RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 MROH2AA6NES4 1674 aa25.92■■□□□ 1.74
PCDHA4-201ENST00000378125 SMG6Q86US8 1419 aaKnown RBP25.92■■□□□ 1.74
PCDHA4-201ENST00000378125 ABCA6Q8N139 1617 aa25.91■■□□□ 1.74
PCDHA4-201ENST00000378125 NPATQ14207 1427 aa25.9■■□□□ 1.74
PCDHA4-201ENST00000378125 MAP3K4Q9Y6R4 1608 aa25.89■■□□□ 1.73
PCDHA4-201ENST00000378125 LMTK2Q8IWU2 1503 aa25.88■■□□□ 1.73
PCDHA4-201ENST00000378125 KNSTRNQ9Y448 316 aa25.87■■□□□ 1.73
PCDHA4-201ENST00000378125 NOS1P29475 1434 aa25.87■■□□□ 1.73
PCDHA4-201ENST00000378125 EIF3AQ14152 1382 aaKnown RBP25.86■■□□□ 1.73
PCDHA4-201ENST00000378125 NUTM2DQ5VT03 806 aaPredicted RBP25.85■■□□□ 1.73
PCDHA4-201ENST00000378125 PPP4R2Q9NY27 417 aa25.85■■□□□ 1.73
PCDHA4-201ENST00000378125 B4GALNT3Q6L9W6 998 aa25.85■■□□□ 1.73
PCDHA4-201ENST00000378125 MYOM2P54296 1465 aa25.84■■□□□ 1.73
PCDHA4-201ENST00000378125 NEO1Q92859 1461 aa25.83■■□□□ 1.73
PCDHA4-201ENST00000378125 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
PCDHA4-201ENST00000378125 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
PCDHA4-201ENST00000378125 NEURL4Q96JN8 1562 aa25.81■■□□□ 1.72
PCDHA4-201ENST00000378125 IFT172Q9UG01 1749 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 KIAA1210Q9ULL0 1709 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 ABCC3O15438 1527 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 ERICH6BQ5W0A0 696 aa25.8■■□□□ 1.72
PCDHA4-201ENST00000378125 ADGRB3O60242 1522 aa25.79■■□□□ 1.72
PCDHA4-201ENST00000378125 TMEM132EQ6IEE7 984 aa25.79■■□□□ 1.72
PCDHA4-201ENST00000378125 TRAK1Q9UPV9 953 aa25.79■■□□□ 1.72
PCDHA4-201ENST00000378125 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
PCDHA4-201ENST00000378125 YEATS2Q9ULM3 1422 aa25.78■■□□□ 1.72
PCDHA4-201ENST00000378125 DIP2CQ9Y2E4 1556 aa25.77■■□□□ 1.72
PCDHA4-201ENST00000378125 SYNMO15061 1565 aa25.75■■□□□ 1.71
PCDHA4-201ENST00000378125 PPP2R1AP30153 589 aa25.75■■□□□ 1.71
PCDHA4-201ENST00000378125 FAM69CQ0P6D2 419 aa25.74■■□□□ 1.71
PCDHA4-201ENST00000378125 MYOM1P52179 1685 aa25.74■■□□□ 1.71
PCDHA4-201ENST00000378125 ERVK-7P63135 1459 aa25.74■■□□□ 1.71
PCDHA4-201ENST00000378125 CAMSAP1Q5T5Y3 1602 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 CDCA7LQ96GN5 454 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 NRXN1Q9ULB1 1477 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 SIGLEC1Q9BZZ2 1709 aa25.73■■□□□ 1.71
PCDHA4-201ENST00000378125 RICTORQ6R327 1708 aa25.72■■□□□ 1.71
PCDHA4-201ENST00000378125 KDM5AP29375 1690 aaKnown RBP25.72■■□□□ 1.71
PCDHA4-201ENST00000378125 RBM19Q9Y4C8 960 aaKnown RBP25.72■■□□□ 1.71
PCDHA4-201ENST00000378125 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
PCDHA4-201ENST00000378125 CENPJQ9HC77 1338 aaPredicted RBP25.69■■□□□ 1.7
PCDHA4-201ENST00000378125 C14orf93Q9H972 538 aaKnown RBP25.69■■□□□ 1.7
PCDHA4-201ENST00000378125 PPLO60437 1756 aa25.69■■□□□ 1.7
PCDHA4-201ENST00000378125 ASXL1Q8IXJ9 1541 aa25.68■■□□□ 1.7
PCDHA4-201ENST00000378125 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
PCDHA4-201ENST00000378125 PIK3C2GO75747 1445 aa25.68■■□□□ 1.7
PCDHA4-201ENST00000378125 CARD14Q9BXL6 1004 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 IDI1Q13907 227 aa25.66■■□□□ 1.7
PCDHA4-201ENST00000378125 BLMP54132 1417 aaPredicted RBP25.65■■□□□ 1.7
PCDHA4-201ENST00000378125 WDR43Q15061 677 aaKnown RBP eCLIP25.64■■□□□ 1.7
PCDHA4-201ENST00000378125 TSPOAP1O95153 1857 aa25.63■■□□□ 1.69
PCDHA4-201ENST00000378125 RPGRIP1LQ68CZ1 1315 aa25.62■■□□□ 1.69
PCDHA4-201ENST00000378125 RCAN3Q9UKA8 241 aa25.62■■□□□ 1.69
PCDHA4-201ENST00000378125 SLC24A1O60721 1099 aa25.6■■□□□ 1.69
PCDHA4-201ENST00000378125 SETBP1Q9Y6X0 1596 aa25.6■■□□□ 1.69
PCDHA4-201ENST00000378125 PDE3BQ13370 1112 aa25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 SAFB2Q14151 953 aaKnown RBP eCLIP25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 ADGRB1O14514 1584 aa25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 VGFO15240 615 aaPredicted RBP25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 FBXO31Q5XUX0 539 aaPredicted RBP25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 SLC12A5Q9H2X9 1139 aa25.59■■□□□ 1.69
PCDHA4-201ENST00000378125 CCDC136Q96JN2 1154 aa25.58■■□□□ 1.69
PCDHA4-201ENST00000378125 RRP1P56182 461 aaKnown RBP25.58■■□□□ 1.68
PCDHA4-201ENST00000378125 MYO3AQ8NEV4 1616 aa25.58■■□□□ 1.68
PCDHA4-201ENST00000378125 GLI2P10070 1586 aa25.57■■□□□ 1.68
PCDHA4-201ENST00000378125 PIK3C2BO00750 1634 aa25.57■■□□□ 1.68
PCDHA4-201ENST00000378125 CCDC146Q8IYE0 955 aa25.57■■□□□ 1.68
PCDHA4-201ENST00000378125 QRICH2Q9H0J4 1663 aa25.56■■□□□ 1.68
PCDHA4-201ENST00000378125 STK26Q9P289 416 aa25.55■■□□□ 1.68
PCDHA4-201ENST00000378125 NEXMIFQ5QGS0 1516 aa25.55■■□□□ 1.68
PCDHA4-201ENST00000378125 TNNT2P45379 298 aaPredicted RBP25.54■■□□□ 1.68
PCDHA4-201ENST00000378125 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
PCDHA4-201ENST00000378125 DIP2BQ9P265 1576 aa25.54■■□□□ 1.68
PCDHA4-201ENST00000378125 ARHGAP31Q2M1Z3 1444 aa25.53■■□□□ 1.68
PCDHA4-201ENST00000378125 NPC1L1Q9UHC9 1359 aa25.53■■□□□ 1.68
PCDHA4-201ENST00000378125 MLECQ14165 292 aa25.52■■□□□ 1.68
PCDHA4-201ENST00000378125 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
PCDHA4-201ENST00000378125 INSRP06213 1382 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 PLIN1O60240 522 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 EXOC6Q8TAG9 804 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 ZMYM4Q5VZL5 1548 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 ZC3H13Q5T200 1668 aaKnown RBP25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 PLEKHH1Q9ULM0 1364 aa25.51■■□□□ 1.67
PCDHA4-201ENST00000378125 NSD3Q9BZ95 1437 aa25.5■■□□□ 1.67
PCDHA4-201ENST00000378125 MYO5BQ9ULV0 1848 aa25.5■■□□□ 1.67
PCDHA4-201ENST00000378125 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
PCDHA4-201ENST00000378125 PREX1Q8TCU6 1659 aa25.47■■□□□ 1.67
PCDHA4-201ENST00000378125 MORC1Q86VD1 984 aa25.46■■□□□ 1.67
PCDHA4-201ENST00000378125 STAG3Q9UJ98 1225 aa25.46■■□□□ 1.67
PCDHA4-201ENST00000378125 APAF1O14727 1248 aa25.43■■□□□ 1.66
PCDHA4-201ENST00000378125 EVC2Q86UK5 1308 aa25.43■■□□□ 1.66
PCDHA4-201ENST00000378125 ARHGEF28Q8N1W1 1705 aaKnown RBP25.42■■□□□ 1.66
PCDHA4-201ENST00000378125 TMEM131LA2VDJ0 1609 aa25.41■■□□□ 1.66
PCDHA4-201ENST00000378125 TULP4Q9NRJ4 1543 aa25.4■■□□□ 1.66
PCDHA4-201ENST00000378125 GOLGA2Q08379 1002 aa25.38■■□□□ 1.65
PCDHA4-201ENST00000378125 SRPK2P78362 688 aaKnown RBP25.38■■□□□ 1.65
PCDHA4-201ENST00000378125 DUSP27Q5VZP5 1158 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms