RNA–Protein interactions for RNA: ENST00000380232.3

IFNB1-201, Transcript of interferon beta 1, humanhuman

APPRIS P1 BASIC

Gene IFNB1, Length 859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1-201ENST00000380232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
IFNB1-201ENST00000380232 APLP1P51693 650 aa13.51□□□□□ -0.25
IFNB1-201ENST00000380232 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
IFNB1-201ENST00000380232 KCNC4Q03721 635 aa13.47□□□□□ -0.25
IFNB1-201ENST00000380232 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
IFNB1-201ENST00000380232 NLRP7Q8WX94 980 aa13.45□□□□□ -0.26
IFNB1-201ENST00000380232 MTRQ99707 1265 aa13.45□□□□□ -0.26
IFNB1-201ENST00000380232 TJAP1Q5JTD0 557 aa13.44□□□□□ -0.26
IFNB1-201ENST00000380232 PHOX2BQ99453 314 aa13.44□□□□□ -0.26
IFNB1-201ENST00000380232 A0A0G2JS52 829 aa13.43□□□□□ -0.26
IFNB1-201ENST00000380232 MAP2K5Q13163 448 aa13.43□□□□□ -0.26
IFNB1-201ENST00000380232 SLC10A3P09131 477 aa13.41□□□□□ -0.26
IFNB1-201ENST00000380232 CFHP08603 1231 aa13.4□□□□□ -0.26
IFNB1-201ENST00000380232 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
IFNB1-201ENST00000380232 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
IFNB1-201ENST00000380232 IRF6O14896 467 aa13.38□□□□□ -0.27
IFNB1-201ENST00000380232 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
IFNB1-201ENST00000380232 COPS2P61201 443 aa13.38□□□□□ -0.27
IFNB1-201ENST00000380232 DAXXQ9UER7 740 aaPredicted RBP13.38□□□□□ -0.27
IFNB1-201ENST00000380232 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
IFNB1-201ENST00000380232 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
IFNB1-201ENST00000380232 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
IFNB1-201ENST00000380232 PCDHB3Q9Y5E6 796 aa13.36□□□□□ -0.27
IFNB1-201ENST00000380232 CCDC102AQ96A19 550 aa13.35□□□□□ -0.27
IFNB1-201ENST00000380232 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
IFNB1-201ENST00000380232 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
IFNB1-201ENST00000380232 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
IFNB1-201ENST00000380232 BLOC1S3Q6QNY0 202 aa13.33□□□□□ -0.28
IFNB1-201ENST00000380232 RDH13Q8NBN7 331 aa13.33□□□□□ -0.28
IFNB1-201ENST00000380232 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
IFNB1-201ENST00000380232 NKX2-3Q8TAU0 364 aa13.3□□□□□ -0.28
IFNB1-201ENST00000380232 ZMYND10O75800 440 aa13.29□□□□□ -0.28
IFNB1-201ENST00000380232 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
IFNB1-201ENST00000380232 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
IFNB1-201ENST00000380232 ZPR1O75312 459 aa13.28□□□□□ -0.28
IFNB1-201ENST00000380232 MDM2Q00987 491 aaPredicted RBP13.28□□□□□ -0.28
IFNB1-201ENST00000380232 BARGINQ6ZT62 677 aa13.28□□□□□ -0.28
IFNB1-201ENST00000380232 RGS20O76081 388 aa13.26□□□□□ -0.29
IFNB1-201ENST00000380232 TLL1O43897 1013 aa13.23□□□□□ -0.29
IFNB1-201ENST00000380232 PUS10Q3MIT2 529 aaKnown RBP13.23□□□□□ -0.29
IFNB1-201ENST00000380232 PPP1R18Q6NYC8 613 aa13.23□□□□□ -0.29
IFNB1-201ENST00000380232 GCGRP47871 477 aa13.22□□□□□ -0.29
IFNB1-201ENST00000380232 NR1I2O75469 434 aa13.21□□□□□ -0.29
IFNB1-201ENST00000380232 FUT2Q10981 343 aa13.2□□□□□ -0.3
IFNB1-201ENST00000380232 CD46P15529 392 aa13.19□□□□□ -0.3
IFNB1-201ENST00000380232 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
IFNB1-201ENST00000380232 CLCN1P35523 988 aa13.18□□□□□ -0.3
IFNB1-201ENST00000380232 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
IFNB1-201ENST00000380232 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
IFNB1-201ENST00000380232 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
IFNB1-201ENST00000380232 MORN1Q5T089 497 aa13.16□□□□□ -0.3
IFNB1-201ENST00000380232 TMUB1Q9BVT8 246 aa13.16□□□□□ -0.3
IFNB1-201ENST00000380232 GGCXP38435 758 aa13.15□□□□□ -0.3
IFNB1-201ENST00000380232 BCANQ96GW7 911 aa13.15□□□□□ -0.3
IFNB1-201ENST00000380232 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
IFNB1-201ENST00000380232 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
IFNB1-201ENST00000380232 ADH1BP00325 375 aa13.13□□□□□ -0.31
IFNB1-201ENST00000380232 TTLL12Q14166 644 aaPredicted RBP13.11□□□□□ -0.31
IFNB1-201ENST00000380232 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
IFNB1-201ENST00000380232 S1PR4O95977 384 aa13.1□□□□□ -0.31
IFNB1-201ENST00000380232 AMHR2Q16671 573 aa13.1□□□□□ -0.31
IFNB1-201ENST00000380232 KDM4AO75164 1064 aa13.09□□□□□ -0.31
IFNB1-201ENST00000380232 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
IFNB1-201ENST00000380232 PRKD2Q9BZL6 878 aa13.09□□□□□ -0.31
IFNB1-201ENST00000380232 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
IFNB1-201ENST00000380232 AK7Q96M32 723 aa13.08□□□□□ -0.32
IFNB1-201ENST00000380232 SPSB2Q99619 263 aa13.08□□□□□ -0.32
IFNB1-201ENST00000380232 TRIM66O15016 1216 aa13.07□□□□□ -0.32
IFNB1-201ENST00000380232 THAP11Q96EK4 314 aa13.07□□□□□ -0.32
IFNB1-201ENST00000380232 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
IFNB1-201ENST00000380232 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
IFNB1-201ENST00000380232 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
IFNB1-201ENST00000380232 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
IFNB1-201ENST00000380232 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
IFNB1-201ENST00000380232 USP46P62068 366 aa13.04□□□□□ -0.32
IFNB1-201ENST00000380232 HLA-CQ95604 372 aa13.04□□□□□ -0.32
IFNB1-201ENST00000380232 IRX2Q9BZI1 471 aaPredicted RBP13.04□□□□□ -0.32
IFNB1-201ENST00000380232 SLC24A3Q9HC58 644 aa13.04□□□□□ -0.32
IFNB1-201ENST00000380232 HOXA2O43364 376 aa13.02□□□□□ -0.33
IFNB1-201ENST00000380232 BRICD5Q6PL45 260 aa13.02□□□□□ -0.33
IFNB1-201ENST00000380232 RNF19BQ6ZMZ0 732 aa13.02□□□□□ -0.33
IFNB1-201ENST00000380232 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
IFNB1-201ENST00000380232 PARP9Q8IXQ6 854 aa13.02□□□□□ -0.33
IFNB1-201ENST00000380232 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
IFNB1-201ENST00000380232 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
IFNB1-201ENST00000380232 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
IFNB1-201ENST00000380232 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
IFNB1-201ENST00000380232 GUCA2AQ02747 115 aa12.99□□□□□ -0.33
IFNB1-201ENST00000380232 Q3C1V9 767 aa12.99□□□□□ -0.33
IFNB1-201ENST00000380232 EMID1Q96A84 441 aaPredicted RBP12.98□□□□□ -0.33
IFNB1-201ENST00000380232 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
IFNB1-201ENST00000380232 SLC19A1P41440 591 aa12.96□□□□□ -0.33
IFNB1-201ENST00000380232 PDE4DQ08499 809 aa12.95□□□□□ -0.34
IFNB1-201ENST00000380232 SPIRE2Q8WWL2 714 aa12.95□□□□□ -0.34
IFNB1-201ENST00000380232 BEGAINQ9BUH8 593 aa12.95□□□□□ -0.34
IFNB1-201ENST00000380232 MS4A1P11836 297 aa12.94□□□□□ -0.34
IFNB1-201ENST00000380232 MSS51Q4VC12 460 aa12.94□□□□□ -0.34
IFNB1-201ENST00000380232 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
IFNB1-201ENST00000380232 LIAT1Q6ZQX7 453 aa12.93□□□□□ -0.34
IFNB1-201ENST00000380232 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms