RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 TLL1O43897 1013 aa5.15□□□□□ -1.59
RNU6-1228P-201ENST00000391014 TMEM134Q9H6X4 195 aa5.15□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PDZRN3Q9UPQ7 1066 aa5.15□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PCDHB3Q9Y5E6 796 aa5.15□□□□□ -1.59
RNU6-1228P-201ENST00000391014 RCCD1A6NED2 376 aa5.14□□□□□ -1.59
RNU6-1228P-201ENST00000391014 SLC10A3P09131 477 aa5.14□□□□□ -1.59
RNU6-1228P-201ENST00000391014 TMUB1Q9BVT8 246 aa5.14□□□□□ -1.59
RNU6-1228P-201ENST00000391014 NUTM2FA1L443 756 aa5.13□□□□□ -1.59
RNU6-1228P-201ENST00000391014 SEMA3EO15041 775 aa5.13□□□□□ -1.59
RNU6-1228P-201ENST00000391014 DNAJB2P25686 324 aa5.13□□□□□ -1.59
RNU6-1228P-201ENST00000391014 NECTIN2Q92692 538 aa5.13□□□□□ -1.59
RNU6-1228P-201ENST00000391014 ACTN4O43707 911 aaKnown RBP5.12□□□□□ -1.59
RNU6-1228P-201ENST00000391014 GGCXP38435 758 aa5.12□□□□□ -1.59
RNU6-1228P-201ENST00000391014 SLC19A1P41440 591 aa5.12□□□□□ -1.59
RNU6-1228P-201ENST00000391014 RBM46Q8TBY0 533 aaKnown RBP5.12□□□□□ -1.59
RNU6-1228P-201ENST00000391014 S1PR4O95977 384 aa5.11□□□□□ -1.59
RNU6-1228P-201ENST00000391014 LIAT1Q6ZQX7 453 aa5.11□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PRR14Q9BWN1 585 aa5.11□□□□□ -1.59
RNU6-1228P-201ENST00000391014 CFHP08603 1231 aa5.1□□□□□ -1.59
RNU6-1228P-201ENST00000391014 FECHP22830 423 aa5.1□□□□□ -1.59
RNU6-1228P-201ENST00000391014 SLC4A3P48751 1232 aa5.1□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PLA2G2CQ5R387 149 aa5.1□□□□□ -1.59
RNU6-1228P-201ENST00000391014 SPRYD7Q5W111 196 aa5.1□□□□□ -1.59
RNU6-1228P-201ENST00000391014 ZNF787Q6DD87 383 aa5.1□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PUS10Q3MIT2 529 aaKnown RBP5.09□□□□□ -1.59
RNU6-1228P-201ENST00000391014 RBM26Q5T8P6 1007 aaKnown RBP5.09□□□□□ -1.59
RNU6-1228P-201ENST00000391014 PXYLP1Q8TE99 480 aa5.09□□□□□ -1.59
RNU6-1228P-201ENST00000391014 POTECB2RU33 542 aa5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 FCHSD2O94868 740 aa5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 KMT5BQ4FZB7 885 aa5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 ZNF598Q86UK7 904 aaKnown RBP5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 SCUBE3Q8IX30 993 aa5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 ANKLE1Q8NAG6 615 aa5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 ZNF775Q96BV0 537 aaPredicted RBP5.08□□□□□ -1.6
RNU6-1228P-201ENST00000391014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.07□□□□□ -1.6
RNU6-1228P-201ENST00000391014 GDF9O60383 454 aa5.07□□□□□ -1.6
RNU6-1228P-201ENST00000391014 MYT1Q01538 1121 aa5.07□□□□□ -1.6
RNU6-1228P-201ENST00000391014 TNFRSF10AO00220 468 aa5.06□□□□□ -1.6
RNU6-1228P-201ENST00000391014 ADH1BP00325 375 aa5.06□□□□□ -1.6
RNU6-1228P-201ENST00000391014 METTL3Q86U44 580 aaKnown RBP5.06□□□□□ -1.6
RNU6-1228P-201ENST00000391014 NLRP7Q8WX94 980 aa5.06□□□□□ -1.6
RNU6-1228P-201ENST00000391014 TESPA1A2RU30 521 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 GPR37O15354 613 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 OATP04181 439 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PRR20EP86478 221 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PRR20CP86479 221 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PRR20DP86480 221 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PRR20BP86481 221 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PRR20AP86496 221 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 ZNF697Q5TEC3 545 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 SLC6A16Q9GZN6 736 aa5.05□□□□□ -1.6
RNU6-1228P-201ENST00000391014 NR1I2O75469 434 aa5.04□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PHOX2BQ99453 314 aa5.04□□□□□ -1.6
RNU6-1228P-201ENST00000391014 SPSB2Q99619 263 aa5.04□□□□□ -1.6
RNU6-1228P-201ENST00000391014 DGAT1O75907 488 aa5.03□□□□□ -1.6
RNU6-1228P-201ENST00000391014 HIC1Q14526 733 aa5.03□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PKDCCQ504Y2 493 aa5.03□□□□□ -1.6
RNU6-1228P-201ENST00000391014 THAP11Q96EK4 314 aa5.03□□□□□ -1.6
RNU6-1228P-201ENST00000391014 PKD2L1Q9P0L9 805 aa5.03□□□□□ -1.6
RNU6-1228P-201ENST00000391014 GNPATO15228 680 aa5.02□□□□□ -1.61
RNU6-1228P-201ENST00000391014 MORN1Q5T089 497 aa5.02□□□□□ -1.61
RNU6-1228P-201ENST00000391014 P3H3Q8IVL6 736 aa5.02□□□□□ -1.61
RNU6-1228P-201ENST00000391014 FAM160A2Q8N612 972 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1228P-201ENST00000391014 DAXXQ9UER7 740 aaPredicted RBP5.02□□□□□ -1.61
RNU6-1228P-201ENST00000391014 FAM187AA6NFU0 413 aa5.01□□□□□ -1.61
RNU6-1228P-201ENST00000391014 DDX11L8A8MPP1 907 aa5.01□□□□□ -1.61
RNU6-1228P-201ENST00000391014 ST8SIA5O15466 376 aa5.01□□□□□ -1.61
RNU6-1228P-201ENST00000391014 FUT2Q10981 343 aa5.01□□□□□ -1.61
RNU6-1228P-201ENST00000391014 DACH1Q9UI36 760 aa5.01□□□□□ -1.61
RNU6-1228P-201ENST00000391014 SLC27A5Q9Y2P5 690 aa5.01□□□□□ -1.61
RNU6-1228P-201ENST00000391014 FOXC1Q12948 553 aa5□□□□□ -1.61
RNU6-1228P-201ENST00000391014 RDH13Q8NBN7 331 aa5□□□□□ -1.61
RNU6-1228P-201ENST00000391014 PRDM9Q9NQV7 894 aa5□□□□□ -1.61
RNU6-1228P-201ENST00000391014 AAASQ9NRG9 546 aa5□□□□□ -1.61
RNU6-1228P-201ENST00000391014 ATP6V1AP38606 617 aa4.99□□□□□ -1.61
RNU6-1228P-201ENST00000391014 GCGRP47871 477 aa4.99□□□□□ -1.61
RNU6-1228P-201ENST00000391014 FCF1Q9Y324 198 aaKnown RBP4.99□□□□□ -1.61
RNU6-1228P-201ENST00000391014 RSPH4AQ5TD94 716 aa4.98□□□□□ -1.61
RNU6-1228P-201ENST00000391014 BRICD5Q6PL45 260 aa4.98□□□□□ -1.61
RNU6-1228P-201ENST00000391014 RNF19BQ6ZMZ0 732 aa4.98□□□□□ -1.61
RNU6-1228P-201ENST00000391014 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
RNU6-1228P-201ENST00000391014 TOR4AQ9NXH8 423 aa4.97□□□□□ -1.61
RNU6-1228P-201ENST00000391014 FMNL1O95466 1100 aaPredicted RBP4.96□□□□□ -1.62
RNU6-1228P-201ENST00000391014 RPIAP49247 311 aa4.96□□□□□ -1.62
RNU6-1228P-201ENST00000391014 PLCB2Q00722 1185 aa4.96□□□□□ -1.62
RNU6-1228P-201ENST00000391014 SMYD5Q6GMV2 418 aa4.96□□□□□ -1.62
RNU6-1228P-201ENST00000391014 KDM2AQ9Y2K7 1162 aa4.95□□□□□ -1.62
RNU6-1228P-201ENST00000391014 SALL2Q9Y467 1007 aaPredicted RBP4.95□□□□□ -1.62
RNU6-1228P-201ENST00000391014 CD2BP2O95400 341 aaKnown RBP4.94□□□□□ -1.62
RNU6-1228P-201ENST00000391014 AVPP01185 164 aa4.94□□□□□ -1.62
RNU6-1228P-201ENST00000391014 HLA-CQ95604 372 aa4.94□□□□□ -1.62
RNU6-1228P-201ENST00000391014 GMPR2Q9P2T1 348 aaKnown RBP4.94□□□□□ -1.62
RNU6-1228P-201ENST00000391014 CD46P15529 392 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 MSS51Q4VC12 460 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 LMOD2Q6P5Q4 547 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 TREML4Q6UXN2 200 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 GPIHBP1Q8IV16 184 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 SULF1Q8IWU6 871 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 CRIPAKQ8N1N5 446 aa4.93□□□□□ -1.62
RNU6-1228P-201ENST00000391014 CYP4X1Q8N118 509 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms