RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 CHGAP10645 457 aaKnown RBP15.31■□□□□ 0.04
TRAV18-201ENST00000390446 CADPS2Q86UW7 1296 aa15.31■□□□□ 0.04
TRAV18-201ENST00000390446 NUTM2DQ5VT03 806 aaPredicted RBP15.3■□□□□ 0.04
TRAV18-201ENST00000390446 SLC52A1Q9NWF4 448 aa15.3■□□□□ 0.04
TRAV18-201ENST00000390446 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
TRAV18-201ENST00000390446 FGD6Q6ZV73 1430 aa15.29■□□□□ 0.04
TRAV18-201ENST00000390446 ERBINQ96RT1 1412 aa15.29■□□□□ 0.04
TRAV18-201ENST00000390446 TET3O43151 1660 aa15.28■□□□□ 0.04
TRAV18-201ENST00000390446 LRP6O75581 1613 aa15.28■□□□□ 0.04
TRAV18-201ENST00000390446 FOXD1Q16676 465 aa15.27■□□□□ 0.04
TRAV18-201ENST00000390446 KANK4Q5T7N3 995 aaPredicted RBP15.27■□□□□ 0.04
TRAV18-201ENST00000390446 C19orf44Q9H6X5 657 aa15.27■□□□□ 0.04
TRAV18-201ENST00000390446 AFF2P51816 1311 aa15.26■□□□□ 0.03
TRAV18-201ENST00000390446 APLP2Q06481 763 aa15.26■□□□□ 0.03
TRAV18-201ENST00000390446 QTRT2Q9H974 415 aaKnown RBP15.25■□□□□ 0.03
TRAV18-201ENST00000390446 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
TRAV18-201ENST00000390446 COL16A1Q07092 1604 aaPredicted RBP15.25■□□□□ 0.03
TRAV18-201ENST00000390446 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
TRAV18-201ENST00000390446 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRAV18-201ENST00000390446 C8orf37Q96NL8 207 aa15.24■□□□□ 0.03
TRAV18-201ENST00000390446 KDM5AP29375 1690 aaKnown RBP15.24■□□□□ 0.03
TRAV18-201ENST00000390446 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
TRAV18-201ENST00000390446 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
TRAV18-201ENST00000390446 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
TRAV18-201ENST00000390446 RIMS2Q9UQ26 1411 aa15.22■□□□□ 0.03
TRAV18-201ENST00000390446 NCOA3Q9Y6Q9 1424 aa15.22■□□□□ 0.03
TRAV18-201ENST00000390446 ABCC5O15440 1437 aa15.21■□□□□ 0.03
TRAV18-201ENST00000390446 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.03
TRAV18-201ENST00000390446 BRINP3Q76B58 766 aa15.2■□□□□ 0.02
TRAV18-201ENST00000390446 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
TRAV18-201ENST00000390446 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
TRAV18-201ENST00000390446 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
TRAV18-201ENST00000390446 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
TRAV18-201ENST00000390446 NOS1P29475 1434 aa15.19■□□□□ 0.02
TRAV18-201ENST00000390446 AMOTL2Q9Y2J4 779 aa15.19■□□□□ 0.02
TRAV18-201ENST00000390446 DAPK1P53355 1430 aa15.18■□□□□ 0.02
TRAV18-201ENST00000390446 VPS8Q8N3P4 1428 aa15.18■□□□□ 0.02
TRAV18-201ENST00000390446 CHD2O14647 1828 aaKnown RBP15.18■□□□□ 0.02
TRAV18-201ENST00000390446 LMTK2Q8IWU2 1503 aa15.17■□□□□ 0.02
TRAV18-201ENST00000390446 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
TRAV18-201ENST00000390446 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
TRAV18-201ENST00000390446 AHDC1Q5TGY3 1603 aaPredicted RBP15.17■□□□□ 0.02
TRAV18-201ENST00000390446 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.15■□□□□ 0.02
TRAV18-201ENST00000390446 ZFYVE9O95405 1425 aa15.15■□□□□ 0.02
TRAV18-201ENST00000390446 PTPN23Q9H3S7 1636 aa15.14■□□□□ 0.01
TRAV18-201ENST00000390446 ATAD2Q6PL18 1390 aa15.14■□□□□ 0.01
TRAV18-201ENST00000390446 CROCC2H7BZ55 1655 aa15.14■□□□□ 0.01
TRAV18-201ENST00000390446 RGS12O14924 1447 aa15.13■□□□□ 0.01
TRAV18-201ENST00000390446 FAM50AQ14320 339 aaKnown RBP15.13■□□□□ 0.01
TRAV18-201ENST00000390446 PIK3R4Q99570 1358 aa15.12■□□□□ 0.01
TRAV18-201ENST00000390446 DDX17Q92841 729 aaKnown RBP15.11■□□□□ 0.01
TRAV18-201ENST00000390446 USP21Q9UK80 565 aa15.11■□□□□ 0.01
TRAV18-201ENST00000390446 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
TRAV18-201ENST00000390446 GCC2Q8IWJ2 1684 aa15.1■□□□□ 0.01
TRAV18-201ENST00000390446 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
TRAV18-201ENST00000390446 MYO5BQ9ULV0 1848 aa15.09■□□□□ 0.01
TRAV18-201ENST00000390446 LOC105371045A0A1W2PR82 267 aa15.09■□□□□ 0.01
TRAV18-201ENST00000390446 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
TRAV18-201ENST00000390446 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
TRAV18-201ENST00000390446 TRPM2O94759 1503 aa15.08■□□□□ 0.01
TRAV18-201ENST00000390446 ASXL1Q8IXJ9 1541 aa15.08■□□□□ 0.01
TRAV18-201ENST00000390446 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
TRAV18-201ENST00000390446 DIP2AQ14689 1571 aa15.07■□□□□ 0
TRAV18-201ENST00000390446 TMEM131LA2VDJ0 1609 aa15.07■□□□□ 0
TRAV18-201ENST00000390446 ANKRD50Q9ULJ7 1429 aa15.07■□□□□ 0
TRAV18-201ENST00000390446 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
TRAV18-201ENST00000390446 CCDC125Q86Z20 511 aa15.05■□□□□ -0
TRAV18-201ENST00000390446 DCCP43146 1447 aa15.05■□□□□ -0
TRAV18-201ENST00000390446 MST1RQ04912 1400 aa15.04■□□□□ -0
TRAV18-201ENST00000390446 PTPRUQ92729 1446 aa15.03■□□□□ -0
TRAV18-201ENST00000390446 SF3B2Q13435 895 aaKnown RBP15□□□□□ -0.01
TRAV18-201ENST00000390446 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
TRAV18-201ENST00000390446 ADGRL2O95490 1459 aa14.98□□□□□ -0.01
TRAV18-201ENST00000390446 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
TRAV18-201ENST00000390446 SETBP1Q9Y6X0 1596 aa14.98□□□□□ -0.01
TRAV18-201ENST00000390446 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
TRAV18-201ENST00000390446 ADGRL3Q9HAR2 1447 aa14.97□□□□□ -0.01
TRAV18-201ENST00000390446 METP08581 1390 aa14.97□□□□□ -0.01
TRAV18-201ENST00000390446 NUP155O75694 1391 aa14.96□□□□□ -0.02
TRAV18-201ENST00000390446 UNC13BO14795 1591 aa14.95□□□□□ -0.02
TRAV18-201ENST00000390446 C1orf167Q5SNV9 1468 aa14.95□□□□□ -0.02
TRAV18-201ENST00000390446 PTCH1Q13635 1447 aa14.94□□□□□ -0.02
TRAV18-201ENST00000390446 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
TRAV18-201ENST00000390446 E9PCH4 1651 aa14.93□□□□□ -0.02
TRAV18-201ENST00000390446 SOS2Q07890 1332 aaPredicted RBP14.93□□□□□ -0.02
TRAV18-201ENST00000390446 ITGAEP38570 1179 aa14.93□□□□□ -0.02
TRAV18-201ENST00000390446 ESCO1Q5FWF5 840 aa14.93□□□□□ -0.02
TRAV18-201ENST00000390446 ATRNO75882 1429 aa14.92□□□□□ -0.02
TRAV18-201ENST00000390446 XRN1Q8IZH2 1706 aaKnown RBP14.92□□□□□ -0.02
TRAV18-201ENST00000390446 HAP1P54257 671 aaPredicted RBP14.91□□□□□ -0.02
TRAV18-201ENST00000390446 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
TRAV18-201ENST00000390446 DEFB132Q7Z7B7 95 aa14.9□□□□□ -0.02
TRAV18-201ENST00000390446 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
TRAV18-201ENST00000390446 NPHP3Q7Z494 1330 aa14.9□□□□□ -0.02
TRAV18-201ENST00000390446 BLMP54132 1417 aaPredicted RBP14.89□□□□□ -0.03
TRAV18-201ENST00000390446 A0A0G2JS52 829 aa14.88□□□□□ -0.03
TRAV18-201ENST00000390446 MYT1Q01538 1121 aa14.88□□□□□ -0.03
TRAV18-201ENST00000390446 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
TRAV18-201ENST00000390446 VGFO15240 615 aaPredicted RBP14.87□□□□□ -0.03
TRAV18-201ENST00000390446 FOXO3O43524 673 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms