RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 SLC4A3P48751 1232 aa8.77□□□□□ -1.01
SNORA40.3-201ENST00000390964 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
SNORA40.3-201ENST00000390964 PHOX2BQ99453 314 aa8.77□□□□□ -1.01
SNORA40.3-201ENST00000390964 PLA2G2EQ9NZK7 142 aa8.77□□□□□ -1.01
SNORA40.3-201ENST00000390964 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1.01
SNORA40.3-201ENST00000390964 PTPN5P54829 565 aa8.76□□□□□ -1.01
SNORA40.3-201ENST00000390964 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
SNORA40.3-201ENST00000390964 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
SNORA40.3-201ENST00000390964 HPS5Q9UPZ3 1129 aa8.75□□□□□ -1.01
SNORA40.3-201ENST00000390964 PPP4CP60510 307 aa8.74□□□□□ -1.01
SNORA40.3-201ENST00000390964 AK7Q96M32 723 aa8.74□□□□□ -1.01
SNORA40.3-201ENST00000390964 WBP1LQ9NX94 342 aa8.73□□□□□ -1.01
SNORA40.3-201ENST00000390964 RNF40O75150 1001 aa8.72□□□□□ -1.01
SNORA40.3-201ENST00000390964 NLRP7Q8WX94 980 aa8.71□□□□□ -1.02
SNORA40.3-201ENST00000390964 SLC24A3Q9HC58 644 aa8.71□□□□□ -1.02
SNORA40.3-201ENST00000390964 AMHR2Q16671 573 aa8.7□□□□□ -1.02
SNORA40.3-201ENST00000390964 RSPH4AQ5TD94 716 aa8.7□□□□□ -1.02
SNORA40.3-201ENST00000390964 SULF1Q8IWU6 871 aa8.7□□□□□ -1.02
SNORA40.3-201ENST00000390964 TRIM66O15016 1216 aa8.69□□□□□ -1.02
SNORA40.3-201ENST00000390964 CLCN1P35523 988 aa8.69□□□□□ -1.02
SNORA40.3-201ENST00000390964 MDM2Q00987 491 aaPredicted RBP8.69□□□□□ -1.02
SNORA40.3-201ENST00000390964 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
SNORA40.3-201ENST00000390964 SLC10A3P09131 477 aa8.68□□□□□ -1.02
SNORA40.3-201ENST00000390964 TMUB1Q9BVT8 246 aa8.68□□□□□ -1.02
SNORA40.3-201ENST00000390964 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
SNORA40.3-201ENST00000390964 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
SNORA40.3-201ENST00000390964 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
SNORA40.3-201ENST00000390964 APLP1P51693 650 aa8.65□□□□□ -1.02
SNORA40.3-201ENST00000390964 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
SNORA40.3-201ENST00000390964 CFHP08603 1231 aa8.64□□□□□ -1.03
SNORA40.3-201ENST00000390964 PDE4DQ08499 809 aa8.64□□□□□ -1.03
SNORA40.3-201ENST00000390964 RDH13Q8NBN7 331 aa8.64□□□□□ -1.03
SNORA40.3-201ENST00000390964 REPIN1Q9BWE0 567 aaKnown RBP8.64□□□□□ -1.03
SNORA40.3-201ENST00000390964 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
SNORA40.3-201ENST00000390964 CD46P15529 392 aa8.63□□□□□ -1.03
SNORA40.3-201ENST00000390964 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
SNORA40.3-201ENST00000390964 ACTN4O43707 911 aaKnown RBP8.62□□□□□ -1.03
SNORA40.3-201ENST00000390964 GCGRP47871 477 aa8.62□□□□□ -1.03
SNORA40.3-201ENST00000390964 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
SNORA40.3-201ENST00000390964 SSTR3P32745 418 aaPredicted RBP8.61□□□□□ -1.03
SNORA40.3-201ENST00000390964 GIGYF2Q6Y7W6 1299 aaKnown RBP8.61□□□□□ -1.03
SNORA40.3-201ENST00000390964 PARP9Q8IXQ6 854 aa8.61□□□□□ -1.03
SNORA40.3-201ENST00000390964 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
SNORA40.3-201ENST00000390964 PCDHB3Q9Y5E6 796 aa8.59□□□□□ -1.03
SNORA40.3-201ENST00000390964 TJAP1Q5JTD0 557 aa8.58□□□□□ -1.04
SNORA40.3-201ENST00000390964 MTRQ99707 1265 aa8.58□□□□□ -1.04
SNORA40.3-201ENST00000390964 KCNC4Q03721 635 aa8.57□□□□□ -1.04
SNORA40.3-201ENST00000390964 IL21Q9HBE4 155 aa8.57□□□□□ -1.04
SNORA40.3-201ENST00000390964 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
SNORA40.3-201ENST00000390964 KDM4AO75164 1064 aa8.55□□□□□ -1.04
SNORA40.3-201ENST00000390964 FUT2Q10981 343 aa8.55□□□□□ -1.04
SNORA40.3-201ENST00000390964 GRIPAP1Q4V328 841 aa8.55□□□□□ -1.04
SNORA40.3-201ENST00000390964 RGS20O76081 388 aa8.54□□□□□ -1.04
SNORA40.3-201ENST00000390964 MS4A1P11836 297 aa8.54□□□□□ -1.04
SNORA40.3-201ENST00000390964 USP46P62068 366 aa8.54□□□□□ -1.04
SNORA40.3-201ENST00000390964 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
SNORA40.3-201ENST00000390964 ZPR1O75312 459 aa8.53□□□□□ -1.04
SNORA40.3-201ENST00000390964 NR1I2O75469 434 aa8.53□□□□□ -1.04
SNORA40.3-201ENST00000390964 COPS2P61201 443 aa8.53□□□□□ -1.04
SNORA40.3-201ENST00000390964 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
SNORA40.3-201ENST00000390964 MORN1Q5T089 497 aa8.52□□□□□ -1.05
SNORA40.3-201ENST00000390964 NUTM1Q86Y26 1132 aa8.52□□□□□ -1.05
SNORA40.3-201ENST00000390964 ZNF516Q92618 1163 aa8.52□□□□□ -1.05
SNORA40.3-201ENST00000390964 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
SNORA40.3-201ENST00000390964 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
SNORA40.3-201ENST00000390964 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
SNORA40.3-201ENST00000390964 SCUBE3Q8IX30 993 aa8.51□□□□□ -1.05
SNORA40.3-201ENST00000390964 SPIRE2Q8WWL2 714 aa8.5□□□□□ -1.05
SNORA40.3-201ENST00000390964 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
SNORA40.3-201ENST00000390964 HOXA2O43364 376 aa8.49□□□□□ -1.05
SNORA40.3-201ENST00000390964 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
SNORA40.3-201ENST00000390964 SALL2Q9Y467 1007 aaPredicted RBP8.49□□□□□ -1.05
SNORA40.3-201ENST00000390964 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
SNORA40.3-201ENST00000390964 NEUROD2Q15784 382 aa8.47□□□□□ -1.05
SNORA40.3-201ENST00000390964 A0A0G2JS52 829 aa8.46□□□□□ -1.06
SNORA40.3-201ENST00000390964 Q3C1V9 767 aa8.46□□□□□ -1.06
SNORA40.3-201ENST00000390964 DDRGK1Q96HY6 314 aa8.46□□□□□ -1.06
SNORA40.3-201ENST00000390964 TBC1D2Q9BYX2 928 aa8.46□□□□□ -1.06
SNORA40.3-201ENST00000390964 ADH1BP00325 375 aa8.45□□□□□ -1.06
SNORA40.3-201ENST00000390964 GJA5P36382 358 aa8.45□□□□□ -1.06
SNORA40.3-201ENST00000390964 BRPF1P55201 1214 aaPredicted RBP8.45□□□□□ -1.06
SNORA40.3-201ENST00000390964 NKX2-3Q8TAU0 364 aa8.45□□□□□ -1.06
SNORA40.3-201ENST00000390964 THAP11Q96EK4 314 aa8.45□□□□□ -1.06
SNORA40.3-201ENST00000390964 IRX2Q9BZI1 471 aaPredicted RBP8.45□□□□□ -1.06
SNORA40.3-201ENST00000390964 FMNL1O95466 1100 aaPredicted RBP8.44□□□□□ -1.06
SNORA40.3-201ENST00000390964 BRICD5Q6PL45 260 aa8.44□□□□□ -1.06
SNORA40.3-201ENST00000390964 SPSB2Q99619 263 aa8.44□□□□□ -1.06
SNORA40.3-201ENST00000390964 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
SNORA40.3-201ENST00000390964 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
SNORA40.3-201ENST00000390964 TLL1O43897 1013 aa8.43□□□□□ -1.06
SNORA40.3-201ENST00000390964 FDX1P10109 184 aa8.43□□□□□ -1.06
SNORA40.3-201ENST00000390964 HLA-CQ95604 372 aa8.43□□□□□ -1.06
SNORA40.3-201ENST00000390964 FAM117AQ9C073 453 aa8.43□□□□□ -1.06
SNORA40.3-201ENST00000390964 GGCXP38435 758 aa8.42□□□□□ -1.06
SNORA40.3-201ENST00000390964 SPTLC1O15269 473 aa8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 NDUFV2P19404 249 aa8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 MYSM1Q5VVJ2 828 aa8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
SNORA40.3-201ENST00000390964 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms