RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 INO80Q9ULG1 1556 aaPredicted RBP16.67■□□□□ 0.26
CHGB-201ENST00000378961 RGS3P49796 1198 aa16.67■□□□□ 0.26
CHGB-201ENST00000378961 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
CHGB-201ENST00000378961 POGKQ9P215 609 aa16.65■□□□□ 0.26
CHGB-201ENST00000378961 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
CHGB-201ENST00000378961 RRAGDQ9NQL2 400 aaPredicted RBP16.64■□□□□ 0.25
CHGB-201ENST00000378961 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
CHGB-201ENST00000378961 E9PCH4 1651 aa16.63■□□□□ 0.25
CHGB-201ENST00000378961 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
CHGB-201ENST00000378961 TRPM1Q7Z4N2 1603 aa16.62■□□□□ 0.25
CHGB-201ENST00000378961 DEPDC5O75140 1603 aa16.62■□□□□ 0.25
CHGB-201ENST00000378961 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
CHGB-201ENST00000378961 C8orf34Q49A92 452 aa16.61■□□□□ 0.25
CHGB-201ENST00000378961 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
CHGB-201ENST00000378961 PKNOX2Q96KN3 472 aa16.6■□□□□ 0.25
CHGB-201ENST00000378961 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
CHGB-201ENST00000378961 FAM43AQ8N2R8 423 aa16.59■□□□□ 0.25
CHGB-201ENST00000378961 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
CHGB-201ENST00000378961 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
CHGB-201ENST00000378961 TRPM2O94759 1503 aa16.59■□□□□ 0.25
CHGB-201ENST00000378961 TET3O43151 1660 aa16.59■□□□□ 0.25
CHGB-201ENST00000378961 PTPRTO14522 1441 aa16.59■□□□□ 0.25
CHGB-201ENST00000378961 EIF2AK4Q9P2K8 1649 aaKnown RBP16.59■□□□□ 0.25
CHGB-201ENST00000378961 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.25
CHGB-201ENST00000378961 GPRASP1Q5JY77 1395 aa16.58■□□□□ 0.24
CHGB-201ENST00000378961 SLKQ9H2G2 1235 aaPredicted RBP16.57■□□□□ 0.24
CHGB-201ENST00000378961 GGT6Q6P531 493 aa16.57■□□□□ 0.24
CHGB-201ENST00000378961 SPHKAPQ2M3C7 1700 aa16.56■□□□□ 0.24
CHGB-201ENST00000378961 RAPGEF3O95398 923 aa16.56■□□□□ 0.24
CHGB-201ENST00000378961 VWDEQ8N2E2 1590 aa16.56■□□□□ 0.24
CHGB-201ENST00000378961 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
CHGB-201ENST00000378961 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
CHGB-201ENST00000378961 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
CHGB-201ENST00000378961 STAC3Q96MF2 364 aa16.55■□□□□ 0.24
CHGB-201ENST00000378961 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
CHGB-201ENST00000378961 CLTCL1P53675 1640 aa16.53■□□□□ 0.24
CHGB-201ENST00000378961 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
CHGB-201ENST00000378961 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
CHGB-201ENST00000378961 MROH1Q8NDA8 1641 aa16.53■□□□□ 0.24
CHGB-201ENST00000378961 NEO1Q92859 1461 aa16.53■□□□□ 0.24
CHGB-201ENST00000378961 TMF1P82094 1093 aa16.52■□□□□ 0.23
CHGB-201ENST00000378961 CEP152O94986 1710 aa16.52■□□□□ 0.23
CHGB-201ENST00000378961 LAMC1P11047 1609 aa16.51■□□□□ 0.23
CHGB-201ENST00000378961 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
CHGB-201ENST00000378961 SEC24BO95487 1268 aa16.51■□□□□ 0.23
CHGB-201ENST00000378961 RALBP1Q15311 655 aa16.51■□□□□ 0.23
CHGB-201ENST00000378961 NLRP13Q86W25 1043 aa16.5■□□□□ 0.23
CHGB-201ENST00000378961 TESK2Q96S53 571 aa16.5■□□□□ 0.23
CHGB-201ENST00000378961 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
CHGB-201ENST00000378961 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
CHGB-201ENST00000378961 NAP1L5Q96NT1 182 aaPredicted RBP16.49■□□□□ 0.23
CHGB-201ENST00000378961 KTN1Q86UP2 1357 aaKnown RBP16.49■□□□□ 0.23
CHGB-201ENST00000378961 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
CHGB-201ENST00000378961 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
CHGB-201ENST00000378961 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
CHGB-201ENST00000378961 DISP3Q9P2K9 1392 aa16.48■□□□□ 0.23
CHGB-201ENST00000378961 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
CHGB-201ENST00000378961 MADDQ8WXG6 1647 aa16.47■□□□□ 0.23
CHGB-201ENST00000378961 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
CHGB-201ENST00000378961 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
CHGB-201ENST00000378961 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
CHGB-201ENST00000378961 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
CHGB-201ENST00000378961 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
CHGB-201ENST00000378961 ZMYND15Q9H091 742 aa16.46■□□□□ 0.23
CHGB-201ENST00000378961 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
CHGB-201ENST00000378961 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.23
CHGB-201ENST00000378961 FRMPD1Q5SYB0 1578 aa16.45■□□□□ 0.22
CHGB-201ENST00000378961 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
CHGB-201ENST00000378961 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
CHGB-201ENST00000378961 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
CHGB-201ENST00000378961 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
CHGB-201ENST00000378961 ADAMTS8Q9UP79 889 aa16.44■□□□□ 0.22
CHGB-201ENST00000378961 PANK3Q9H999 370 aa16.43■□□□□ 0.22
CHGB-201ENST00000378961 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
CHGB-201ENST00000378961 USP19O94966 1318 aa16.43■□□□□ 0.22
CHGB-201ENST00000378961 KIF1BO60333 1816 aa16.42■□□□□ 0.22
CHGB-201ENST00000378961 ADGRF5Q8IZF2 1346 aa16.42■□□□□ 0.22
CHGB-201ENST00000378961 NPATQ14207 1427 aa16.42■□□□□ 0.22
CHGB-201ENST00000378961 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
CHGB-201ENST00000378961 MAP3K4Q9Y6R4 1608 aa16.42■□□□□ 0.22
CHGB-201ENST00000378961 IGHDP01880 384 aa16.41■□□□□ 0.22
CHGB-201ENST00000378961 NEURL4Q96JN8 1562 aa16.41■□□□□ 0.22
CHGB-201ENST00000378961 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
CHGB-201ENST00000378961 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
CHGB-201ENST00000378961 CDCA8Q53HL2 280 aa16.4■□□□□ 0.22
CHGB-201ENST00000378961 EIF3AQ14152 1382 aaKnown RBP16.4■□□□□ 0.22
CHGB-201ENST00000378961 CFAP65Q6ZU64 1925 aaKnown RBP16.4■□□□□ 0.22
CHGB-201ENST00000378961 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
CHGB-201ENST00000378961 GLI2P10070 1586 aa16.39■□□□□ 0.21
CHGB-201ENST00000378961 BCAR3O75815 825 aa16.39■□□□□ 0.21
CHGB-201ENST00000378961 XRCC6P12956 609 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHGB-201ENST00000378961 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
CHGB-201ENST00000378961 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
CHGB-201ENST00000378961 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
CHGB-201ENST00000378961 ABCC3O15438 1527 aa16.38■□□□□ 0.21
CHGB-201ENST00000378961 MYOM2P54296 1465 aa16.38■□□□□ 0.21
CHGB-201ENST00000378961 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
CHGB-201ENST00000378961 YEATS2Q9ULM3 1422 aa16.37■□□□□ 0.21
CHGB-201ENST00000378961 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
CHGB-201ENST00000378961 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms