHK1-202ENST00000392496 YTHDC2Q9H6S0 1430 aaKnown RBP29.04■■■□□ 2.24
SPHK1-202ENST00000392496 HDGFP51858 240 aaKnown RBP29.03■■■□□ 2.24
SPHK1-202ENST00000392496 SETD1AO15047 1707 aaKnown RBP29.02■■■□□ 2.24
SPHK1-202ENST00000392496 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
SPHK1-202ENST00000392496 FAM9BQ8IZU0 186 aa29.01■■■□□ 2.23
SPHK1-202ENST00000392496 KNSTRNQ9Y448 316 aa29.01■■■□□ 2.23
SPHK1-202ENST00000392496 HNRNPUQ00839 825 aaKnown RBP eCLIP29■■■□□ 2.23
SPHK1-202ENST00000392496 TMC1Q8TDI8 760 aa28.99■■■□□ 2.23
SPHK1-202ENST00000392496 SETD1BQ9UPS6 1966 aaKnown RBP28.98■■■□□ 2.23
SPHK1-202ENST00000392496 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
SPHK1-202ENST00000392496 NRXN3Q9Y4C0 1643 aa28.97■■■□□ 2.23
SPHK1-202ENST00000392496 NPC1L1Q9UHC9 1359 aa28.97■■■□□ 2.23
SPHK1-202ENST00000392496 TMEM2Q9UHN6 1383 aa28.97■■■□□ 2.23
SPHK1-202ENST00000392496 CC2D1BQ5T0F9 858 aaKnown RBP28.96■■■□□ 2.23
SPHK1-202ENST00000392496 STK26Q9P289 416 aa28.96■■■□□ 2.23
SPHK1-202ENST00000392496 EVC2Q86UK5 1308 aa28.96■■■□□ 2.23
SPHK1-202ENST00000392496 TULP4Q9NRJ4 1543 aa28.96■■■□□ 2.23
SPHK1-202ENST00000392496 DLC1Q96QB1 1528 aa28.95■■■□□ 2.23
SPHK1-202ENST00000392496 AMER1Q5JTC6 1135 aaPredicted RBP28.95■■■□□ 2.22
SPHK1-202ENST00000392496 PNISRQ8TF01 805 aaKnown RBP28.94■■■□□ 2.22
SPHK1-202ENST00000392496 SENP3Q9H4L4 574 aaPredicted RBP28.93■■■□□ 2.22
SPHK1-202ENST00000392496 LRPPRCP42704 1394 aaKnown RBP28.93■■■□□ 2.22
SPHK1-202ENST00000392496 PRAM1Q96QH2 718 aa28.88■■■□□ 2.21
SPHK1-202ENST00000392496 ABCC11Q96J66 1382 aa28.88■■■□□ 2.21
SPHK1-202ENST00000392496 POGKQ9P215 609 aa28.88■■■□□ 2.21
SPHK1-202ENST00000392496 AEBP2Q6ZN18 517 aaPredicted RBP28.87■■■□□ 2.21
SPHK1-202ENST00000392496 CARD14Q9BXL6 1004 aa28.84■■■□□ 2.21
SPHK1-202ENST00000392496 SLIT1O75093 1534 aa28.84■■■□□ 2.21
SPHK1-202ENST00000392496 ZBED9Q6R2W3 1325 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms