RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 TRAK2O60296 914 aa15.44■□□□□ 0.06
SHOX-203ENST00000381578 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
SHOX-203ENST00000381578 SEC24BO95487 1268 aa15.43■□□□□ 0.06
SHOX-203ENST00000381578 ABCC10Q5T3U5 1492 aa15.42■□□□□ 0.06
SHOX-203ENST00000381578 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
SHOX-203ENST00000381578 DHX29Q7Z478 1369 aaKnown RBP15.42■□□□□ 0.06
SHOX-203ENST00000381578 ANKRD30BQ9BXX2 1392 aa15.42■□□□□ 0.06
SHOX-203ENST00000381578 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
SHOX-203ENST00000381578 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
SHOX-203ENST00000381578 XRCC6P12956 609 aaKnown RBP eCLIP15.41■□□□□ 0.06
SHOX-203ENST00000381578 CCDC141Q6ZP82 1450 aa15.41■□□□□ 0.06
SHOX-203ENST00000381578 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
SHOX-203ENST00000381578 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
SHOX-203ENST00000381578 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
SHOX-203ENST00000381578 KDM6BO15054 1643 aa15.38■□□□□ 0.05
SHOX-203ENST00000381578 PTMAP06454 111 aaKnown RBP15.38■□□□□ 0.05
SHOX-203ENST00000381578 IGHDP01880 384 aa15.38■□□□□ 0.05
SHOX-203ENST00000381578 PLEKHH2Q8IVE3 1493 aa15.37■□□□□ 0.05
SHOX-203ENST00000381578 ESPNB1AK53 854 aa15.37■□□□□ 0.05
SHOX-203ENST00000381578 TRHP20396 242 aaPredicted RBP15.37■□□□□ 0.05
SHOX-203ENST00000381578 MCM4P33991 863 aa15.37■□□□□ 0.05
SHOX-203ENST00000381578 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
SHOX-203ENST00000381578 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
SHOX-203ENST00000381578 GCC2Q8IWJ2 1684 aa15.36■□□□□ 0.05
SHOX-203ENST00000381578 SHROOM2Q13796 1616 aa15.36■□□□□ 0.05
SHOX-203ENST00000381578 CHMP5Q9NZZ3 219 aa15.36■□□□□ 0.05
SHOX-203ENST00000381578 ADCY10Q96PN6 1610 aa15.35■□□□□ 0.05
SHOX-203ENST00000381578 MRE11P49959 708 aa15.35■□□□□ 0.05
SHOX-203ENST00000381578 KIAA1107Q9UPP5 1409 aa15.35■□□□□ 0.05
SHOX-203ENST00000381578 RRP9O43818 475 aaKnown RBP15.35■□□□□ 0.05
SHOX-203ENST00000381578 TBC1D2Q9BYX2 928 aa15.35■□□□□ 0.05
SHOX-203ENST00000381578 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
SHOX-203ENST00000381578 SYCP2Q9BX26 1530 aa15.34■□□□□ 0.05
SHOX-203ENST00000381578 KIF3BO15066 747 aa15.34■□□□□ 0.05
SHOX-203ENST00000381578 PLCH2O75038 1416 aa15.34■□□□□ 0.05
SHOX-203ENST00000381578 GRPEL1Q9HAV7 217 aa15.34■□□□□ 0.05
SHOX-203ENST00000381578 GBP4Q96PP9 640 aa15.33■□□□□ 0.05
SHOX-203ENST00000381578 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.05
SHOX-203ENST00000381578 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
SHOX-203ENST00000381578 C22orf23Q9BZE7 217 aa15.33■□□□□ 0.04
SHOX-203ENST00000381578 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
SHOX-203ENST00000381578 PDZRN3Q9UPQ7 1066 aa15.33■□□□□ 0.04
SHOX-203ENST00000381578 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
SHOX-203ENST00000381578 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
SHOX-203ENST00000381578 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
SHOX-203ENST00000381578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.32■□□□□ 0.04
SHOX-203ENST00000381578 DUSP27Q5VZP5 1158 aa15.32■□□□□ 0.04
SHOX-203ENST00000381578 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
SHOX-203ENST00000381578 CGNL1Q0VF96 1302 aa15.32■□□□□ 0.04
SHOX-203ENST00000381578 PLCB2Q00722 1185 aa15.32■□□□□ 0.04
SHOX-203ENST00000381578 KIAA1211Q6ZU35 1233 aa15.31■□□□□ 0.04
SHOX-203ENST00000381578 DDX49Q9Y6V7 483 aaKnown RBP15.31■□□□□ 0.04
SHOX-203ENST00000381578 ADGRL2O95490 1459 aa15.31■□□□□ 0.04
SHOX-203ENST00000381578 KDM5BQ9UGL1 1544 aa15.31■□□□□ 0.04
SHOX-203ENST00000381578 UHRF1BP1LA0JNW5 1464 aa15.31■□□□□ 0.04
SHOX-203ENST00000381578 DDX11L8A8MPP1 907 aa15.3■□□□□ 0.04
SHOX-203ENST00000381578 ASXL2Q76L83 1435 aa15.3■□□□□ 0.04
SHOX-203ENST00000381578 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
SHOX-203ENST00000381578 SHANK2Q9UPX8 1470 aa15.3■□□□□ 0.04
SHOX-203ENST00000381578 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
SHOX-203ENST00000381578 RPRD2Q5VT52 1461 aaKnown RBP15.3■□□□□ 0.04
SHOX-203ENST00000381578 TTC37Q6PGP7 1564 aa15.29■□□□□ 0.04
SHOX-203ENST00000381578 MBD5Q9P267 1494 aa15.29■□□□□ 0.04
SHOX-203ENST00000381578 E9PSI1 815 aa15.29■□□□□ 0.04
SHOX-203ENST00000381578 U2SURPO15042 1029 aaKnown RBP15.28■□□□□ 0.04
SHOX-203ENST00000381578 SLC24A1O60721 1099 aa15.28■□□□□ 0.04
SHOX-203ENST00000381578 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
SHOX-203ENST00000381578 KANK1Q14678 1352 aa15.28■□□□□ 0.04
SHOX-203ENST00000381578 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
SHOX-203ENST00000381578 SAMD9LQ8IVG5 1584 aa15.27■□□□□ 0.04
SHOX-203ENST00000381578 CCDC144AA2RUR9 1427 aa15.27■□□□□ 0.04
SHOX-203ENST00000381578 GGT6Q6P531 493 aa15.27■□□□□ 0.03
SHOX-203ENST00000381578 PZPP20742 1482 aa15.27■□□□□ 0.03
SHOX-203ENST00000381578 APBB1O00213 710 aa15.27■□□□□ 0.03
SHOX-203ENST00000381578 CLCN1P35523 988 aa15.27■□□□□ 0.03
SHOX-203ENST00000381578 MPNDQ8N594 471 aa15.27■□□□□ 0.03
SHOX-203ENST00000381578 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
SHOX-203ENST00000381578 ADGBQ8N7X0 1667 aa15.26■□□□□ 0.03
SHOX-203ENST00000381578 FANCAO15360 1455 aa15.26■□□□□ 0.03
SHOX-203ENST00000381578 CDCA8Q53HL2 280 aa15.26■□□□□ 0.03
SHOX-203ENST00000381578 SMC4Q9NTJ3 1288 aa15.26■□□□□ 0.03
SHOX-203ENST00000381578 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
SHOX-203ENST00000381578 FOXD4L6Q3SYB3 417 aaPredicted RBP15.25■□□□□ 0.03
SHOX-203ENST00000381578 FOXD4L3Q6VB84 417 aaPredicted RBP15.25■□□□□ 0.03
SHOX-203ENST00000381578 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
SHOX-203ENST00000381578 SLFN5Q08AF3 891 aa15.25■□□□□ 0.03
SHOX-203ENST00000381578 MORC1Q86VD1 984 aa15.25■□□□□ 0.03
SHOX-203ENST00000381578 NASPP49321 788 aaPredicted RBP15.24■□□□□ 0.03
SHOX-203ENST00000381578 LNPKQ9C0E8 428 aa15.24■□□□□ 0.03
SHOX-203ENST00000381578 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
SHOX-203ENST00000381578 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
SHOX-203ENST00000381578 MYO5CQ9NQX4 1742 aa15.24■□□□□ 0.03
SHOX-203ENST00000381578 U2AF1L5P0DN76 240 aaPredicted RBP15.24■□□□□ 0.03
SHOX-203ENST00000381578 U2AF1Q01081 240 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHOX-203ENST00000381578 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
SHOX-203ENST00000381578 TNNQ9UQP3 1299 aa15.23■□□□□ 0.03
SHOX-203ENST00000381578 ARHGEF5Q12774 1597 aa15.23■□□□□ 0.03
SHOX-203ENST00000381578 CALD1Q05682 793 aaKnown RBP15.23■□□□□ 0.03
SHOX-203ENST00000381578 ADGRL1O94910 1474 aa15.23■□□□□ 0.03
SHOX-203ENST00000381578 CD109Q6YHK3 1445 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms