RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 MADDQ8WXG6 1647 aa12.47□□□□□ -0.41
RNU1-28P-201ENST00000383861 CEBPAP49715 358 aaPredicted RBP12.46□□□□□ -0.41
RNU1-28P-201ENST00000383861 A2ML1A8K2U0 1454 aa12.46□□□□□ -0.42
RNU1-28P-201ENST00000383861 IFT172Q9UG01 1749 aa12.45□□□□□ -0.42
RNU1-28P-201ENST00000383861 TRPM1Q7Z4N2 1603 aa12.45□□□□□ -0.42
RNU1-28P-201ENST00000383861 NEXMIFQ5QGS0 1516 aa12.45□□□□□ -0.42
RNU1-28P-201ENST00000383861 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
RNU1-28P-201ENST00000383861 RIMS1Q86UR5 1692 aaKnown RBP12.45□□□□□ -0.42
RNU1-28P-201ENST00000383861 LAMC1P11047 1609 aa12.44□□□□□ -0.42
RNU1-28P-201ENST00000383861 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
RNU1-28P-201ENST00000383861 PPLO60437 1756 aa12.44□□□□□ -0.42
RNU1-28P-201ENST00000383861 THEMISQ8N1K5 641 aaPredicted RBP12.44□□□□□ -0.42
RNU1-28P-201ENST00000383861 HSPA5P11021 654 aaKnown RBP12.43□□□□□ -0.42
RNU1-28P-201ENST00000383861 C14orf93Q9H972 538 aaKnown RBP12.43□□□□□ -0.42
RNU1-28P-201ENST00000383861 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
RNU1-28P-201ENST00000383861 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
RNU1-28P-201ENST00000383861 USP47Q96K76 1375 aa12.43□□□□□ -0.42
RNU1-28P-201ENST00000383861 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
RNU1-28P-201ENST00000383861 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
RNU1-28P-201ENST00000383861 TMEM2Q9UHN6 1383 aa12.41□□□□□ -0.42
RNU1-28P-201ENST00000383861 PTPRMP28827 1452 aa12.4□□□□□ -0.42
RNU1-28P-201ENST00000383861 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
RNU1-28P-201ENST00000383861 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
RNU1-28P-201ENST00000383861 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
RNU1-28P-201ENST00000383861 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
RNU1-28P-201ENST00000383861 EIF3AQ14152 1382 aaKnown RBP12.4□□□□□ -0.42
RNU1-28P-201ENST00000383861 UBR1Q8IWV7 1749 aa12.39□□□□□ -0.43
RNU1-28P-201ENST00000383861 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
RNU1-28P-201ENST00000383861 SLIT1O75093 1534 aa12.37□□□□□ -0.43
RNU1-28P-201ENST00000383861 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
RNU1-28P-201ENST00000383861 MYO5BQ9ULV0 1848 aa12.37□□□□□ -0.43
RNU1-28P-201ENST00000383861 CEP170BQ9Y4F5 1589 aaPredicted RBP12.36□□□□□ -0.43
RNU1-28P-201ENST00000383861 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
RNU1-28P-201ENST00000383861 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
RNU1-28P-201ENST00000383861 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
RNU1-28P-201ENST00000383861 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
RNU1-28P-201ENST00000383861 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
RNU1-28P-201ENST00000383861 HIRIP3Q9BW71 556 aaPredicted RBP12.35□□□□□ -0.43
RNU1-28P-201ENST00000383861 SETD1BQ9UPS6 1966 aaKnown RBP12.35□□□□□ -0.43
RNU1-28P-201ENST00000383861 PLEKHG1Q9ULL1 1385 aa12.34□□□□□ -0.43
RNU1-28P-201ENST00000383861 ZNF142P52746 1687 aaPredicted RBP12.34□□□□□ -0.43
RNU1-28P-201ENST00000383861 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
RNU1-28P-201ENST00000383861 ALKQ9UM73 1620 aa12.33□□□□□ -0.44
RNU1-28P-201ENST00000383861 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
RNU1-28P-201ENST00000383861 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
RNU1-28P-201ENST00000383861 TMF1P82094 1093 aa12.32□□□□□ -0.44
RNU1-28P-201ENST00000383861 ANKLE2Q86XL3 938 aa12.32□□□□□ -0.44
RNU1-28P-201ENST00000383861 BCANQ96GW7 911 aa12.32□□□□□ -0.44
RNU1-28P-201ENST00000383861 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 KDM4FA0A1W2PPD8 638 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 LTKP29376 864 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 TMEM132EQ6IEE7 984 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 TBX22Q9Y458 520 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 WASHC2AQ641Q2 1341 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
RNU1-28P-201ENST00000383861 SIRT1Q96EB6 747 aa12.29□□□□□ -0.44
RNU1-28P-201ENST00000383861 TESK2Q96S53 571 aa12.29□□□□□ -0.44
RNU1-28P-201ENST00000383861 TRAK1Q9UPV9 953 aa12.29□□□□□ -0.44
RNU1-28P-201ENST00000383861 LRPPRCP42704 1394 aaKnown RBP12.29□□□□□ -0.44
RNU1-28P-201ENST00000383861 YTHDC2Q9H6S0 1430 aaKnown RBP12.28□□□□□ -0.44
RNU1-28P-201ENST00000383861 DIP2AQ14689 1571 aa12.28□□□□□ -0.44
RNU1-28P-201ENST00000383861 KIF7Q2M1P5 1343 aa12.28□□□□□ -0.44
RNU1-28P-201ENST00000383861 ABCC11Q96J66 1382 aa12.28□□□□□ -0.44
RNU1-28P-201ENST00000383861 DDX10Q13206 875 aaKnown RBP12.27□□□□□ -0.45
RNU1-28P-201ENST00000383861 DLC1Q96QB1 1528 aa12.27□□□□□ -0.45
RNU1-28P-201ENST00000383861 POLR1AO95602 1720 aaPredicted RBP12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 PUS7Q96PZ0 661 aaKnown RBP12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 PIK3R4Q99570 1358 aa12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 ADAMTS13Q76LX8 1427 aa12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 MED14O60244 1454 aa12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 NRXN3Q9Y4C0 1643 aa12.26□□□□□ -0.45
RNU1-28P-201ENST00000383861 POGKQ9P215 609 aa12.25□□□□□ -0.45
RNU1-28P-201ENST00000383861 STK26Q9P289 416 aa12.25□□□□□ -0.45
RNU1-28P-201ENST00000383861 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
RNU1-28P-201ENST00000383861 METP08581 1390 aa12.24□□□□□ -0.45
RNU1-28P-201ENST00000383861 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
RNU1-28P-201ENST00000383861 TECPR2O15040 1411 aa12.23□□□□□ -0.45
RNU1-28P-201ENST00000383861 FAM135BQ49AJ0 1406 aa12.23□□□□□ -0.45
RNU1-28P-201ENST00000383861 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
RNU1-28P-201ENST00000383861 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
RNU1-28P-201ENST00000383861 SLC26A8Q96RN1 970 aa12.22□□□□□ -0.45
RNU1-28P-201ENST00000383861 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
RNU1-28P-201ENST00000383861 SENP3Q9H4L4 574 aaPredicted RBP12.22□□□□□ -0.45
RNU1-28P-201ENST00000383861 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
RNU1-28P-201ENST00000383861 DISP3Q9P2K9 1392 aa12.21□□□□□ -0.45
RNU1-28P-201ENST00000383861 ARHGEF28Q8N1W1 1705 aaKnown RBP12.21□□□□□ -0.45
RNU1-28P-201ENST00000383861 KNDC1Q76NI1 1749 aa12.2□□□□□ -0.46
RNU1-28P-201ENST00000383861 QRICH2Q9H0J4 1663 aa12.19□□□□□ -0.46
RNU1-28P-201ENST00000383861 ANP32CO43423 234 aa12.19□□□□□ -0.46
RNU1-28P-201ENST00000383861 AMOTL2Q9Y2J4 779 aa12.19□□□□□ -0.46
RNU1-28P-201ENST00000383861 CPS1P31327 1500 aa12.19□□□□□ -0.46
RNU1-28P-201ENST00000383861 PTCH1Q13635 1447 aa12.18□□□□□ -0.46
RNU1-28P-201ENST00000383861 NCKAP5LQ9HCH0 1330 aa12.17□□□□□ -0.46
RNU1-28P-201ENST00000383861 NINLQ9Y2I6 1382 aa12.17□□□□□ -0.46
RNU1-28P-201ENST00000383861 ATAD2Q6PL18 1390 aa12.16□□□□□ -0.46
RNU1-28P-201ENST00000383861 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
RNU1-28P-201ENST00000383861 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
RNU1-28P-201ENST00000383861 PTPRUQ92729 1446 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms