RNA–Protein interactions for RNA: ENST00000379145.5

PCYT1B-203, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 1 (best) BASIC

Gene PCYT1B, Length 5,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-203ENST00000379145 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
PCYT1B-203ENST00000379145 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
PCYT1B-203ENST00000379145 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
PCYT1B-203ENST00000379145 ANKRD30AQ9BXX3 1397 aa11.73□□□□□ -0.53
PCYT1B-203ENST00000379145 MPNDQ8N594 471 aa11.72□□□□□ -0.53
PCYT1B-203ENST00000379145 ZKSCAN2Q63HK3 967 aa11.72□□□□□ -0.53
PCYT1B-203ENST00000379145 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
PCYT1B-203ENST00000379145 LNPKQ9C0E8 428 aa11.71□□□□□ -0.54
PCYT1B-203ENST00000379145 SASS6Q6UVJ0 657 aa11.71□□□□□ -0.54
PCYT1B-203ENST00000379145 SMAP1Q8IYB5 467 aaPredicted RBP11.71□□□□□ -0.54
PCYT1B-203ENST00000379145 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.54
PCYT1B-203ENST00000379145 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
PCYT1B-203ENST00000379145 MORC1Q86VD1 984 aa11.7□□□□□ -0.54
PCYT1B-203ENST00000379145 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
PCYT1B-203ENST00000379145 PLEKHH2Q8IVE3 1493 aa11.7□□□□□ -0.54
PCYT1B-203ENST00000379145 DYNC1I1O14576 645 aa11.7□□□□□ -0.54
PCYT1B-203ENST00000379145 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
PCYT1B-203ENST00000379145 PRPF40AO75400 957 aaKnown RBP11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 FOXD4L6Q3SYB3 417 aaPredicted RBP11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 FOXD4L3Q6VB84 417 aaPredicted RBP11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 KIAA1107Q9UPP5 1409 aa11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 AAMPQ13685 434 aa11.69□□□□□ -0.54
PCYT1B-203ENST00000379145 SSFA2P28290 1259 aa11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 SPATA31E1Q6ZUB1 1445 aa11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 NUCB2P80303 420 aa11.68□□□□□ -0.54
PCYT1B-203ENST00000379145 MAPK8IP2Q13387 824 aaPredicted RBP11.67□□□□□ -0.54
PCYT1B-203ENST00000379145 SUPT6HQ7KZ85 1726 aaKnown RBP11.67□□□□□ -0.54
PCYT1B-203ENST00000379145 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
PCYT1B-203ENST00000379145 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
PCYT1B-203ENST00000379145 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
PCYT1B-203ENST00000379145 CFAP43Q8NDM7 1665 aa11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 TDRD9Q8NDG6 1382 aaKnown RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 NOL8Q76FK4 1167 aaKnown RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 APBB1O00213 710 aa11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 MEX3CQ5U5Q3 659 aaKnown RBP11.66□□□□□ -0.54
PCYT1B-203ENST00000379145 PLEKHH1Q9ULM0 1364 aa11.65□□□□□ -0.54
PCYT1B-203ENST00000379145 PLEKHD1A6NEE1 506 aa11.65□□□□□ -0.54
PCYT1B-203ENST00000379145 ST18O60284 1047 aa11.65□□□□□ -0.54
PCYT1B-203ENST00000379145 DDX19BQ9UMR2 479 aa11.65□□□□□ -0.54
PCYT1B-203ENST00000379145 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.54
PCYT1B-203ENST00000379145 CCDC94Q9BW85 323 aaPredicted RBP11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 CCDC144AA2RUR9 1427 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 FGD1P98174 961 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 USP19O94966 1318 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 DAPK1P53355 1430 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 PHF14O94880 888 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 SPDYE4A6NLX3 237 aa11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 CHMP4BQ9H444 224 aaKnown RBP11.64□□□□□ -0.55
PCYT1B-203ENST00000379145 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
PCYT1B-203ENST00000379145 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
PCYT1B-203ENST00000379145 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
PCYT1B-203ENST00000379145 SYCE3A1L190 88 aa11.63□□□□□ -0.55
PCYT1B-203ENST00000379145 KLHL40Q2TBA0 621 aa11.63□□□□□ -0.55
PCYT1B-203ENST00000379145 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
PCYT1B-203ENST00000379145 KIF3AQ9Y496 699 aa11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 RAD54L2Q9Y4B4 1467 aa11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 MVPQ14764 893 aaKnown RBP11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 BAG4O95429 457 aaKnown RBP11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 TERF1P54274 439 aa11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 ZKSCAN5Q9Y2L8 839 aa11.62□□□□□ -0.55
PCYT1B-203ENST00000379145 KDM5BQ9UGL1 1544 aa11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 ZSCAN23Q3MJ62 389 aa11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 TSPY26PQ9H489 355 aa11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 CCDC9Q9Y3X0 531 aaKnown RBP11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 DIAPH3Q9NSV4 1193 aa11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 RAB3GAP1Q15042 981 aa11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
PCYT1B-203ENST00000379145 IGSF3O75054 1194 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 RARSP54136 660 aaKnown RBP11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 ANKRD50Q9ULJ7 1429 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 ROCK1Q13464 1354 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 RIPK4P57078 832 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 RUNDC1Q96C34 613 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 NOL7Q9UMY1 257 aaKnown RBP11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
PCYT1B-203ENST00000379145 MCM5P33992 734 aa11.59□□□□□ -0.55
PCYT1B-203ENST00000379145 TNNQ9UQP3 1299 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms