RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CAMSAP1Q5T5Y3 1602 aa12.04□□□□□ -0.48
GPNMB-202ENST00000381990 NOP58Q9Y2X3 529 aaKnown RBP12.04□□□□□ -0.48
GPNMB-202ENST00000381990 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
GPNMB-202ENST00000381990 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
GPNMB-202ENST00000381990 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
GPNMB-202ENST00000381990 MYOM2P54296 1465 aa12.03□□□□□ -0.48
GPNMB-202ENST00000381990 B4GALNT3Q6L9W6 998 aa12.03□□□□□ -0.48
GPNMB-202ENST00000381990 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
GPNMB-202ENST00000381990 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.48
GPNMB-202ENST00000381990 FAM9BQ8IZU0 186 aa12.02□□□□□ -0.48
GPNMB-202ENST00000381990 IFT172Q9UG01 1749 aa12.02□□□□□ -0.48
GPNMB-202ENST00000381990 CFAP65Q6ZU64 1925 aaKnown RBP12.02□□□□□ -0.49
GPNMB-202ENST00000381990 ADGRB3O60242 1522 aa12.02□□□□□ -0.49
GPNMB-202ENST00000381990 CCDC184Q52MB2 194 aa12.02□□□□□ -0.49
GPNMB-202ENST00000381990 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.49
GPNMB-202ENST00000381990 ARHGAP31Q2M1Z3 1444 aa12.02□□□□□ -0.49
GPNMB-202ENST00000381990 MROH2AA6NES4 1674 aa12.01□□□□□ -0.49
GPNMB-202ENST00000381990 NOS1P29475 1434 aa12.01□□□□□ -0.49
GPNMB-202ENST00000381990 IQGAP1P46940 1657 aa12.01□□□□□ -0.49
GPNMB-202ENST00000381990 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
GPNMB-202ENST00000381990 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
GPNMB-202ENST00000381990 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
GPNMB-202ENST00000381990 TESK2Q96S53 571 aa12□□□□□ -0.49
GPNMB-202ENST00000381990 SIGLEC1Q9BZZ2 1709 aa11.99□□□□□ -0.49
GPNMB-202ENST00000381990 SCAF11Q99590 1463 aaKnown RBP11.99□□□□□ -0.49
GPNMB-202ENST00000381990 NRXN1Q9ULB1 1477 aa11.98□□□□□ -0.49
GPNMB-202ENST00000381990 PIK3C2BO00750 1634 aa11.98□□□□□ -0.49
GPNMB-202ENST00000381990 AGLP35573 1532 aa11.98□□□□□ -0.49
GPNMB-202ENST00000381990 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
GPNMB-202ENST00000381990 SYNMO15061 1565 aa11.97□□□□□ -0.49
GPNMB-202ENST00000381990 TMF1P82094 1093 aa11.97□□□□□ -0.49
GPNMB-202ENST00000381990 NUDCQ9Y266 331 aa11.97□□□□□ -0.49
GPNMB-202ENST00000381990 ADGRF5Q8IZF2 1346 aa11.97□□□□□ -0.49
GPNMB-202ENST00000381990 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
GPNMB-202ENST00000381990 PPLO60437 1756 aa11.96□□□□□ -0.49
GPNMB-202ENST00000381990 DISP3Q9P2K9 1392 aa11.96□□□□□ -0.49
GPNMB-202ENST00000381990 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.49
GPNMB-202ENST00000381990 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.5
GPNMB-202ENST00000381990 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
GPNMB-202ENST00000381990 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
GPNMB-202ENST00000381990 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
GPNMB-202ENST00000381990 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
GPNMB-202ENST00000381990 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
GPNMB-202ENST00000381990 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
GPNMB-202ENST00000381990 SLC52A1Q9NWF4 448 aa11.93□□□□□ -0.5
GPNMB-202ENST00000381990 ARHGEF40Q8TER5 1519 aa11.93□□□□□ -0.5
GPNMB-202ENST00000381990 SETBP1Q9Y6X0 1596 aa11.93□□□□□ -0.5
GPNMB-202ENST00000381990 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
GPNMB-202ENST00000381990 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
GPNMB-202ENST00000381990 CDCA8Q53HL2 280 aa11.91□□□□□ -0.5
GPNMB-202ENST00000381990 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
GPNMB-202ENST00000381990 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-202ENST00000381990 IDI1Q13907 227 aa11.9□□□□□ -0.5
GPNMB-202ENST00000381990 RALBP1Q15311 655 aa11.9□□□□□ -0.5
GPNMB-202ENST00000381990 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
GPNMB-202ENST00000381990 NEXMIFQ5QGS0 1516 aa11.9□□□□□ -0.5
GPNMB-202ENST00000381990 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
GPNMB-202ENST00000381990 PER1O15534 1290 aaPredicted RBP11.9□□□□□ -0.51
GPNMB-202ENST00000381990 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
GPNMB-202ENST00000381990 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-202ENST00000381990 NBR1Q14596 966 aa11.89□□□□□ -0.51
GPNMB-202ENST00000381990 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
GPNMB-202ENST00000381990 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
GPNMB-202ENST00000381990 CNGB1Q14028 1251 aaPredicted RBP11.88□□□□□ -0.51
GPNMB-202ENST00000381990 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
GPNMB-202ENST00000381990 CLTCQ00610 1675 aaKnown RBP11.88□□□□□ -0.51
GPNMB-202ENST00000381990 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
GPNMB-202ENST00000381990 PANK3Q9H999 370 aa11.88□□□□□ -0.51
GPNMB-202ENST00000381990 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
GPNMB-202ENST00000381990 MYBBP1AQ9BQG0 1328 aaKnown RBP11.88□□□□□ -0.51
GPNMB-202ENST00000381990 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
GPNMB-202ENST00000381990 PARD3Q8TEW0 1356 aa11.87□□□□□ -0.51
GPNMB-202ENST00000381990 MYO5BQ9ULV0 1848 aa11.86□□□□□ -0.51
GPNMB-202ENST00000381990 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-202ENST00000381990 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
GPNMB-202ENST00000381990 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
GPNMB-202ENST00000381990 PNISRQ8TF01 805 aaKnown RBP11.85□□□□□ -0.51
GPNMB-202ENST00000381990 USP35Q9P2H5 1018 aa11.85□□□□□ -0.51
GPNMB-202ENST00000381990 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
GPNMB-202ENST00000381990 SPATA31D1Q6ZQQ2 1576 aa11.85□□□□□ -0.51
GPNMB-202ENST00000381990 CENPJQ9HC77 1338 aaPredicted RBP11.84□□□□□ -0.51
GPNMB-202ENST00000381990 LRPPRCP42704 1394 aaKnown RBP11.84□□□□□ -0.51
GPNMB-202ENST00000381990 MYOM1P52179 1685 aa11.84□□□□□ -0.51
GPNMB-202ENST00000381990 TCERG1O14776 1098 aaKnown RBP11.84□□□□□ -0.51
GPNMB-202ENST00000381990 MLECQ14165 292 aa11.84□□□□□ -0.51
GPNMB-202ENST00000381990 NLRP13Q86W25 1043 aa11.83□□□□□ -0.52
GPNMB-202ENST00000381990 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
GPNMB-202ENST00000381990 TMEM132EQ6IEE7 984 aa11.82□□□□□ -0.52
GPNMB-202ENST00000381990 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
GPNMB-202ENST00000381990 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
GPNMB-202ENST00000381990 MS4A1P11836 297 aa11.81□□□□□ -0.52
GPNMB-202ENST00000381990 ESF1Q9H501 851 aaKnown RBP11.81□□□□□ -0.52
GPNMB-202ENST00000381990 KNSTRNQ9Y448 316 aa11.81□□□□□ -0.52
GPNMB-202ENST00000381990 CC2D1BQ5T0F9 858 aaKnown RBP11.8□□□□□ -0.52
GPNMB-202ENST00000381990 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
GPNMB-202ENST00000381990 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
GPNMB-202ENST00000381990 PDE3BQ13370 1112 aa11.79□□□□□ -0.52
GPNMB-202ENST00000381990 ARHGEF28Q8N1W1 1705 aaKnown RBP11.79□□□□□ -0.52
GPNMB-202ENST00000381990 ASXL1Q8IXJ9 1541 aa11.79□□□□□ -0.52
GPNMB-202ENST00000381990 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms