RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 FGD1P98174 961 aa9.06□□□□□ -0.96
DDX58-202ENST00000379883 SAMD9Q5K651 1589 aa9.06□□□□□ -0.96
DDX58-202ENST00000379883 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
DDX58-202ENST00000379883 CCDC39Q9UFE4 941 aa9.06□□□□□ -0.96
DDX58-202ENST00000379883 SASS6Q6UVJ0 657 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 PRDM4Q9UKN5 801 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 COG6Q9Y2V7 657 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
DDX58-202ENST00000379883 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 DDX49Q9Y6V7 483 aaKnown RBP9.05□□□□□ -0.96
DDX58-202ENST00000379883 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 PZPP20742 1482 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 NUP155O75694 1391 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 GAPVD1Q14C86 1478 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 PDE4CQ08493 712 aa9.05□□□□□ -0.96
DDX58-202ENST00000379883 GTPBP4Q9BZE4 634 aaKnown RBP9.05□□□□□ -0.96
DDX58-202ENST00000379883 EPRSP07814 1512 aaKnown RBP9.04□□□□□ -0.96
DDX58-202ENST00000379883 PTMAP06454 111 aaKnown RBP9.04□□□□□ -0.96
DDX58-202ENST00000379883 DNTTIP2Q5QJE6 756 aaKnown RBP9.04□□□□□ -0.96
DDX58-202ENST00000379883 SNX21Q969T3 373 aa9.04□□□□□ -0.96
DDX58-202ENST00000379883 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
DDX58-202ENST00000379883 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
DDX58-202ENST00000379883 CAMSAP2Q08AD1 1489 aa9.04□□□□□ -0.96
DDX58-202ENST00000379883 PPP2R1AP30153 589 aa9.04□□□□□ -0.96
DDX58-202ENST00000379883 CCDC94Q9BW85 323 aaPredicted RBP9.04□□□□□ -0.96
DDX58-202ENST00000379883 HMGN5P82970 282 aaKnown RBP9.03□□□□□ -0.96
DDX58-202ENST00000379883 ZNF500O60304 480 aaPredicted RBP9.03□□□□□ -0.96
DDX58-202ENST00000379883 BCAR3O75815 825 aa9.03□□□□□ -0.96
DDX58-202ENST00000379883 TNPO1Q92973 898 aaKnown RBP9.03□□□□□ -0.96
DDX58-202ENST00000379883 IBTKQ9P2D0 1353 aaPredicted RBP9.03□□□□□ -0.96
DDX58-202ENST00000379883 SMC5Q8IY18 1101 aa9.03□□□□□ -0.96
DDX58-202ENST00000379883 FTSJ3Q8IY81 847 aaKnown RBP9.03□□□□□ -0.96
DDX58-202ENST00000379883 NOL7Q9UMY1 257 aaKnown RBP9.03□□□□□ -0.96
DDX58-202ENST00000379883 PLEKHH1Q9ULM0 1364 aa9.02□□□□□ -0.96
DDX58-202ENST00000379883 KIF20AO95235 890 aa9.02□□□□□ -0.97
DDX58-202ENST00000379883 TSPY4P0CV99 314 aa9.02□□□□□ -0.97
DDX58-202ENST00000379883 TSPY10P0CW01 314 aa9.02□□□□□ -0.97
DDX58-202ENST00000379883 ZNF521Q96K83 1311 aa9.02□□□□□ -0.97
DDX58-202ENST00000379883 NESP48681 1621 aa9.02□□□□□ -0.97
DDX58-202ENST00000379883 KLHL40Q2TBA0 621 aa9.02□□□□□ -0.97
DDX58-202ENST00000379883 LETM1O95202 739 aaPredicted RBP9.02□□□□□ -0.97
DDX58-202ENST00000379883 TRMT2AQ8IZ69 625 aaKnown RBP9.02□□□□□ -0.97
DDX58-202ENST00000379883 ZNF777Q9ULD5 760 aaPredicted RBP9.02□□□□□ -0.97
DDX58-202ENST00000379883 ERBINQ96RT1 1412 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 CDK11BP21127 795 aaKnown RBP9.01□□□□□ -0.97
DDX58-202ENST00000379883 KIAA2012Q0VF49 1180 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 RAB3GAP1Q15042 981 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 PANK1Q8TE04 598 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 ANKRD50Q9ULJ7 1429 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 DMTNQ08495 405 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 NUCB2P80303 420 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 CLASP1Q7Z460 1538 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 E9PCH4 1651 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 APAF1O14727 1248 aa9.01□□□□□ -0.97
DDX58-202ENST00000379883 DNMBPQ6XZF7 1577 aa9□□□□□ -0.97
DDX58-202ENST00000379883 RIPK4P57078 832 aa9□□□□□ -0.97
DDX58-202ENST00000379883 CHAF1AQ13111 956 aaPredicted RBP9□□□□□ -0.97
DDX58-202ENST00000379883 COL17A1Q9UMD9 1497 aaPredicted RBP9□□□□□ -0.97
DDX58-202ENST00000379883 VIRMAQ69YN4 1812 aaKnown RBP9□□□□□ -0.97
DDX58-202ENST00000379883 CHMP4BQ9H444 224 aaKnown RBP9□□□□□ -0.97
DDX58-202ENST00000379883 RAD54L2Q9Y4B4 1467 aa9□□□□□ -0.97
DDX58-202ENST00000379883 ARID3CA6NKF2 412 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 ZKSCAN5Q9Y2L8 839 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 MAGI3Q5TCQ9 1506 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 RBM25P49756 843 aaKnown RBP8.99□□□□□ -0.97
DDX58-202ENST00000379883 CCDC146Q8IYE0 955 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 FANCD2Q9BXW9 1451 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 NLRP1Q9C000 1473 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
DDX58-202ENST00000379883 PIK3C2GO75747 1445 aa8.98□□□□□ -0.97
DDX58-202ENST00000379883 ZHX1Q9UKY1 873 aaPredicted RBP8.98□□□□□ -0.97
DDX58-202ENST00000379883 ZNF445P59923 1031 aa8.98□□□□□ -0.97
DDX58-202ENST00000379883 SYAP1Q96A49 352 aaPredicted RBP8.98□□□□□ -0.97
DDX58-202ENST00000379883 ARID3AQ99856 593 aa8.98□□□□□ -0.97
DDX58-202ENST00000379883 K7ELQ4 463 aaPredicted RBP8.98□□□□□ -0.97
DDX58-202ENST00000379883 GAS2L3Q86XJ1 694 aa8.98□□□□□ -0.97
DDX58-202ENST00000379883 KIF16BQ96L93 1317 aa8.97□□□□□ -0.97
DDX58-202ENST00000379883 ADGRL2O95490 1459 aa8.97□□□□□ -0.97
DDX58-202ENST00000379883 ZKSCAN2Q63HK3 967 aa8.97□□□□□ -0.97
DDX58-202ENST00000379883 XPCQ01831 940 aaPredicted RBP8.97□□□□□ -0.97
DDX58-202ENST00000379883 BBXQ8WY36 941 aaPredicted RBP8.97□□□□□ -0.97
DDX58-202ENST00000379883 POLA1P09884 1462 aaPredicted RBP8.97□□□□□ -0.97
DDX58-202ENST00000379883 ZNF644Q9H582 1327 aaPredicted RBP8.97□□□□□ -0.97
DDX58-202ENST00000379883 ZNF608Q9ULD9 1512 aaPredicted RBP8.96□□□□□ -0.98
DDX58-202ENST00000379883 PHF14O94880 888 aa8.96□□□□□ -0.98
DDX58-202ENST00000379883 RGL3Q3MIN7 710 aa8.96□□□□□ -0.98
DDX58-202ENST00000379883 DDX19BQ9UMR2 479 aa8.96□□□□□ -0.98
DDX58-202ENST00000379883 GPRASP1Q5JY77 1395 aa8.96□□□□□ -0.98
DDX58-202ENST00000379883 PRAG1Q86YV5 1406 aa8.96□□□□□ -0.98
DDX58-202ENST00000379883 ABCC2Q92887 1545 aa8.96□□□□□ -0.98
DDX58-202ENST00000379883 CT47B1P0C2W7 299 aaPredicted RBP8.95□□□□□ -0.98
DDX58-202ENST00000379883 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
DDX58-202ENST00000379883 MVPQ14764 893 aaKnown RBP8.95□□□□□ -0.98
DDX58-202ENST00000379883 CWC22Q9HCG8 908 aaKnown RBP8.95□□□□□ -0.98
DDX58-202ENST00000379883 CDK13Q14004 1512 aaKnown RBP8.95□□□□□ -0.98
DDX58-202ENST00000379883 CAVIN1Q6NZI2 390 aaKnown RBP8.95□□□□□ -0.98
DDX58-202ENST00000379883 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
DDX58-202ENST00000379883 DZIP1LQ8IYY4 767 aaKnown RBP8.95□□□□□ -0.98
DDX58-202ENST00000379883 ADGBQ8N7X0 1667 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms