RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
PTPRR-203ENST00000378778 BRPF3Q9ULD4 1205 aa10.63□□□□□ -0.71
PTPRR-203ENST00000378778 TRMT2AQ8IZ69 625 aaKnown RBP10.62□□□□□ -0.71
PTPRR-203ENST00000378778 GOLGA2Q08379 1002 aa10.62□□□□□ -0.71
PTPRR-203ENST00000378778 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
PTPRR-203ENST00000378778 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
PTPRR-203ENST00000378778 IQGAP1P46940 1657 aa10.61□□□□□ -0.71
PTPRR-203ENST00000378778 PREX2Q70Z35 1606 aa10.61□□□□□ -0.71
PTPRR-203ENST00000378778 A2MP01023 1474 aa10.61□□□□□ -0.71
PTPRR-203ENST00000378778 TESK2Q96S53 571 aa10.61□□□□□ -0.71
PTPRR-203ENST00000378778 NKTRP30414 1462 aaKnown RBP10.61□□□□□ -0.71
PTPRR-203ENST00000378778 CGNL1Q0VF96 1302 aa10.61□□□□□ -0.71
PTPRR-203ENST00000378778 PDE3AQ14432 1141 aa10.6□□□□□ -0.71
PTPRR-203ENST00000378778 MAGI2Q86UL8 1455 aa10.6□□□□□ -0.71
PTPRR-203ENST00000378778 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
PTPRR-203ENST00000378778 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
PTPRR-203ENST00000378778 NEURL4Q96JN8 1562 aa10.59□□□□□ -0.71
PTPRR-203ENST00000378778 WDR43Q15061 677 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTPRR-203ENST00000378778 SCAPERQ9BY12 1400 aa10.59□□□□□ -0.71
PTPRR-203ENST00000378778 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
PTPRR-203ENST00000378778 SLFN5Q08AF3 891 aa10.58□□□□□ -0.72
PTPRR-203ENST00000378778 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
PTPRR-203ENST00000378778 GLIPR1L2Q4G1C9 344 aa10.58□□□□□ -0.72
PTPRR-203ENST00000378778 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
PTPRR-203ENST00000378778 DISP3Q9P2K9 1392 aa10.58□□□□□ -0.72
PTPRR-203ENST00000378778 PLIN1O60240 522 aa10.57□□□□□ -0.72
PTPRR-203ENST00000378778 PANK3Q9H999 370 aa10.57□□□□□ -0.72
PTPRR-203ENST00000378778 DUOX2Q9NRD8 1548 aa10.57□□□□□ -0.72
PTPRR-203ENST00000378778 PLB1Q6P1J6 1458 aa10.57□□□□□ -0.72
PTPRR-203ENST00000378778 E9PSI1 815 aa10.56□□□□□ -0.72
PTPRR-203ENST00000378778 FOXD4L1Q9NU39 408 aa10.56□□□□□ -0.72
PTPRR-203ENST00000378778 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
PTPRR-203ENST00000378778 KDM2AQ9Y2K7 1162 aa10.56□□□□□ -0.72
PTPRR-203ENST00000378778 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
PTPRR-203ENST00000378778 PLEKHH1Q9ULM0 1364 aa10.56□□□□□ -0.72
PTPRR-203ENST00000378778 PLA2R1Q13018 1463 aa10.56□□□□□ -0.72
PTPRR-203ENST00000378778 CDC42BPBQ9Y5S2 1711 aa10.55□□□□□ -0.72
PTPRR-203ENST00000378778 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
PTPRR-203ENST00000378778 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
PTPRR-203ENST00000378778 ADAMTS8Q9UP79 889 aa10.55□□□□□ -0.72
PTPRR-203ENST00000378778 SPHKAPQ2M3C7 1700 aa10.55□□□□□ -0.72
PTPRR-203ENST00000378778 MADDQ8WXG6 1647 aa10.55□□□□□ -0.72
PTPRR-203ENST00000378778 UPF2Q9HAU5 1272 aaKnown RBP10.54□□□□□ -0.72
PTPRR-203ENST00000378778 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
PTPRR-203ENST00000378778 ATP10BO94823 1461 aa10.54□□□□□ -0.72
PTPRR-203ENST00000378778 ZNF777Q9ULD5 760 aaPredicted RBP10.54□□□□□ -0.72
PTPRR-203ENST00000378778 KDM5AP29375 1690 aaKnown RBP10.54□□□□□ -0.72
PTPRR-203ENST00000378778 C20orf194Q5TEA3 1177 aa10.54□□□□□ -0.72
PTPRR-203ENST00000378778 PMFBP1Q8TBY8 1022 aa10.54□□□□□ -0.72
PTPRR-203ENST00000378778 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
PTPRR-203ENST00000378778 TTC37Q6PGP7 1564 aa10.53□□□□□ -0.72
PTPRR-203ENST00000378778 MYOM1P52179 1685 aa10.53□□□□□ -0.72
PTPRR-203ENST00000378778 SCAF11Q99590 1463 aaKnown RBP10.53□□□□□ -0.72
PTPRR-203ENST00000378778 NLRP1Q9C000 1473 aa10.53□□□□□ -0.72
PTPRR-203ENST00000378778 USP19O94966 1318 aa10.53□□□□□ -0.72
PTPRR-203ENST00000378778 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
PTPRR-203ENST00000378778 CEP152O94986 1710 aa10.52□□□□□ -0.73
PTPRR-203ENST00000378778 ARID3CA6NKF2 412 aa10.51□□□□□ -0.73
PTPRR-203ENST00000378778 PTMSP20962 102 aa10.51□□□□□ -0.73
PTPRR-203ENST00000378778 ANTXR1Q9H6X2 564 aa10.5□□□□□ -0.73
PTPRR-203ENST00000378778 FSD2A1L4K1 749 aa10.5□□□□□ -0.73
PTPRR-203ENST00000378778 CLCN1P35523 988 aa10.5□□□□□ -0.73
PTPRR-203ENST00000378778 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
PTPRR-203ENST00000378778 NBPF1Q3BBV0 1214 aa10.5□□□□□ -0.73
PTPRR-203ENST00000378778 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
PTPRR-203ENST00000378778 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
PTPRR-203ENST00000378778 TRPM2O94759 1503 aa10.49□□□□□ -0.73
PTPRR-203ENST00000378778 KANK1Q14678 1352 aa10.49□□□□□ -0.73
PTPRR-203ENST00000378778 TBC1D32Q96NH3 1257 aa10.48□□□□□ -0.73
PTPRR-203ENST00000378778 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
PTPRR-203ENST00000378778 GOLGA6L3A6NEY3 463 aa10.48□□□□□ -0.73
PTPRR-203ENST00000378778 RGS3P49796 1198 aa10.48□□□□□ -0.73
PTPRR-203ENST00000378778 RRP9O43818 475 aaKnown RBP10.47□□□□□ -0.73
PTPRR-203ENST00000378778 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
PTPRR-203ENST00000378778 MYO3AQ8NEV4 1616 aa10.47□□□□□ -0.73
PTPRR-203ENST00000378778 MRE11P49959 708 aa10.47□□□□□ -0.73
PTPRR-203ENST00000378778 CENPJQ9HC77 1338 aaPredicted RBP10.46□□□□□ -0.73
PTPRR-203ENST00000378778 ARXQ96QS3 562 aa10.46□□□□□ -0.73
PTPRR-203ENST00000378778 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.74
PTPRR-203ENST00000378778 USP32Q8NFA0 1604 aa10.46□□□□□ -0.74
PTPRR-203ENST00000378778 SBNO2Q9Y2G9 1366 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 SYCP2Q9BX26 1530 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
PTPRR-203ENST00000378778 CHMP5Q9NZZ3 219 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 JPH4Q96JJ6 628 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 POGKQ9P215 609 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 PTPRTO14522 1441 aa10.45□□□□□ -0.74
PTPRR-203ENST00000378778 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
PTPRR-203ENST00000378778 RWDD1Q9H446 243 aaPredicted RBP10.44□□□□□ -0.74
PTPRR-203ENST00000378778 MCM4P33991 863 aa10.44□□□□□ -0.74
PTPRR-203ENST00000378778 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
PTPRR-203ENST00000378778 ADGRL1O94910 1474 aa10.44□□□□□ -0.74
PTPRR-203ENST00000378778 MYOM2P54296 1465 aa10.43□□□□□ -0.74
PTPRR-203ENST00000378778 HNRNPMP52272 730 aaKnown RBP eCLIP10.43□□□□□ -0.74
PTPRR-203ENST00000378778 FBLN2P98095 1184 aa10.43□□□□□ -0.74
PTPRR-203ENST00000378778 CCDC27Q2M243 656 aa10.43□□□□□ -0.74
PTPRR-203ENST00000378778 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
PTPRR-203ENST00000378778 DEPDC5O75140 1603 aa10.43□□□□□ -0.74
PTPRR-203ENST00000378778 IGHDP01880 384 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms