RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
SNCAIP-203ENST00000379538 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
SNCAIP-203ENST00000379538 PRDM15P57071 1507 aaPredicted RBP18.67■□□□□ 0.58
SNCAIP-203ENST00000379538 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
SNCAIP-203ENST00000379538 SIGLEC1Q9BZZ2 1709 aa18.66■□□□□ 0.58
SNCAIP-203ENST00000379538 NPATQ14207 1427 aa18.66■□□□□ 0.58
SNCAIP-203ENST00000379538 VWDEQ8N2E2 1590 aa18.65■□□□□ 0.58
SNCAIP-203ENST00000379538 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.57
SNCAIP-203ENST00000379538 CCDC7Q96M83 1385 aa18.64■□□□□ 0.57
SNCAIP-203ENST00000379538 AGLP35573 1532 aa18.64■□□□□ 0.57
SNCAIP-203ENST00000379538 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
SNCAIP-203ENST00000379538 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.63■□□□□ 0.57
SNCAIP-203ENST00000379538 TET3O43151 1660 aa18.61■□□□□ 0.57
SNCAIP-203ENST00000379538 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
SNCAIP-203ENST00000379538 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
SNCAIP-203ENST00000379538 ABCC3O15438 1527 aa18.6■□□□□ 0.57
SNCAIP-203ENST00000379538 PTPRTO14522 1441 aa18.59■□□□□ 0.57
SNCAIP-203ENST00000379538 EFCAB6Q5THR3 1501 aa18.59■□□□□ 0.57
SNCAIP-203ENST00000379538 ZC3H13Q5T200 1668 aaKnown RBP18.59■□□□□ 0.57
SNCAIP-203ENST00000379538 SPATA31E1Q6ZUB1 1445 aa18.58■□□□□ 0.57
SNCAIP-203ENST00000379538 IDI1Q13907 227 aa18.57■□□□□ 0.56
SNCAIP-203ENST00000379538 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
SNCAIP-203ENST00000379538 ROCK2O75116 1388 aaKnown RBP18.57■□□□□ 0.56
SNCAIP-203ENST00000379538 SPHKAPQ2M3C7 1700 aa18.57■□□□□ 0.56
SNCAIP-203ENST00000379538 ADGRF5Q8IZF2 1346 aa18.56■□□□□ 0.56
SNCAIP-203ENST00000379538 TRPM2O94759 1503 aa18.56■□□□□ 0.56
SNCAIP-203ENST00000379538 USP47Q96K76 1375 aa18.56■□□□□ 0.56
SNCAIP-203ENST00000379538 CEBPAP49715 358 aaPredicted RBP18.55■□□□□ 0.56
SNCAIP-203ENST00000379538 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
SNCAIP-203ENST00000379538 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
SNCAIP-203ENST00000379538 PRAG1Q86YV5 1406 aa18.55■□□□□ 0.56
SNCAIP-203ENST00000379538 SKAP1Q86WV1 359 aa18.54■□□□□ 0.56
SNCAIP-203ENST00000379538 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
SNCAIP-203ENST00000379538 NEFMP07197 916 aa18.52■□□□□ 0.56
SNCAIP-203ENST00000379538 SMG6Q86US8 1419 aaKnown RBP18.51■□□□□ 0.55
SNCAIP-203ENST00000379538 UHRF1BP1Q6BDS2 1440 aa18.51■□□□□ 0.55
SNCAIP-203ENST00000379538 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
SNCAIP-203ENST00000379538 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-203ENST00000379538 EXOC6Q8TAG9 804 aa18.48■□□□□ 0.55
SNCAIP-203ENST00000379538 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
SNCAIP-203ENST00000379538 RNF123Q5XPI4 1314 aa18.47■□□□□ 0.55
SNCAIP-203ENST00000379538 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
SNCAIP-203ENST00000379538 NOS1P29475 1434 aa18.47■□□□□ 0.55
SNCAIP-203ENST00000379538 MROH2AA6NES4 1674 aa18.46■□□□□ 0.55
SNCAIP-203ENST00000379538 RALGAPBQ86X10 1494 aa18.46■□□□□ 0.55
SNCAIP-203ENST00000379538 SYNMO15061 1565 aa18.45■□□□□ 0.54
SNCAIP-203ENST00000379538 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
SNCAIP-203ENST00000379538 CLTCQ00610 1675 aaKnown RBP18.44■□□□□ 0.54
SNCAIP-203ENST00000379538 ZMYM3Q14202 1370 aa18.43■□□□□ 0.54
SNCAIP-203ENST00000379538 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
SNCAIP-203ENST00000379538 PDE4AP27815 886 aa18.42■□□□□ 0.54
SNCAIP-203ENST00000379538 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
SNCAIP-203ENST00000379538 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-203ENST00000379538 TRPM1Q7Z4N2 1603 aa18.4■□□□□ 0.54
SNCAIP-203ENST00000379538 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
SNCAIP-203ENST00000379538 ARHGAP31Q2M1Z3 1444 aa18.39■□□□□ 0.53
SNCAIP-203ENST00000379538 KIF1BO60333 1816 aa18.39■□□□□ 0.53
SNCAIP-203ENST00000379538 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
SNCAIP-203ENST00000379538 NEURL4Q96JN8 1562 aa18.38■□□□□ 0.53
SNCAIP-203ENST00000379538 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNCAIP-203ENST00000379538 SLC52A1Q9NWF4 448 aa18.37■□□□□ 0.53
SNCAIP-203ENST00000379538 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 ERVK-7P63135 1459 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 PLIN1O60240 522 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 TESK2Q96S53 571 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 STK26Q9P289 416 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 ADGRB3O60242 1522 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 PREX1Q8TCU6 1659 aa18.36■□□□□ 0.53
SNCAIP-203ENST00000379538 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-203ENST00000379538 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
SNCAIP-203ENST00000379538 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
SNCAIP-203ENST00000379538 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
SNCAIP-203ENST00000379538 GPRASP1Q5JY77 1395 aa18.32■□□□□ 0.52
SNCAIP-203ENST00000379538 CDCA7LQ96GN5 454 aa18.32■□□□□ 0.52
SNCAIP-203ENST00000379538 PIK3C2BO00750 1634 aa18.3■□□□□ 0.52
SNCAIP-203ENST00000379538 TCERG1O14776 1098 aaKnown RBP18.3■□□□□ 0.52
SNCAIP-203ENST00000379538 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
SNCAIP-203ENST00000379538 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
SNCAIP-203ENST00000379538 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
SNCAIP-203ENST00000379538 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
SNCAIP-203ENST00000379538 ADAMTSL3P82987 1691 aa18.28■□□□□ 0.52
SNCAIP-203ENST00000379538 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-203ENST00000379538 PIK3C2GO75747 1445 aa18.27■□□□□ 0.51
SNCAIP-203ENST00000379538 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
SNCAIP-203ENST00000379538 TMEM131LA2VDJ0 1609 aa18.26■□□□□ 0.51
SNCAIP-203ENST00000379538 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-203ENST00000379538 TNRQ92752 1358 aa18.25■□□□□ 0.51
SNCAIP-203ENST00000379538 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
SNCAIP-203ENST00000379538 PPLO60437 1756 aa18.25■□□□□ 0.51
SNCAIP-203ENST00000379538 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
SNCAIP-203ENST00000379538 MYOM2P54296 1465 aa18.24■□□□□ 0.51
SNCAIP-203ENST00000379538 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-203ENST00000379538 A2ML1A8K2U0 1454 aa18.23■□□□□ 0.51
SNCAIP-203ENST00000379538 NFKBIBQ15653 356 aa18.23■□□□□ 0.51
SNCAIP-203ENST00000379538 USP35Q9P2H5 1018 aa18.23■□□□□ 0.51
SNCAIP-203ENST00000379538 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
SNCAIP-203ENST00000379538 GSE1Q14687 1217 aa18.23■□□□□ 0.51
SNCAIP-203ENST00000379538 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-203ENST00000379538 TMF1P82094 1093 aa18.22■□□□□ 0.51
SNCAIP-203ENST00000379538 NRXN1Q9ULB1 1477 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms