RNA–Protein interactions for RNA: ENST00000379751.4

CENPB-201, Transcript of centromere protein B, humanhuman

APPRIS P1 BASIC

Gene CENPB, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPB-201ENST00000379751 CNGB1Q14028 1251 aaPredicted RBP29.29■■■□□ 2.28
CENPB-201ENST00000379751 IDI1Q13907 227 aa29.29■■■□□ 2.28
CENPB-201ENST00000379751 FBXO31Q5XUX0 539 aaPredicted RBP29.27■■■□□ 2.28
CENPB-201ENST00000379751 SCAF11Q99590 1463 aaKnown RBP29.27■■■□□ 2.28
CENPB-201ENST00000379751 PIK3C2BO00750 1634 aa29.27■■■□□ 2.28
CENPB-201ENST00000379751 SLC52A1Q9NWF4 448 aa29.26■■■□□ 2.28
CENPB-201ENST00000379751 PPP6R1Q9UPN7 881 aa29.26■■■□□ 2.28
CENPB-201ENST00000379751 TRHP20396 242 aaPredicted RBP29.26■■■□□ 2.27
CENPB-201ENST00000379751 DISP3Q9P2K9 1392 aa29.25■■■□□ 2.27
CENPB-201ENST00000379751 TMF1P82094 1093 aa29.25■■■□□ 2.27
CENPB-201ENST00000379751 RPGRIP1LQ68CZ1 1315 aa29.25■■■□□ 2.27
CENPB-201ENST00000379751 PREX1Q8TCU6 1659 aa29.24■■■□□ 2.27
CENPB-201ENST00000379751 IQGAP1P46940 1657 aa29.24■■■□□ 2.27
CENPB-201ENST00000379751 KIAA1210Q9ULL0 1709 aa29.24■■■□□ 2.27
CENPB-201ENST00000379751 NRXN1Q9ULB1 1477 aa29.23■■■□□ 2.27
CENPB-201ENST00000379751 NUTM2DQ5VT03 806 aaPredicted RBP29.23■■■□□ 2.27
CENPB-201ENST00000379751 PPLO60437 1756 aa29.21■■■□□ 2.27
CENPB-201ENST00000379751 CLTCQ00610 1675 aaKnown RBP29.21■■■□□ 2.27
CENPB-201ENST00000379751 EIF3AQ14152 1382 aaKnown RBP29.2■■■□□ 2.27
CENPB-201ENST00000379751 ESF1Q9H501 851 aaKnown RBP29.2■■■□□ 2.27
CENPB-201ENST00000379751 ERVK-7P63135 1459 aa29.19■■■□□ 2.26
CENPB-201ENST00000379751 PIK3C2GO75747 1445 aa29.17■■■□□ 2.26
CENPB-201ENST00000379751 VGFO15240 615 aaPredicted RBP29.16■■■□□ 2.26
CENPB-201ENST00000379751 CCDC184Q52MB2 194 aa29.15■■■□□ 2.26
CENPB-201ENST00000379751 PELP1Q8IZL8 1130 aaKnown RBP29.15■■■□□ 2.26
CENPB-201ENST00000379751 GTF3C3Q9Y5Q9 886 aa29.15■■■□□ 2.26
CENPB-201ENST00000379751 STAG3Q9UJ98 1225 aa29.14■■■□□ 2.26
CENPB-201ENST00000379751 NEXMIFQ5QGS0 1516 aa29.13■■■□□ 2.25
CENPB-201ENST00000379751 C14orf93Q9H972 538 aaKnown RBP29.12■■■□□ 2.25
CENPB-201ENST00000379751 MRS2Q9HD23 443 aa29.12■■■□□ 2.25
CENPB-201ENST00000379751 SENP3Q9H4L4 574 aaPredicted RBP29.1■■■□□ 2.25
CENPB-201ENST00000379751 TMEM132EQ6IEE7 984 aa29.09■■■□□ 2.25
CENPB-201ENST00000379751 TMEM131LA2VDJ0 1609 aa29.08■■■□□ 2.25
CENPB-201ENST00000379751 TRAK1Q9UPV9 953 aa29.07■■■□□ 2.24
CENPB-201ENST00000379751 CDCA8Q53HL2 280 aa29.07■■■□□ 2.24
CENPB-201ENST00000379751 SETBP1Q9Y6X0 1596 aa29.06■■■□□ 2.24
CENPB-201ENST00000379751 MYO5BQ9ULV0 1848 aa29.06■■■□□ 2.24
CENPB-201ENST00000379751 ZMYM3Q14202 1370 aa29.05■■■□□ 2.24
CENPB-201ENST00000379751 PANK3Q9H999 370 aa29.04■■■□□ 2.24
CENPB-201ENST00000379751 SPATA31D1Q6ZQQ2 1576 aa29.04■■■□□ 2.24
CENPB-201ENST00000379751 FAM9BQ8IZU0 186 aa29.02■■■□□ 2.24
CENPB-201ENST00000379751 ADGRB1O14514 1584 aa29.01■■■□□ 2.24
CENPB-201ENST00000379751 CENPJQ9HC77 1338 aaPredicted RBP29■■■□□ 2.23
CENPB-201ENST00000379751 ZFYVE9O95405 1425 aa28.99■■■□□ 2.23
CENPB-201ENST00000379751 PER1O15534 1290 aaPredicted RBP28.98■■■□□ 2.23
CENPB-201ENST00000379751 SLC24A1O60721 1099 aa28.98■■■□□ 2.23
CENPB-201ENST00000379751 HNRNPUQ00839 825 aaKnown RBP eCLIP28.98■■■□□ 2.23
CENPB-201ENST00000379751 KTN1Q86UP2 1357 aaKnown RBP28.96■■■□□ 2.23
CENPB-201ENST00000379751 RALBP1Q15311 655 aa28.95■■■□□ 2.23
CENPB-201ENST00000379751 A2ML1A8K2U0 1454 aa28.93■■■□□ 2.22
CENPB-201ENST00000379751 CC2D1BQ5T0F9 858 aaKnown RBP28.93■■■□□ 2.22
CENPB-201ENST00000379751 MYO3AQ8NEV4 1616 aa28.92■■■□□ 2.22
CENPB-201ENST00000379751 MYBBP1AQ9BQG0 1328 aaKnown RBP28.91■■■□□ 2.22
CENPB-201ENST00000379751 SBNO2Q9Y2G9 1366 aa28.91■■■□□ 2.22
CENPB-201ENST00000379751 TMC1Q8TDI8 760 aa28.9■■■□□ 2.22
CENPB-201ENST00000379751 KDM5AP29375 1690 aaKnown RBP28.9■■■□□ 2.22
CENPB-201ENST00000379751 STK26Q9P289 416 aa28.9■■■□□ 2.22
CENPB-201ENST00000379751 TNRQ92752 1358 aa28.89■■■□□ 2.22
CENPB-201ENST00000379751 KNSTRNQ9Y448 316 aa28.88■■■□□ 2.21
CENPB-201ENST00000379751 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
CENPB-201ENST00000379751 RIMS2Q9UQ26 1411 aa28.87■■■□□ 2.21
CENPB-201ENST00000379751 PARD3Q8TEW0 1356 aa28.86■■■□□ 2.21
CENPB-201ENST00000379751 QRICH2Q9H0J4 1663 aa28.86■■■□□ 2.21
CENPB-201ENST00000379751 PLPPR3Q6T4P5 718 aa28.84■■■□□ 2.21
CENPB-201ENST00000379751 ASXL1Q8IXJ9 1541 aa28.84■■■□□ 2.21
CENPB-201ENST00000379751 SAFB2Q14151 953 aaKnown RBP eCLIP28.84■■■□□ 2.21
CENPB-201ENST00000379751 CEBPAP49715 358 aaPredicted RBP28.83■■■□□ 2.21
CENPB-201ENST00000379751 MYOM1P52179 1685 aa28.83■■■□□ 2.21
CENPB-201ENST00000379751 BRD4O60885 1362 aaPredicted RBP28.81■■■□□ 2.2
CENPB-201ENST00000379751 ARHGEF28Q8N1W1 1705 aaKnown RBP28.81■■■□□ 2.2
CENPB-201ENST00000379751 NLRP13Q86W25 1043 aa28.8■■■□□ 2.2
CENPB-201ENST00000379751 ALKQ9UM73 1620 aa28.8■■■□□ 2.2
CENPB-201ENST00000379751 YTHDC2Q9H6S0 1430 aaKnown RBP28.77■■■□□ 2.2
CENPB-201ENST00000379751 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.77■■■□□ 2.2
CENPB-201ENST00000379751 PNISRQ8TF01 805 aaKnown RBP28.76■■■□□ 2.2
CENPB-201ENST00000379751 EVC2Q86UK5 1308 aa28.75■■■□□ 2.19
CENPB-201ENST00000379751 AMER1Q5JTC6 1135 aaPredicted RBP28.74■■■□□ 2.19
CENPB-201ENST00000379751 POGKQ9P215 609 aa28.74■■■□□ 2.19
CENPB-201ENST00000379751 PRAM1Q96QH2 718 aa28.74■■■□□ 2.19
CENPB-201ENST00000379751 HDGFP51858 240 aaKnown RBP28.73■■■□□ 2.19
CENPB-201ENST00000379751 BCANQ96GW7 911 aa28.71■■■□□ 2.19
CENPB-201ENST00000379751 PTPRMP28827 1452 aa28.7■■■□□ 2.19
CENPB-201ENST00000379751 FER1L4A9Z1Z3 1794 aa28.7■■■□□ 2.19
CENPB-201ENST00000379751 SLC12A5Q9H2X9 1139 aa28.7■■■□□ 2.18
CENPB-201ENST00000379751 TULP4Q9NRJ4 1543 aa28.69■■■□□ 2.18
CENPB-201ENST00000379751 MINK1Q8N4C8 1332 aaPredicted RBP28.69■■■□□ 2.18
CENPB-201ENST00000379751 TMEM2Q9UHN6 1383 aa28.68■■■□□ 2.18
CENPB-201ENST00000379751 CARD14Q9BXL6 1004 aa28.68■■■□□ 2.18
CENPB-201ENST00000379751 CABP2Q9NPB3 220 aa28.67■■■□□ 2.18
CENPB-201ENST00000379751 C3P01024 1663 aa28.67■■■□□ 2.18
CENPB-201ENST00000379751 UBR1Q8IWV7 1749 aa28.67■■■□□ 2.18
CENPB-201ENST00000379751 NLRP1Q9C000 1473 aa28.67■■■□□ 2.18
CENPB-201ENST00000379751 ZBED9Q6R2W3 1325 aa28.66■■■□□ 2.18
CENPB-201ENST00000379751 SRPK2P78362 688 aaKnown RBP28.65■■■□□ 2.18
CENPB-201ENST00000379751 NPC1L1Q9UHC9 1359 aa28.63■■■□□ 2.17
CENPB-201ENST00000379751 SENP3-EIF4A1A0A087X0R7 540 aa28.62■■■□□ 2.17
CENPB-201ENST00000379751 LRPPRCP42704 1394 aaKnown RBP28.62■■■□□ 2.17
CENPB-201ENST00000379751 PUS7Q96PZ0 661 aaKnown RBP28.61■■■□□ 2.17
CENPB-201ENST00000379751 PPP2R1AP30153 589 aa28.61■■■□□ 2.17
CENPB-201ENST00000379751 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms