RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 DAPK1P53355 1430 aa16.16■□□□□ 0.18
PCNX4-202ENST00000391611 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
PCNX4-202ENST00000391611 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
PCNX4-202ENST00000391611 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
PCNX4-202ENST00000391611 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
PCNX4-202ENST00000391611 HMOX1P09601 288 aa16.14■□□□□ 0.18
PCNX4-202ENST00000391611 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.18
PCNX4-202ENST00000391611 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.17
PCNX4-202ENST00000391611 LTV1Q96GA3 475 aaPredicted RBP16.14■□□□□ 0.17
PCNX4-202ENST00000391611 STK31Q9BXU1 1019 aa16.14■□□□□ 0.17
PCNX4-202ENST00000391611 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
PCNX4-202ENST00000391611 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
PCNX4-202ENST00000391611 TSR2Q969E8 191 aaKnown RBP16.13■□□□□ 0.17
PCNX4-202ENST00000391611 DIAPH1O60610 1272 aaKnown RBP16.13■□□□□ 0.17
PCNX4-202ENST00000391611 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
PCNX4-202ENST00000391611 EHBP1L1Q8N3D4 1523 aa16.12■□□□□ 0.17
PCNX4-202ENST00000391611 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
PCNX4-202ENST00000391611 NGEFQ8N5V2 710 aa16.11■□□□□ 0.17
PCNX4-202ENST00000391611 HMMRO75330 724 aa16.11■□□□□ 0.17
PCNX4-202ENST00000391611 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
PCNX4-202ENST00000391611 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
PCNX4-202ENST00000391611 EXOSC9Q06265 439 aaKnown RBP16.1■□□□□ 0.17
PCNX4-202ENST00000391611 RILPL2Q969X0 211 aa16.1■□□□□ 0.17
PCNX4-202ENST00000391611 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
PCNX4-202ENST00000391611 ST18O60284 1047 aa16.09■□□□□ 0.17
PCNX4-202ENST00000391611 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
PCNX4-202ENST00000391611 HDGFP51858 240 aaKnown RBP16.09■□□□□ 0.17
PCNX4-202ENST00000391611 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
PCNX4-202ENST00000391611 EPRSP07814 1512 aaKnown RBP16.08■□□□□ 0.17
PCNX4-202ENST00000391611 PTMSP20962 102 aa16.08■□□□□ 0.17
PCNX4-202ENST00000391611 TROQ12816 1431 aaPredicted RBP16.08■□□□□ 0.16
PCNX4-202ENST00000391611 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
PCNX4-202ENST00000391611 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
PCNX4-202ENST00000391611 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
PCNX4-202ENST00000391611 LMOD3Q0VAK6 560 aa16.07■□□□□ 0.16
PCNX4-202ENST00000391611 ABCC5O15440 1437 aa16.06■□□□□ 0.16
PCNX4-202ENST00000391611 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
PCNX4-202ENST00000391611 C1orf115Q9H7X2 142 aa16.06■□□□□ 0.16
PCNX4-202ENST00000391611 AMPHP49418 695 aa16.06■□□□□ 0.16
PCNX4-202ENST00000391611 NGDNQ8NEJ9 315 aaKnown RBP16.05■□□□□ 0.16
PCNX4-202ENST00000391611 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
PCNX4-202ENST00000391611 TRAK2O60296 914 aa16.04■□□□□ 0.16
PCNX4-202ENST00000391611 CHAF1AQ13111 956 aaPredicted RBP16.04■□□□□ 0.16
PCNX4-202ENST00000391611 COG3Q96JB2 828 aa16.04■□□□□ 0.16
PCNX4-202ENST00000391611 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
PCNX4-202ENST00000391611 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
PCNX4-202ENST00000391611 ERBINQ96RT1 1412 aa16.03■□□□□ 0.16
PCNX4-202ENST00000391611 SYAP1Q96A49 352 aaPredicted RBP16.02■□□□□ 0.16
PCNX4-202ENST00000391611 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.15
PCNX4-202ENST00000391611 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.15
PCNX4-202ENST00000391611 ROCK1Q13464 1354 aa16.02■□□□□ 0.15
PCNX4-202ENST00000391611 SKOR2Q2VWA4 1001 aaPredicted RBP16.01■□□□□ 0.15
PCNX4-202ENST00000391611 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
PCNX4-202ENST00000391611 NOB1Q9ULX3 412 aaKnown RBP16.01■□□□□ 0.15
PCNX4-202ENST00000391611 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
PCNX4-202ENST00000391611 STAC3Q96MF2 364 aa16■□□□□ 0.15
PCNX4-202ENST00000391611 MCTP1Q6DN14 999 aa16■□□□□ 0.15
PCNX4-202ENST00000391611 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
PCNX4-202ENST00000391611 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
PCNX4-202ENST00000391611 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
PCNX4-202ENST00000391611 PTPN23Q9H3S7 1636 aa15.99■□□□□ 0.15
PCNX4-202ENST00000391611 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
PCNX4-202ENST00000391611 ZNF330Q9Y3S2 320 aaPredicted RBP15.98■□□□□ 0.15
PCNX4-202ENST00000391611 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
PCNX4-202ENST00000391611 ANO2Q9NQ90 1003 aa15.98■□□□□ 0.15
PCNX4-202ENST00000391611 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
PCNX4-202ENST00000391611 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
PCNX4-202ENST00000391611 CCDC9Q9Y3X0 531 aaKnown RBP15.97■□□□□ 0.15
PCNX4-202ENST00000391611 CHMP3Q9Y3E7 222 aa15.96■□□□□ 0.15
PCNX4-202ENST00000391611 GNAI1P63096 354 aa15.96■□□□□ 0.15
PCNX4-202ENST00000391611 REC8O95072 547 aa15.95■□□□□ 0.14
PCNX4-202ENST00000391611 RNF214Q8ND24 703 aa15.95■□□□□ 0.14
PCNX4-202ENST00000391611 PLB1Q6P1J6 1458 aa15.95■□□□□ 0.14
PCNX4-202ENST00000391611 MRE11P49959 708 aa15.94■□□□□ 0.14
PCNX4-202ENST00000391611 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
PCNX4-202ENST00000391611 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
PCNX4-202ENST00000391611 AAMPQ13685 434 aa15.94■□□□□ 0.14
PCNX4-202ENST00000391611 FAM43AQ8N2R8 423 aa15.94■□□□□ 0.14
PCNX4-202ENST00000391611 ATF7IPQ6VMQ6 1270 aa15.94■□□□□ 0.14
PCNX4-202ENST00000391611 DNMBPQ6XZF7 1577 aa15.93■□□□□ 0.14
PCNX4-202ENST00000391611 FAM13BQ9NYF5 915 aa15.93■□□□□ 0.14
PCNX4-202ENST00000391611 HECW1Q76N89 1606 aa15.93■□□□□ 0.14
PCNX4-202ENST00000391611 IGHDP01880 384 aa15.93■□□□□ 0.14
PCNX4-202ENST00000391611 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
PCNX4-202ENST00000391611 PRAM1Q96QH2 718 aa15.92■□□□□ 0.14
PCNX4-202ENST00000391611 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
PCNX4-202ENST00000391611 GOLGA6L6A8MZA4 724 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 MCM4P33991 863 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
PCNX4-202ENST00000391611 THUMPD2Q9BTF0 503 aaKnown RBP15.91■□□□□ 0.14
PCNX4-202ENST00000391611 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 NRDCO43847 1150 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 RARSP54136 660 aaKnown RBP15.91■□□□□ 0.14
PCNX4-202ENST00000391611 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
PCNX4-202ENST00000391611 CAVIN1Q6NZI2 390 aaKnown RBP15.91■□□□□ 0.14
PCNX4-202ENST00000391611 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCNX4-202ENST00000391611 CDC45O75419 566 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
PCNX4-202ENST00000391611 HSP90B1P14625 803 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms