RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 MROH2AA6NES4 1674 aa25.92■■□□□ 1.74
PCDHA4-201ENST00000378125 SMG6Q86US8 1419 aaKnown RBP25.92■■□□□ 1.74
PCDHA4-201ENST00000378125 ABCA6Q8N139 1617 aa25.91■■□□□ 1.74
PCDHA4-201ENST00000378125 NPATQ14207 1427 aa25.9■■□□□ 1.74
PCDHA4-201ENST00000378125 MAP3K4Q9Y6R4 1608 aa25.89■■□□□ 1.73
PCDHA4-201ENST00000378125 LMTK2Q8IWU2 1503 aa25.88■■□□□ 1.73
PCDHA4-201ENST00000378125 KNSTRNQ9Y448 316 aa25.87■■□□□ 1.73
PCDHA4-201ENST00000378125 NOS1P29475 1434 aa25.87■■□□□ 1.73
PCDHA4-201ENST00000378125 EIF3AQ14152 1382 aaKnown RBP25.86■■□□□ 1.73
PCDHA4-201ENST00000378125 NUTM2DQ5VT03 806 aaPredicted RBP25.85■■□□□ 1.73
PCDHA4-201ENST00000378125 PPP4R2Q9NY27 417 aa25.85■■□□□ 1.73
PCDHA4-201ENST00000378125 B4GALNT3Q6L9W6 998 aa25.85■■□□□ 1.73
PCDHA4-201ENST00000378125 MYOM2P54296 1465 aa25.84■■□□□ 1.73
PCDHA4-201ENST00000378125 NEO1Q92859 1461 aa25.83■■□□□ 1.73
PCDHA4-201ENST00000378125 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
PCDHA4-201ENST00000378125 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
PCDHA4-201ENST00000378125 NEURL4Q96JN8 1562 aa25.81■■□□□ 1.72
PCDHA4-201ENST00000378125 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 KIAA1210Q9ULL0 1709 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 ABCC3O15438 1527 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 ERICH6BQ5W0A0 696 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 ADGRB3O60242 1522 aa25.79■■□□□ 1.72
PCDHA4-201ENST00000378125 TMEM132EQ6IEE7 984 aa25.79■■□□□ 1.72
PCDHA4-201ENST00000378125 TRAK1Q9UPV9 953 aa25.79■■□□□ 1.72
PCDHA4-201ENST00000378125 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
PCDHA4-201ENST00000378125 YEATS2Q9ULM3 1422 aa25.78■■□□□ 1.72
PCDHA4-201ENST00000378125 DIP2CQ9Y2E4 1556 aa25.77■■□□□ 1.72
PCDHA4-201ENST00000378125 SYNMO15061 1565 aa25.75■■□□□ 1.71
PCDHA4-201ENST00000378125 PPP2R1AP30153 589 aa25.75■■□□□ 1.71
PCDHA4-201ENST00000378125 FAM69CQ0P6D2 419 aa25.74■■□□□ 1.71
PCDHA4-201ENST00000378125 MYOM1P52179 1685 aa25.74■■□□□ 1.71
PCDHA4-201ENST00000378125 ERVK-7P63135 1459 aa25.74■■□□□ 1.71
PCDHA4-201ENST00000378125 CAMSAP1Q5T5Y3 1602 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 CDCA7LQ96GN5 454 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 NRXN1Q9ULB1 1477 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 SIGLEC1Q9BZZ2 1709 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 RICTORQ6R327 1708 aa25.72■■□□□ 1.71
PCDHA4-201ENST00000378125 KDM5AP29375 1690 aaKnown RBP25.72■■□□□ 1.71
PCDHA4-201ENST00000378125 RBM19Q9Y4C8 960 aaKnown RBP25.72■■□□□ 1.71
PCDHA4-201ENST00000378125 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
PCDHA4-201ENST00000378125 CENPJQ9HC77 1338 aaPredicted RBP25.69■■□□□ 1.7
PCDHA4-201ENST00000378125 C14orf93Q9H972 538 aaKnown RBP25.69■■□□□ 1.7
PCDHA4-201ENST00000378125 PPLO60437 1756 aa25.69■■□□□ 1.7
PCDHA4-201ENST00000378125 ASXL1Q8IXJ9 1541 aa25.68■■□□□ 1.7
PCDHA4-201ENST00000378125 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
PCDHA4-201ENST00000378125 PIK3C2GO75747 1445 aa25.68■■□□□ 1.7
PCDHA4-201ENST00000378125 CARD14Q9BXL6 1004 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 IDI1Q13907 227 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 BLMP54132 1417 aaPredicted RBP25.65■■□□□ 1.7
PCDHA4-201ENST00000378125 WDR43Q15061 677 aaKnown RBP eCLIP25.64■■□□□ 1.7
PCDHA4-201ENST00000378125 TSPOAP1O95153 1857 aa25.63■■□□□ 1.69
PCDHA4-201ENST00000378125 RPGRIP1LQ68CZ1 1315 aa25.62■■□□□ 1.69
PCDHA4-201ENST00000378125 RCAN3Q9UKA8 241 aa25.62■■□□□ 1.69
PCDHA4-201ENST00000378125 SLC24A1O60721 1099 aa25.6■■□□□ 1.69
PCDHA4-201ENST00000378125 SETBP1Q9Y6X0 1596 aa25.6■■□□□ 1.69
PCDHA4-201ENST00000378125 PDE3BQ13370 1112 aa25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 SAFB2Q14151 953 aaKnown RBP eCLIP25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 ADGRB1O14514 1584 aa25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 VGFO15240 615 aaPredicted RBP25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 FBXO31Q5XUX0 539 aaPredicted RBP25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 SLC12A5Q9H2X9 1139 aa25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 CCDC136Q96JN2 1154 aa25.58■■□□□ 1.69
PCDHA4-201ENST00000378125 RRP1P56182 461 aaKnown RBP25.58■■□□□ 1.68
PCDHA4-201ENST00000378125 MYO3AQ8NEV4 1616 aa25.58■■□□□ 1.68
PCDHA4-201ENST00000378125 GLI2P10070 1586 aa25.57■■□□□ 1.68
PCDHA4-201ENST00000378125 PIK3C2BO00750 1634 aa25.57■■□□□ 1.68
PCDHA4-201ENST00000378125 CCDC146Q8IYE0 955 aa25.57■■□□□ 1.68
PCDHA4-201ENST00000378125 QRICH2Q9H0J4 1663 aa25.56■■□□□ 1.68
PCDHA4-201ENST00000378125 STK26Q9P289 416 aa25.55■■□□□ 1.68
PCDHA4-201ENST00000378125 NEXMIFQ5QGS0 1516 aa25.55■■□□□ 1.68
PCDHA4-201ENST00000378125 TNNT2P45379 298 aaPredicted RBP25.54■■□□□ 1.68
PCDHA4-201ENST00000378125 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
PCDHA4-201ENST00000378125 DIP2BQ9P265 1576 aa25.54■■□□□ 1.68
PCDHA4-201ENST00000378125 ARHGAP31Q2M1Z3 1444 aa25.53■■□□□ 1.68
PCDHA4-201ENST00000378125 NPC1L1Q9UHC9 1359 aa25.53■■□□□ 1.68
PCDHA4-201ENST00000378125 MLECQ14165 292 aa25.52■■□□□ 1.68
PCDHA4-201ENST00000378125 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
PCDHA4-201ENST00000378125 INSRP06213 1382 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 PLIN1O60240 522 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 EXOC6Q8TAG9 804 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 ZMYM4Q5VZL5 1548 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 ZC3H13Q5T200 1668 aaKnown RBP25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 PLEKHH1Q9ULM0 1364 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 NSD3Q9BZ95 1437 aa25.5■■□□□ 1.67
PCDHA4-201ENST00000378125 MYO5BQ9ULV0 1848 aa25.5■■□□□ 1.67
PCDHA4-201ENST00000378125 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
PCDHA4-201ENST00000378125 PREX1Q8TCU6 1659 aa25.47■■□□□ 1.67
PCDHA4-201ENST00000378125 MORC1Q86VD1 984 aa25.46■■□□□ 1.67
PCDHA4-201ENST00000378125 STAG3Q9UJ98 1225 aa25.46■■□□□ 1.67
PCDHA4-201ENST00000378125 APAF1O14727 1248 aa25.43■■□□□ 1.66
PCDHA4-201ENST00000378125 EVC2Q86UK5 1308 aa25.43■■□□□ 1.66
PCDHA4-201ENST00000378125 ARHGEF28Q8N1W1 1705 aaKnown RBP25.42■■□□□ 1.66
PCDHA4-201ENST00000378125 TMEM131LA2VDJ0 1609 aa25.41■■□□□ 1.66
PCDHA4-201ENST00000378125 TULP4Q9NRJ4 1543 aa25.4■■□□□ 1.66
PCDHA4-201ENST00000378125 GOLGA2Q08379 1002 aa25.38■■□□□ 1.65
PCDHA4-201ENST00000378125 SRPK2P78362 688 aaKnown RBP25.38■■□□□ 1.65
PCDHA4-201ENST00000378125 DUSP27Q5VZP5 1158 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms