RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 DDRGK1Q96HY6 314 aa4.57□□□□□ -1.68
TRAV39-201ENST00000390466 RRAGDQ9NQL2 400 aaPredicted RBP4.57□□□□□ -1.68
TRAV39-201ENST00000390466 MYO3AQ8NEV4 1616 aa4.57□□□□□ -1.68
TRAV39-201ENST00000390466 DUOX2Q9NRD8 1548 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 ATP10AO60312 1499 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 NUP160Q12769 1436 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 ANKRD50Q9ULJ7 1429 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 ZMYM3Q14202 1370 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 DISP3Q9P2K9 1392 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 C20orf194Q5TEA3 1177 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 NLRP13Q86W25 1043 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 ATP1B4Q9UN42 357 aaPredicted RBP4.56□□□□□ -1.68
TRAV39-201ENST00000390466 KDM5AP29375 1690 aaKnown RBP4.56□□□□□ -1.68
TRAV39-201ENST00000390466 INO80Q9ULG1 1556 aaPredicted RBP4.56□□□□□ -1.68
TRAV39-201ENST00000390466 IQSEC2Q5JU85 1478 aa4.56□□□□□ -1.68
TRAV39-201ENST00000390466 PIK3C2GO75747 1445 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 PRG4Q92954 1404 aaPredicted RBP4.55□□□□□ -1.68
TRAV39-201ENST00000390466 PPRC1Q5VV67 1664 aaKnown RBP4.55□□□□□ -1.68
TRAV39-201ENST00000390466 USP32Q8NFA0 1604 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 AK9Q5TCS8 1911 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 FSD2A1L4K1 749 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 FRAT2O75474 233 aaPredicted RBP4.55□□□□□ -1.68
TRAV39-201ENST00000390466 SLC4A2P04920 1241 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 TRMT2AQ8IZ69 625 aaKnown RBP4.55□□□□□ -1.68
TRAV39-201ENST00000390466 TESK2Q96S53 571 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 SLC4A1APQ9BWU0 796 aaKnown RBP4.55□□□□□ -1.68
TRAV39-201ENST00000390466 RSPH6AQ9H0K4 717 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 ANTXR1Q9H6X2 564 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 C9orf84Q5VXU9 1444 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 NCOA3Q9Y6Q9 1424 aa4.55□□□□□ -1.68
TRAV39-201ENST00000390466 DEPDC5O75140 1603 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 ADGRB2O60241 1585 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 NEURL4Q96JN8 1562 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 KIF13AQ9H1H9 1805 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 SENP3-EIF4A1A0A087X0R7 540 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 DSG3P32926 999 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 SLC4A3P48751 1232 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 FAM161AQ3B820 660 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 DUSP27Q5VZP5 1158 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 CENPQQ7L2Z9 268 aaPredicted RBP4.54□□□□□ -1.68
TRAV39-201ENST00000390466 TMC1Q8TDI8 760 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 POGKQ9P215 609 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 ASXL1Q8IXJ9 1541 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 GRIN2AQ12879 1464 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 ERBINQ96RT1 1412 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 ABCA6Q8N139 1617 aa4.54□□□□□ -1.68
TRAV39-201ENST00000390466 TUBGCP6Q96RT7 1819 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 TTC37Q6PGP7 1564 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 ST20-MTHFSA0A0A6YYL1 179 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 PLIN1O60240 522 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 CAPN15O75808 1086 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 PCDH10Q9P2E7 1040 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 PLB1Q6P1J6 1458 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 SCAPERQ9BY12 1400 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 CLTCL1P53675 1640 aa4.53□□□□□ -1.68
TRAV39-201ENST00000390466 ANKRD30AQ9BXX3 1397 aa4.53□□□□□ -1.69
TRAV39-201ENST00000390466 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.69
TRAV39-201ENST00000390466 IFT140Q96RY7 1462 aa4.52□□□□□ -1.69
TRAV39-201ENST00000390466 PKD2Q13563 968 aa4.52□□□□□ -1.69
TRAV39-201ENST00000390466 PKNOX2Q96KN3 472 aa4.52□□□□□ -1.69
TRAV39-201ENST00000390466 ARHGAP31Q2M1Z3 1444 aa4.52□□□□□ -1.69
TRAV39-201ENST00000390466 ANKRD26Q9UPS8 1709 aa4.52□□□□□ -1.69
TRAV39-201ENST00000390466 MROH2AA6NES4 1674 aa4.51□□□□□ -1.69
TRAV39-201ENST00000390466 NKTRP30414 1462 aaKnown RBP4.51□□□□□ -1.69
TRAV39-201ENST00000390466 ZNF692Q9BU19 519 aaPredicted RBP4.51□□□□□ -1.69
TRAV39-201ENST00000390466 CFAP74Q9C0B2 1584 aa4.51□□□□□ -1.69
TRAV39-201ENST00000390466 TRPM2O94759 1503 aa4.51□□□□□ -1.69
TRAV39-201ENST00000390466 TET3O43151 1660 aa4.51□□□□□ -1.69
TRAV39-201ENST00000390466 TSPOAP1O95153 1857 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 VWDEQ8N2E2 1590 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 CLCN1P35523 988 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 FBLN2P98095 1184 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 CARD11Q9BXL7 1154 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 SYCP2Q9BX26 1530 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 NINLQ9Y2I6 1382 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 MAP3K4Q9Y6R4 1608 aa4.5□□□□□ -1.69
TRAV39-201ENST00000390466 ATP10BO94823 1461 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 MAGI1Q96QZ7 1491 aaPredicted RBP4.49□□□□□ -1.69
TRAV39-201ENST00000390466 ERBB4Q15303 1308 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 SEC24BO95487 1268 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 XRCC6P12956 609 aaKnown RBP eCLIP4.49□□□□□ -1.69
TRAV39-201ENST00000390466 DDIT3P35638 169 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 SLFN5Q08AF3 891 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 AMER1Q5JTC6 1135 aaPredicted RBP4.49□□□□□ -1.69
TRAV39-201ENST00000390466 NUP155O75694 1391 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 MROH1Q8NDA8 1641 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 KIF1BO60333 1816 aa4.49□□□□□ -1.69
TRAV39-201ENST00000390466 CENPJQ9HC77 1338 aaPredicted RBP4.48□□□□□ -1.69
TRAV39-201ENST00000390466 TCHHQ07283 1943 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 QRICH2Q9H0J4 1663 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 PPLO60437 1756 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 IGHDP01880 384 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 NBPF1Q3BBV0 1214 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 TBC1D32Q96NH3 1257 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 PANK2Q9BZ23 570 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 ERVK-7P63135 1459 aa4.48□□□□□ -1.69
TRAV39-201ENST00000390466 PPP2R1AP30153 589 aa4.47□□□□□ -1.69
TRAV39-201ENST00000390466 TBC1D2Q9BYX2 928 aa4.47□□□□□ -1.69
TRAV39-201ENST00000390466 ADAMTS8Q9UP79 889 aa4.47□□□□□ -1.69
TRAV39-201ENST00000390466 KANK1Q14678 1352 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms