RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
POLR2J3-201ENST00000379340 MROH1Q8NDA8 1641 aa14.46□□□□□ -0.09
POLR2J3-201ENST00000379340 RNF17Q9BXT8 1623 aaKnown RBP14.46□□□□□ -0.09
POLR2J3-201ENST00000379340 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
POLR2J3-201ENST00000379340 ZMYM3Q14202 1370 aa14.46□□□□□ -0.1
POLR2J3-201ENST00000379340 NPATQ14207 1427 aa14.46□□□□□ -0.1
POLR2J3-201ENST00000379340 HSPA1LP34931 641 aa14.45□□□□□ -0.1
POLR2J3-201ENST00000379340 MED1Q15648 1581 aaPredicted RBP14.45□□□□□ -0.1
POLR2J3-201ENST00000379340 LMTK2Q8IWU2 1503 aa14.45□□□□□ -0.1
POLR2J3-201ENST00000379340 PRKRIP1Q9H875 184 aaPredicted RBP14.45□□□□□ -0.1
POLR2J3-201ENST00000379340 MROH2AA6NES4 1674 aa14.43□□□□□ -0.1
POLR2J3-201ENST00000379340 CLTCL1P53675 1640 aa14.42□□□□□ -0.1
POLR2J3-201ENST00000379340 MYO3AQ8NEV4 1616 aa14.42□□□□□ -0.1
POLR2J3-201ENST00000379340 EFCAB6Q5THR3 1501 aa14.42□□□□□ -0.1
POLR2J3-201ENST00000379340 CLTCQ00610 1675 aaKnown RBP14.41□□□□□ -0.1
POLR2J3-201ENST00000379340 ZNF142P52746 1687 aaPredicted RBP14.41□□□□□ -0.1
POLR2J3-201ENST00000379340 CEP170BQ9Y4F5 1589 aaPredicted RBP14.4□□□□□ -0.1
POLR2J3-201ENST00000379340 KIF3BO15066 747 aa14.4□□□□□ -0.1
POLR2J3-201ENST00000379340 PIP4K2BP78356 416 aa14.4□□□□□ -0.1
POLR2J3-201ENST00000379340 KIAA1210Q9ULL0 1709 aa14.4□□□□□ -0.1
POLR2J3-201ENST00000379340 RGL3Q3MIN7 710 aa14.39□□□□□ -0.11
POLR2J3-201ENST00000379340 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
POLR2J3-201ENST00000379340 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
POLR2J3-201ENST00000379340 KIF1BO60333 1816 aa14.38□□□□□ -0.11
POLR2J3-201ENST00000379340 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
POLR2J3-201ENST00000379340 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
POLR2J3-201ENST00000379340 MYOM2P54296 1465 aa14.35□□□□□ -0.11
POLR2J3-201ENST00000379340 ALKQ9UM73 1620 aa14.35□□□□□ -0.11
POLR2J3-201ENST00000379340 GGT6Q6P531 493 aa14.34□□□□□ -0.11
POLR2J3-201ENST00000379340 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
POLR2J3-201ENST00000379340 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
POLR2J3-201ENST00000379340 ZC3H13Q5T200 1668 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-201ENST00000379340 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
POLR2J3-201ENST00000379340 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
POLR2J3-201ENST00000379340 HNRNPUQ00839 825 aaKnown RBP eCLIP14.31□□□□□ -0.12
POLR2J3-201ENST00000379340 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
POLR2J3-201ENST00000379340 A2ML1A8K2U0 1454 aa14.31□□□□□ -0.12
POLR2J3-201ENST00000379340 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-201ENST00000379340 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
POLR2J3-201ENST00000379340 SCAF11Q99590 1463 aaKnown RBP14.3□□□□□ -0.12
POLR2J3-201ENST00000379340 TOM1O60784 492 aa14.3□□□□□ -0.12
POLR2J3-201ENST00000379340 ADGRB3O60242 1522 aa14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 TMF1P82094 1093 aa14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 RALBP1Q15311 655 aa14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 FBXO31Q5XUX0 539 aaPredicted RBP14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 TESK2Q96S53 571 aa14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 ABCC3O15438 1527 aa14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
POLR2J3-201ENST00000379340 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
POLR2J3-201ENST00000379340 CPS1P31327 1500 aa14.28□□□□□ -0.12
POLR2J3-201ENST00000379340 NRXN1Q9ULB1 1477 aa14.28□□□□□ -0.12
POLR2J3-201ENST00000379340 SLC24A1O60721 1099 aa14.27□□□□□ -0.12
POLR2J3-201ENST00000379340 NEFLP07196 543 aa14.27□□□□□ -0.12
POLR2J3-201ENST00000379340 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
POLR2J3-201ENST00000379340 ZBED9Q6R2W3 1325 aa14.26□□□□□ -0.13
POLR2J3-201ENST00000379340 BRD4O60885 1362 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-201ENST00000379340 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
POLR2J3-201ENST00000379340 CDCA8Q53HL2 280 aa14.25□□□□□ -0.13
POLR2J3-201ENST00000379340 MYBBP1AQ9BQG0 1328 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-201ENST00000379340 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
POLR2J3-201ENST00000379340 PPLO60437 1756 aa14.24□□□□□ -0.13
POLR2J3-201ENST00000379340 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
POLR2J3-201ENST00000379340 FAM9BQ8IZU0 186 aa14.24□□□□□ -0.13
POLR2J3-201ENST00000379340 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-201ENST00000379340 TNRQ92752 1358 aa14.23□□□□□ -0.13
POLR2J3-201ENST00000379340 PIK3C2BO00750 1634 aa14.23□□□□□ -0.13
POLR2J3-201ENST00000379340 SYNMO15061 1565 aa14.23□□□□□ -0.13
POLR2J3-201ENST00000379340 NOS1P29475 1434 aa14.23□□□□□ -0.13
POLR2J3-201ENST00000379340 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
POLR2J3-201ENST00000379340 RPGRIP1LQ68CZ1 1315 aa14.22□□□□□ -0.13
POLR2J3-201ENST00000379340 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
POLR2J3-201ENST00000379340 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-201ENST00000379340 PER1O15534 1290 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-201ENST00000379340 TMC1Q8TDI8 760 aa14.19□□□□□ -0.14
POLR2J3-201ENST00000379340 NPHP4O75161 1426 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-201ENST00000379340 FKBP8Q14318 412 aa14.18□□□□□ -0.14
POLR2J3-201ENST00000379340 ANKLE2Q86XL3 938 aa14.18□□□□□ -0.14
POLR2J3-201ENST00000379340 SBNO2Q9Y2G9 1366 aa14.18□□□□□ -0.14
POLR2J3-201ENST00000379340 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
POLR2J3-201ENST00000379340 NLRP13Q86W25 1043 aa14.17□□□□□ -0.14
POLR2J3-201ENST00000379340 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-201ENST00000379340 INSRP06213 1382 aa14.17□□□□□ -0.14
POLR2J3-201ENST00000379340 LRPPRCP42704 1394 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-201ENST00000379340 MED14O60244 1454 aa14.17□□□□□ -0.14
POLR2J3-201ENST00000379340 PIK3C2GO75747 1445 aa14.17□□□□□ -0.14
POLR2J3-201ENST00000379340 ADGRF5Q8IZF2 1346 aa14.16□□□□□ -0.14
POLR2J3-201ENST00000379340 MYOM1P52179 1685 aa14.16□□□□□ -0.14
POLR2J3-201ENST00000379340 CFAP65Q6ZU64 1925 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-201ENST00000379340 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
POLR2J3-201ENST00000379340 THEMISQ8N1K5 641 aaPredicted RBP14.14□□□□□ -0.15
POLR2J3-201ENST00000379340 PANK3Q9H999 370 aa14.14□□□□□ -0.15
POLR2J3-201ENST00000379340 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
POLR2J3-201ENST00000379340 NPC1L1Q9UHC9 1359 aa14.13□□□□□ -0.15
POLR2J3-201ENST00000379340 SLC52A1Q9NWF4 448 aa14.13□□□□□ -0.15
POLR2J3-201ENST00000379340 NEXMIFQ5QGS0 1516 aa14.13□□□□□ -0.15
POLR2J3-201ENST00000379340 SMG6Q86US8 1419 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-201ENST00000379340 POTEAQ6S8J7 498 aa14.12□□□□□ -0.15
POLR2J3-201ENST00000379340 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
POLR2J3-201ENST00000379340 ZFYVE9O95405 1425 aa14.12□□□□□ -0.15
POLR2J3-201ENST00000379340 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms