RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
LINC00654-201ENST00000379053 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
LINC00654-201ENST00000379053 ST18O60284 1047 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
LINC00654-201ENST00000379053 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 FAM184AQ8NB25 1140 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 GZF1Q9H116 711 aaPredicted RBP13.48□□□□□ -0.25
LINC00654-201ENST00000379053 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
LINC00654-201ENST00000379053 ATAD2BQ9ULI0 1458 aa13.47□□□□□ -0.25
LINC00654-201ENST00000379053 CPLX2Q6PUV4 134 aaKnown RBP13.47□□□□□ -0.25
LINC00654-201ENST00000379053 TOP2AP11388 1531 aaKnown RBP13.47□□□□□ -0.25
LINC00654-201ENST00000379053 THEMISQ8N1K5 641 aaPredicted RBP13.47□□□□□ -0.25
LINC00654-201ENST00000379053 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
LINC00654-201ENST00000379053 MYBBP1AQ9BQG0 1328 aaKnown RBP13.46□□□□□ -0.25
LINC00654-201ENST00000379053 RBM19Q9Y4C8 960 aaKnown RBP13.46□□□□□ -0.25
LINC00654-201ENST00000379053 A0A0U1RQG5 324 aaPredicted RBP13.46□□□□□ -0.25
LINC00654-201ENST00000379053 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
LINC00654-201ENST00000379053 IFIT2P09913 472 aaKnown RBP13.46□□□□□ -0.26
LINC00654-201ENST00000379053 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.26
LINC00654-201ENST00000379053 NLRP6P59044 892 aa13.45□□□□□ -0.26
LINC00654-201ENST00000379053 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
LINC00654-201ENST00000379053 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
LINC00654-201ENST00000379053 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
LINC00654-201ENST00000379053 G3BP1Q13283 466 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00654-201ENST00000379053 ESCO1Q5FWF5 840 aa13.44□□□□□ -0.26
LINC00654-201ENST00000379053 FOXD4L5Q5VV16 416 aaPredicted RBP13.44□□□□□ -0.26
LINC00654-201ENST00000379053 FOXD4L4Q8WXT5 416 aaPredicted RBP13.44□□□□□ -0.26
LINC00654-201ENST00000379053 TPM3P06753 285 aa13.44□□□□□ -0.26
LINC00654-201ENST00000379053 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
LINC00654-201ENST00000379053 TXNDC2Q86VQ3 553 aa13.43□□□□□ -0.26
LINC00654-201ENST00000379053 RIPK4P57078 832 aa13.43□□□□□ -0.26
LINC00654-201ENST00000379053 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
LINC00654-201ENST00000379053 CCDC43Q96MW1 224 aaKnown RBP13.43□□□□□ -0.26
LINC00654-201ENST00000379053 STRN4Q9NRL3 753 aa13.43□□□□□ -0.26
LINC00654-201ENST00000379053 E9PSI1 815 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 TRDNQ13061 729 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 TRIM29Q14134 588 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 AIMP1Q12904 312 aaKnown RBP13.42□□□□□ -0.26
LINC00654-201ENST00000379053 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
LINC00654-201ENST00000379053 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
LINC00654-201ENST00000379053 CPLX1O14810 134 aa13.41□□□□□ -0.26
LINC00654-201ENST00000379053 FAM177BA6PVY3 158 aa13.4□□□□□ -0.26
LINC00654-201ENST00000379053 ZKSCAN1P17029 563 aaPredicted RBP13.4□□□□□ -0.26
LINC00654-201ENST00000379053 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
LINC00654-201ENST00000379053 API5Q9BZZ5 524 aaKnown RBP13.4□□□□□ -0.26
LINC00654-201ENST00000379053 TOM1O60784 492 aa13.4□□□□□ -0.26
LINC00654-201ENST00000379053 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
LINC00654-201ENST00000379053 ERICH2A1L162 156 aa13.4□□□□□ -0.27
LINC00654-201ENST00000379053 APAF1O14727 1248 aa13.4□□□□□ -0.27
LINC00654-201ENST00000379053 TPM2P07951 284 aa13.4□□□□□ -0.27
LINC00654-201ENST00000379053 HMOX1P09601 288 aa13.4□□□□□ -0.27
LINC00654-201ENST00000379053 TSR1Q2NL82 804 aaKnown RBP13.4□□□□□ -0.27
LINC00654-201ENST00000379053 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.27
LINC00654-201ENST00000379053 NFXL1Q6ZNB6 911 aa13.39□□□□□ -0.27
LINC00654-201ENST00000379053 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
LINC00654-201ENST00000379053 FYB1O15117 783 aa13.39□□□□□ -0.27
LINC00654-201ENST00000379053 NEUROD6Q96NK8 337 aa13.38□□□□□ -0.27
LINC00654-201ENST00000379053 USP47Q96K76 1375 aa13.38□□□□□ -0.27
LINC00654-201ENST00000379053 WIZO95785 1651 aa13.38□□□□□ -0.27
LINC00654-201ENST00000379053 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
LINC00654-201ENST00000379053 MIA2Q96PC5 1412 aa13.37□□□□□ -0.27
LINC00654-201ENST00000379053 PLIN1O60240 522 aa13.37□□□□□ -0.27
LINC00654-201ENST00000379053 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
LINC00654-201ENST00000379053 CCDC47Q96A33 483 aaKnown RBP13.37□□□□□ -0.27
LINC00654-201ENST00000379053 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
LINC00654-201ENST00000379053 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
LINC00654-201ENST00000379053 PHF14O94880 888 aa13.36□□□□□ -0.27
LINC00654-201ENST00000379053 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
LINC00654-201ENST00000379053 ATP6V1DQ9Y5K8 247 aa13.36□□□□□ -0.27
LINC00654-201ENST00000379053 C16orf71Q8IYS4 520 aaPredicted RBP13.36□□□□□ -0.27
LINC00654-201ENST00000379053 GNAI1P63096 354 aa13.35□□□□□ -0.27
LINC00654-201ENST00000379053 AFAP1Q8N556 730 aa13.35□□□□□ -0.27
LINC00654-201ENST00000379053 MYOM3Q5VTT5 1437 aa13.35□□□□□ -0.27
LINC00654-201ENST00000379053 FOXD4L6Q3SYB3 417 aaPredicted RBP13.35□□□□□ -0.27
LINC00654-201ENST00000379053 FOXD4L3Q6VB84 417 aaPredicted RBP13.35□□□□□ -0.27
LINC00654-201ENST00000379053 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
LINC00654-201ENST00000379053 HSP90AB4PQ58FF6 505 aa13.35□□□□□ -0.27
LINC00654-201ENST00000379053 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
LINC00654-201ENST00000379053 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
LINC00654-201ENST00000379053 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
LINC00654-201ENST00000379053 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
LINC00654-201ENST00000379053 ROCK1Q13464 1354 aa13.34□□□□□ -0.27
LINC00654-201ENST00000379053 TPM1P09493 284 aa13.34□□□□□ -0.27
LINC00654-201ENST00000379053 KIF6Q6ZMV9 814 aa13.34□□□□□ -0.27
LINC00654-201ENST00000379053 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.27
LINC00654-201ENST00000379053 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.27
LINC00654-201ENST00000379053 PCMTD1Q96MG8 357 aaPredicted RBP13.33□□□□□ -0.28
LINC00654-201ENST00000379053 RAD54L2Q9Y4B4 1467 aa13.33□□□□□ -0.28
LINC00654-201ENST00000379053 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
LINC00654-201ENST00000379053 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
LINC00654-201ENST00000379053 REC8O95072 547 aa13.33□□□□□ -0.28
LINC00654-201ENST00000379053 PLEKHO1Q53GL0 409 aaPredicted RBP13.33□□□□□ -0.28
LINC00654-201ENST00000379053 BECN2A8MW95 431 aa13.32□□□□□ -0.28
LINC00654-201ENST00000379053 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms