RNA–Protein interactions for RNA: ENST00000378126.4

PCDHA6-201, Transcript of protocadherin alpha 6, humanhuman

BASIC

Gene PCDHA6, Length 3,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-201ENST00000378126 NBR1Q14596 966 aa18.31■□□□□ 0.52
PCDHA6-201ENST00000378126 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
PCDHA6-201ENST00000378126 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
PCDHA6-201ENST00000378126 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
PCDHA6-201ENST00000378126 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
PCDHA6-201ENST00000378126 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
PCDHA6-201ENST00000378126 APAF1O14727 1248 aa18.29■□□□□ 0.52
PCDHA6-201ENST00000378126 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
PCDHA6-201ENST00000378126 STK26Q9P289 416 aa18.28■□□□□ 0.52
PCDHA6-201ENST00000378126 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
PCDHA6-201ENST00000378126 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
PCDHA6-201ENST00000378126 SLC12A5Q9H2X9 1139 aa18.27■□□□□ 0.52
PCDHA6-201ENST00000378126 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
PCDHA6-201ENST00000378126 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
PCDHA6-201ENST00000378126 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.51
PCDHA6-201ENST00000378126 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.51
PCDHA6-201ENST00000378126 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
PCDHA6-201ENST00000378126 NOS1P29475 1434 aa18.25■□□□□ 0.51
PCDHA6-201ENST00000378126 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
PCDHA6-201ENST00000378126 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
PCDHA6-201ENST00000378126 TRPM2O94759 1503 aa18.24■□□□□ 0.51
PCDHA6-201ENST00000378126 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
PCDHA6-201ENST00000378126 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
PCDHA6-201ENST00000378126 PTPRTO14522 1441 aa18.23■□□□□ 0.51
PCDHA6-201ENST00000378126 CD109Q6YHK3 1445 aa18.22■□□□□ 0.51
PCDHA6-201ENST00000378126 ANP32AP39687 249 aaKnown RBP18.22■□□□□ 0.51
PCDHA6-201ENST00000378126 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
PCDHA6-201ENST00000378126 SPHKAPQ2M3C7 1700 aa18.21■□□□□ 0.51
PCDHA6-201ENST00000378126 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
PCDHA6-201ENST00000378126 GOLGA2Q08379 1002 aa18.2■□□□□ 0.5
PCDHA6-201ENST00000378126 CENPJQ9HC77 1338 aaPredicted RBP18.2■□□□□ 0.5
PCDHA6-201ENST00000378126 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
PCDHA6-201ENST00000378126 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
PCDHA6-201ENST00000378126 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
PCDHA6-201ENST00000378126 BCAR3O75815 825 aa18.18■□□□□ 0.5
PCDHA6-201ENST00000378126 CABP2Q9NPB3 220 aa18.17■□□□□ 0.5
PCDHA6-201ENST00000378126 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
PCDHA6-201ENST00000378126 MLECQ14165 292 aa18.15■□□□□ 0.5
PCDHA6-201ENST00000378126 RNF17Q9BXT8 1623 aaKnown RBP18.15■□□□□ 0.5
PCDHA6-201ENST00000378126 TET3O43151 1660 aa18.15■□□□□ 0.5
PCDHA6-201ENST00000378126 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
PCDHA6-201ENST00000378126 ABCA9Q8IUA7 1624 aa18.15■□□□□ 0.5
PCDHA6-201ENST00000378126 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
PCDHA6-201ENST00000378126 RGS3P49796 1198 aa18.14■□□□□ 0.49
PCDHA6-201ENST00000378126 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
PCDHA6-201ENST00000378126 PDE4AP27815 886 aa18.14■□□□□ 0.49
PCDHA6-201ENST00000378126 NPATQ14207 1427 aa18.14■□□□□ 0.49
PCDHA6-201ENST00000378126 LAMC1P11047 1609 aa18.14■□□□□ 0.49
PCDHA6-201ENST00000378126 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
PCDHA6-201ENST00000378126 ZNF518AQ6AHZ1 1483 aa18.13■□□□□ 0.49
PCDHA6-201ENST00000378126 CEP152O94986 1710 aa18.13■□□□□ 0.49
PCDHA6-201ENST00000378126 FRAT1Q92837 279 aaPredicted RBP18.13■□□□□ 0.49
PCDHA6-201ENST00000378126 NSD3Q9BZ95 1437 aa18.12■□□□□ 0.49
PCDHA6-201ENST00000378126 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
PCDHA6-201ENST00000378126 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
PCDHA6-201ENST00000378126 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
PCDHA6-201ENST00000378126 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
PCDHA6-201ENST00000378126 MROH1Q8NDA8 1641 aa18.11■□□□□ 0.49
PCDHA6-201ENST00000378126 SRPK2P78362 688 aaKnown RBP18.11■□□□□ 0.49
PCDHA6-201ENST00000378126 IDI1Q13907 227 aa18.11■□□□□ 0.49
PCDHA6-201ENST00000378126 FBXO31Q5XUX0 539 aaPredicted RBP18.11■□□□□ 0.49
PCDHA6-201ENST00000378126 ABCA6Q8N139 1617 aa18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 MINK1Q8N4C8 1332 aaPredicted RBP18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 MTHFSP49914 203 aa18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 STAG3Q9UJ98 1225 aa18.1■□□□□ 0.49
PCDHA6-201ENST00000378126 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
PCDHA6-201ENST00000378126 IPO9Q96P70 1041 aaKnown RBP18.09■□□□□ 0.49
PCDHA6-201ENST00000378126 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
PCDHA6-201ENST00000378126 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.49
PCDHA6-201ENST00000378126 DEPDC5O75140 1603 aa18.08■□□□□ 0.49
PCDHA6-201ENST00000378126 MROH2AA6NES4 1674 aa18.08■□□□□ 0.49
PCDHA6-201ENST00000378126 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.48
PCDHA6-201ENST00000378126 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
PCDHA6-201ENST00000378126 POGZQ7Z3K3 1410 aa18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 TCERG1O14776 1098 aaKnown RBP18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 GGNBP2Q9H3C7 697 aa18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 U2SURPO15042 1029 aaKnown RBP18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 PANK1Q8TE04 598 aa18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 SYNMO15061 1565 aa18.06■□□□□ 0.48
PCDHA6-201ENST00000378126 VWDEQ8N2E2 1590 aa18.05■□□□□ 0.48
PCDHA6-201ENST00000378126 U2AF1L5P0DN76 240 aaPredicted RBP18.05■□□□□ 0.48
PCDHA6-201ENST00000378126 U2AF1Q01081 240 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCDHA6-201ENST00000378126 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 FBLN1P23142 703 aa18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 KIF1BO60333 1816 aa18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 ZNF521Q96K83 1311 aa18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 POGKQ9P215 609 aa18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 KDM5AP29375 1690 aaKnown RBP18.04■□□□□ 0.48
PCDHA6-201ENST00000378126 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
PCDHA6-201ENST00000378126 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
PCDHA6-201ENST00000378126 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
PCDHA6-201ENST00000378126 MYOM1P52179 1685 aa18.03■□□□□ 0.48
PCDHA6-201ENST00000378126 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms