RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 PNMA3Q9UL41 463 aa5.09□□□□□ -1.59
RNU6-880P-201ENST00000384526 S1PR4O95977 384 aa5.08□□□□□ -1.6
RNU6-880P-201ENST00000384526 AVPP01185 164 aa5.08□□□□□ -1.6
RNU6-880P-201ENST00000384526 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
RNU6-880P-201ENST00000384526 NBR1Q14596 966 aa5.08□□□□□ -1.6
RNU6-880P-201ENST00000384526 PLA2G2CQ5R387 149 aa5.08□□□□□ -1.6
RNU6-880P-201ENST00000384526 RYDENQ9NUL5 291 aaKnown RBP5.08□□□□□ -1.6
RNU6-880P-201ENST00000384526 BLOC1S3Q6QNY0 202 aa5.07□□□□□ -1.6
RNU6-880P-201ENST00000384526 TERTO14746 1132 aaKnown RBP5.06□□□□□ -1.6
RNU6-880P-201ENST00000384526 AXIN1O15169 862 aa5.06□□□□□ -1.6
RNU6-880P-201ENST00000384526 CHGAP10645 457 aaKnown RBP5.06□□□□□ -1.6
RNU6-880P-201ENST00000384526 PRIM1P49642 420 aaKnown RBP5.06□□□□□ -1.6
RNU6-880P-201ENST00000384526 SWT1Q5T5J6 900 aaKnown RBP5.06□□□□□ -1.6
RNU6-880P-201ENST00000384526 PCDHB3Q9Y5E6 796 aa5.06□□□□□ -1.6
RNU6-880P-201ENST00000384526 CAMK2BQ13554 666 aa5.05□□□□□ -1.6
RNU6-880P-201ENST00000384526 NUDT18Q6ZVK8 323 aa5.05□□□□□ -1.6
RNU6-880P-201ENST00000384526 NECTIN2Q92692 538 aa5.05□□□□□ -1.6
RNU6-880P-201ENST00000384526 SNRPBP14678 240 aaKnown RBP5.04□□□□□ -1.6
RNU6-880P-201ENST00000384526 SMCPP49901 116 aaPredicted RBP5.04□□□□□ -1.6
RNU6-880P-201ENST00000384526 FOXC1Q12948 553 aa5.04□□□□□ -1.6
RNU6-880P-201ENST00000384526 LMOD2Q6P5Q4 547 aa5.04□□□□□ -1.6
RNU6-880P-201ENST00000384526 SLF2Q8IX21 1173 aa5.04□□□□□ -1.6
RNU6-880P-201ENST00000384526 TOR4AQ9NXH8 423 aa5.04□□□□□ -1.6
RNU6-880P-201ENST00000384526 FAM181BA6NEQ2 426 aa5.03□□□□□ -1.6
RNU6-880P-201ENST00000384526 CTC1Q2NKJ3 1217 aa5.03□□□□□ -1.6
RNU6-880P-201ENST00000384526 CADPS2Q86UW7 1296 aa5.02□□□□□ -1.61
RNU6-880P-201ENST00000384526 CERKQ8TCT0 537 aa5.02□□□□□ -1.61
RNU6-880P-201ENST00000384526 CDHR5Q9HBB8 845 aa5.02□□□□□ -1.61
RNU6-880P-201ENST00000384526 HDGFP51858 240 aaKnown RBP5.01□□□□□ -1.61
RNU6-880P-201ENST00000384526 TRIM47Q96LD4 638 aa5.01□□□□□ -1.61
RNU6-880P-201ENST00000384526 PRR14Q9BWN1 585 aa5.01□□□□□ -1.61
RNU6-880P-201ENST00000384526 RBM27Q9P2N5 1060 aaKnown RBP5.01□□□□□ -1.61
RNU6-880P-201ENST00000384526 GTPBP6O43824 516 aaPredicted RBP5□□□□□ -1.61
RNU6-880P-201ENST00000384526 ADH1BP00325 375 aa5□□□□□ -1.61
RNU6-880P-201ENST00000384526 PDIA6Q15084 440 aa5□□□□□ -1.61
RNU6-880P-201ENST00000384526 ZSCAN1Q8NBB4 408 aa5□□□□□ -1.61
RNU6-880P-201ENST00000384526 ATP13A2Q9NQ11 1180 aa5□□□□□ -1.61
RNU6-880P-201ENST00000384526 GMPRP36959 345 aa4.99□□□□□ -1.61
RNU6-880P-201ENST00000384526 TTC13Q8NBP0 860 aa4.99□□□□□ -1.61
RNU6-880P-201ENST00000384526 CYP4X1Q8N118 509 aa4.97□□□□□ -1.61
RNU6-880P-201ENST00000384526 PADI6Q6TGC4 694 aa4.96□□□□□ -1.62
RNU6-880P-201ENST00000384526 SLC6A16Q9GZN6 736 aa4.96□□□□□ -1.62
RNU6-880P-201ENST00000384526 ACTN4O43707 911 aaKnown RBP4.95□□□□□ -1.62
RNU6-880P-201ENST00000384526 SMPD1P17405 629 aa4.94□□□□□ -1.62
RNU6-880P-201ENST00000384526 SLC4A3P48751 1232 aa4.94□□□□□ -1.62
RNU6-880P-201ENST00000384526 RPIAP49247 311 aa4.94□□□□□ -1.62
RNU6-880P-201ENST00000384526 GSK3AP49840 483 aa4.94□□□□□ -1.62
RNU6-880P-201ENST00000384526 EYA1Q99502 592 aa4.94□□□□□ -1.62
RNU6-880P-201ENST00000384526 SENP2Q9HC62 589 aa4.94□□□□□ -1.62
RNU6-880P-201ENST00000384526 KCTD17Q8N5Z5 321 aa4.93□□□□□ -1.62
RNU6-880P-201ENST00000384526 CFHP08603 1231 aa4.92□□□□□ -1.62
RNU6-880P-201ENST00000384526 SLC16A10Q8TF71 515 aa4.92□□□□□ -1.62
RNU6-880P-201ENST00000384526 ERBB4Q15303 1308 aa4.92□□□□□ -1.62
RNU6-880P-201ENST00000384526 NR1I2O75469 434 aa4.91□□□□□ -1.62
RNU6-880P-201ENST00000384526 KMT5BQ4FZB7 885 aa4.91□□□□□ -1.62
RNU6-880P-201ENST00000384526 KIFC2Q96AC6 838 aa4.91□□□□□ -1.62
RNU6-880P-201ENST00000384526 NPDC1Q9NQX5 325 aaPredicted RBP4.91□□□□□ -1.62
RNU6-880P-201ENST00000384526 NXF1Q9UBU9 619 aaKnown RBP4.91□□□□□ -1.62
RNU6-880P-201ENST00000384526 TTC24A2A3L6 582 aaPredicted RBP4.9□□□□□ -1.63
RNU6-880P-201ENST00000384526 SPDYE16A6NNV3 312 aaPredicted RBP4.9□□□□□ -1.63
RNU6-880P-201ENST00000384526 IRF7Q92985 503 aa4.9□□□□□ -1.63
RNU6-880P-201ENST00000384526 FCF1Q9Y324 198 aaKnown RBP4.9□□□□□ -1.63
RNU6-880P-201ENST00000384526 GRXCR2A6NFK2 248 aa4.89□□□□□ -1.63
RNU6-880P-201ENST00000384526 OSBPP22059 807 aa4.89□□□□□ -1.63
RNU6-880P-201ENST00000384526 VEGFBP49765 207 aa4.89□□□□□ -1.63
RNU6-880P-201ENST00000384526 KCNMA1Q12791 1236 aa4.89□□□□□ -1.63
RNU6-880P-201ENST00000384526 H3BM21 787 aa4.88□□□□□ -1.63
RNU6-880P-201ENST00000384526 J3QL48 77 aa4.88□□□□□ -1.63
RNU6-880P-201ENST00000384526 XP32Q5T750 250 aa4.88□□□□□ -1.63
RNU6-880P-201ENST00000384526 NPAS3Q8IXF0 933 aa4.88□□□□□ -1.63
RNU6-880P-201ENST00000384526 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
RNU6-880P-201ENST00000384526 TMEM134Q9H6X4 195 aa4.88□□□□□ -1.63
RNU6-880P-201ENST00000384526 WNT7AO00755 349 aa4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 CD2BP2O95400 341 aaKnown RBP4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 SLC10A3P09131 477 aa4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 DNAJB2P25686 324 aa4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 SCUBE3Q8IX30 993 aa4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 SNIP1Q8TAD8 396 aaKnown RBP4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 HPS1Q92902 700 aa4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 SPSB2Q99619 263 aa4.87□□□□□ -1.63
RNU6-880P-201ENST00000384526 PUS10Q3MIT2 529 aaKnown RBP4.84□□□□□ -1.63
RNU6-880P-201ENST00000384526 PRDM9Q9NQV7 894 aa4.84□□□□□ -1.63
RNU6-880P-201ENST00000384526 BMP1P13497 986 aa4.83□□□□□ -1.64
RNU6-880P-201ENST00000384526 TRIM46Q7Z4K8 759 aa4.83□□□□□ -1.64
RNU6-880P-201ENST00000384526 MRGPRX2Q96LB1 330 aa4.83□□□□□ -1.64
RNU6-880P-201ENST00000384526 TMEM151AQ8N4L1 468 aa4.82□□□□□ -1.64
RNU6-880P-201ENST00000384526 THAP11Q96EK4 314 aa4.82□□□□□ -1.64
RNU6-880P-201ENST00000384526 RCCD1A6NED2 376 aa4.81□□□□□ -1.64
RNU6-880P-201ENST00000384526 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
RNU6-880P-201ENST00000384526 VSIG8P0DPA2 414 aa4.81□□□□□ -1.64
RNU6-880P-201ENST00000384526 TRIM32Q13049 653 aa4.81□□□□□ -1.64
RNU6-880P-201ENST00000384526 FAM160A2Q8N612 972 aaPredicted RBP4.81□□□□□ -1.64
RNU6-880P-201ENST00000384526 ADGRG1Q9Y653 693 aa4.81□□□□□ -1.64
RNU6-880P-201ENST00000384526 GDF11O95390 407 aa4.8□□□□□ -1.64
RNU6-880P-201ENST00000384526 RASSF7Q02833 373 aa4.8□□□□□ -1.64
RNU6-880P-201ENST00000384526 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
RNU6-880P-201ENST00000384526 ARIH1Q9Y4X5 557 aaPredicted RBP4.8□□□□□ -1.64
RNU6-880P-201ENST00000384526 RBM46Q8TBY0 533 aaKnown RBP4.79□□□□□ -1.64
RNU6-880P-201ENST00000384526 MORN1Q5T089 497 aa4.78□□□□□ -1.64
RNU6-880P-201ENST00000384526 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms