RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 WDR70Q9NW82 654 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 GGCXP38435 758 aa1.98□□□□□ -2.09
SNORD28-201ENST00000384706 GSK3AP49840 483 aa1.98□□□□□ -2.09
SNORD28-201ENST00000384706 SWT1Q5T5J6 900 aaKnown RBP1.98□□□□□ -2.09
SNORD28-201ENST00000384706 SPRYD3Q8NCJ5 442 aa1.98□□□□□ -2.09
SNORD28-201ENST00000384706 BBXQ8WY36 941 aaPredicted RBP1.98□□□□□ -2.09
SNORD28-201ENST00000384706 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
SNORD28-201ENST00000384706 CDHR5Q9HBB8 845 aa1.98□□□□□ -2.09
SNORD28-201ENST00000384706 PPEF1O14829 653 aaPredicted RBP1.97□□□□□ -2.09
SNORD28-201ENST00000384706 ZPR1O75312 459 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 OSBPP22059 807 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 SLC19A1P41440 591 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 SLC4A3P48751 1232 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 PKDCCQ504Y2 493 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 PADI6Q6TGC4 694 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 SLF2Q8IX21 1173 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 CFAP44Q96MT7 982 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 TMUB1Q9BVT8 246 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 KRTAP17-1Q9BYP8 105 aa1.97□□□□□ -2.09
SNORD28-201ENST00000384706 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.97□□□□□ -2.09
SNORD28-201ENST00000384706 RNF223E7ERA6 249 aa1.96□□□□□ -2.1
SNORD28-201ENST00000384706 KCNMA1Q12791 1236 aa1.96□□□□□ -2.1
SNORD28-201ENST00000384706 PAXIP1Q6ZW49 1069 aaPredicted RBP1.96□□□□□ -2.1
SNORD28-201ENST00000384706 KCTD17Q8N5Z5 321 aa1.96□□□□□ -2.1
SNORD28-201ENST00000384706 NECTIN2Q92692 538 aa1.96□□□□□ -2.1
SNORD28-201ENST00000384706 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.1
SNORD28-201ENST00000384706 NPDC1Q9NQX5 325 aaPredicted RBP1.96□□□□□ -2.1
SNORD28-201ENST00000384706 PCDHB3Q9Y5E6 796 aa1.96□□□□□ -2.1
SNORD28-201ENST00000384706 FAM187AA6NFU0 413 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 PRR20EP86478 221 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 PRR20CP86479 221 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 PRR20DP86480 221 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 PRR20BP86481 221 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 PRR20AP86496 221 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 SPRYD7Q5W111 196 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 BLOC1S3Q6QNY0 202 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 ZNF598Q86UK7 904 aaKnown RBP1.95□□□□□ -2.1
SNORD28-201ENST00000384706 TTC13Q8NBP0 860 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 EYA1Q99502 592 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 AAASQ9NRG9 546 aa1.95□□□□□ -2.1
SNORD28-201ENST00000384706 RBM27Q9P2N5 1060 aaKnown RBP1.95□□□□□ -2.1
SNORD28-201ENST00000384706 ARIH1Q9Y4X5 557 aaPredicted RBP1.95□□□□□ -2.1
SNORD28-201ENST00000384706 TNFRSF10AO00220 468 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 TERTO14746 1132 aaKnown RBP1.94□□□□□ -2.1
SNORD28-201ENST00000384706 TLL1O43897 1013 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 S1PR4O95977 384 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 DNAJB2P25686 324 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 MLLT3P42568 568 aaPredicted RBP1.94□□□□□ -2.1
SNORD28-201ENST00000384706 FAM161AQ3B820 660 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 KMT5BQ4FZB7 885 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 ZNF697Q5TEC3 545 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 LIAT1Q6ZQX7 453 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 CRIPAKQ8N1N5 446 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 ANKLE1Q8NAG6 615 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 ZSCAN1Q8NBB4 408 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 RBM46Q8TBY0 533 aaKnown RBP1.94□□□□□ -2.1
SNORD28-201ENST00000384706 EMID1Q96A84 441 aaPredicted RBP1.94□□□□□ -2.1
SNORD28-201ENST00000384706 PRR14Q9BWN1 585 aa1.94□□□□□ -2.1
SNORD28-201ENST00000384706 NUTM2FA1L443 756 aa1.93□□□□□ -2.1
SNORD28-201ENST00000384706 RCCD1A6NED2 376 aa1.93□□□□□ -2.1
SNORD28-201ENST00000384706 ST8SIA5O15466 376 aa1.93□□□□□ -2.1
SNORD28-201ENST00000384706 ACTN4O43707 911 aaKnown RBP1.93□□□□□ -2.1
SNORD28-201ENST00000384706 CFHP08603 1231 aa1.93□□□□□ -2.1
SNORD28-201ENST00000384706 FOXC1Q12948 553 aa1.93□□□□□ -2.1
SNORD28-201ENST00000384706 TMEM134Q9H6X4 195 aa1.93□□□□□ -2.1
SNORD28-201ENST00000384706 BTBD11A6QL63 1104 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 GDF9O60383 454 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 NR1I2O75469 434 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 ADH1BP00325 375 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 SLC10A3P09131 477 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 PTGDRQ13258 359 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 PUS10Q3MIT2 529 aaKnown RBP1.92□□□□□ -2.1
SNORD28-201ENST00000384706 PLA2G2CQ5R387 149 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 RSPH4AQ5TD94 716 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 SCUBE3Q8IX30 993 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 SLC6A16Q9GZN6 736 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 DACH1Q9UI36 760 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 ADGRG1Q9Y653 693 aa1.92□□□□□ -2.1
SNORD28-201ENST00000384706 C11orf95C9JLR9 678 aaPredicted RBP1.91□□□□□ -2.1
SNORD28-201ENST00000384706 CD2BP2O95400 341 aaKnown RBP1.91□□□□□ -2.1
SNORD28-201ENST00000384706 ARHGEF1Q92888 912 aaKnown RBP1.91□□□□□ -2.1
SNORD28-201ENST00000384706 SPSB2Q99619 263 aa1.91□□□□□ -2.1
SNORD28-201ENST00000384706 GMPR2Q9P2T1 348 aaKnown RBP1.91□□□□□ -2.1
SNORD28-201ENST00000384706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.9□□□□□ -2.11
SNORD28-201ENST00000384706 TTC24A2A3L6 582 aaPredicted RBP1.9□□□□□ -2.11
SNORD28-201ENST00000384706 AXIN1O15169 862 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 FCHSD2O94868 740 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 OATP04181 439 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 CYP4X1Q8N118 509 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 RDH13Q8NBN7 331 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 TSHZ2Q9NRE2 1034 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 PKD2L1Q9P0L9 805 aa1.9□□□□□ -2.11
SNORD28-201ENST00000384706 FCF1Q9Y324 198 aaKnown RBP1.9□□□□□ -2.11
SNORD28-201ENST00000384706 DDX11L8A8MPP1 907 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 SEMA3EO15041 775 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 ZBTB24O43167 697 aaPredicted RBP1.89□□□□□ -2.11
SNORD28-201ENST00000384706 AVPP01185 164 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 FECHP22830 423 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 ATP6V1AP38606 617 aa1.89□□□□□ -2.11
SNORD28-201ENST00000384706 RPIAP49247 311 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms