RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 MLECQ14165 292 aa14.57□□□□□ -0.08
PCDHGA1-201ENST00000378105 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
PCDHGA1-201ENST00000378105 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
PCDHGA1-201ENST00000378105 EFCAB6Q5THR3 1501 aa14.57□□□□□ -0.08
PCDHGA1-201ENST00000378105 NEFMP07197 916 aa14.56□□□□□ -0.08
PCDHGA1-201ENST00000378105 FOXD1Q16676 465 aa14.56□□□□□ -0.08
PCDHGA1-201ENST00000378105 STRCQ7RTU9 1775 aa14.55□□□□□ -0.08
PCDHGA1-201ENST00000378105 RTEL1-TNFRSF6BF6WH68 1400 aa14.55□□□□□ -0.08
PCDHGA1-201ENST00000378105 NCOA1Q15788 1441 aa14.55□□□□□ -0.08
PCDHGA1-201ENST00000378105 TMEM131LA2VDJ0 1609 aa14.55□□□□□ -0.08
PCDHGA1-201ENST00000378105 ANP32CO43423 234 aa14.54□□□□□ -0.08
PCDHGA1-201ENST00000378105 ARXQ96QS3 562 aa14.54□□□□□ -0.08
PCDHGA1-201ENST00000378105 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
PCDHGA1-201ENST00000378105 ATP10AO60312 1499 aa14.53□□□□□ -0.08
PCDHGA1-201ENST00000378105 LAS1LQ9Y4W2 734 aaKnown RBP14.53□□□□□ -0.08
PCDHGA1-201ENST00000378105 ROCK1Q13464 1354 aa14.53□□□□□ -0.08
PCDHGA1-201ENST00000378105 SPATA31D1Q6ZQQ2 1576 aa14.52□□□□□ -0.08
PCDHGA1-201ENST00000378105 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
PCDHGA1-201ENST00000378105 YEATS2Q9ULM3 1422 aa14.51□□□□□ -0.09
PCDHGA1-201ENST00000378105 ABCC3O15438 1527 aa14.51□□□□□ -0.09
PCDHGA1-201ENST00000378105 HNRNPMP52272 730 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHGA1-201ENST00000378105 MYO3AQ8NEV4 1616 aa14.5□□□□□ -0.09
PCDHGA1-201ENST00000378105 ZNF644Q9H582 1327 aaPredicted RBP14.5□□□□□ -0.09
PCDHGA1-201ENST00000378105 GGT6Q6P531 493 aa14.49□□□□□ -0.09
PCDHGA1-201ENST00000378105 ARHGAP5Q13017 1502 aa14.49□□□□□ -0.09
PCDHGA1-201ENST00000378105 DUOX2Q9NRD8 1548 aa14.48□□□□□ -0.09
PCDHGA1-201ENST00000378105 MARF1Q9Y4F3 1742 aaKnown RBP14.47□□□□□ -0.09
PCDHGA1-201ENST00000378105 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA1-201ENST00000378105 EFCAB2Q5VUJ9 269 aa14.46□□□□□ -0.09
PCDHGA1-201ENST00000378105 IQGAP1P46940 1657 aa14.45□□□□□ -0.1
PCDHGA1-201ENST00000378105 TRPM1Q7Z4N2 1603 aa14.45□□□□□ -0.1
PCDHGA1-201ENST00000378105 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
PCDHGA1-201ENST00000378105 TRPM2O94759 1503 aa14.43□□□□□ -0.1
PCDHGA1-201ENST00000378105 KIAA1210Q9ULL0 1709 aa14.43□□□□□ -0.1
PCDHGA1-201ENST00000378105 ERBINQ96RT1 1412 aa14.43□□□□□ -0.1
PCDHGA1-201ENST00000378105 LAMC1P11047 1609 aa14.43□□□□□ -0.1
PCDHGA1-201ENST00000378105 PPP1R15AO75807 674 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA1-201ENST00000378105 MAPK8IP2Q13387 824 aaPredicted RBP14.43□□□□□ -0.1
PCDHGA1-201ENST00000378105 UGGT1Q9NYU2 1555 aa14.42□□□□□ -0.1
PCDHGA1-201ENST00000378105 ADGRB3O60242 1522 aa14.42□□□□□ -0.1
PCDHGA1-201ENST00000378105 VGLL3A8MV65 326 aa14.42□□□□□ -0.1
PCDHGA1-201ENST00000378105 TEX14Q8IWB6 1497 aa14.42□□□□□ -0.1
PCDHGA1-201ENST00000378105 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
PCDHGA1-201ENST00000378105 ADGRL1O94910 1474 aa14.42□□□□□ -0.1
PCDHGA1-201ENST00000378105 BRD2P25440 801 aaKnown RBP14.41□□□□□ -0.1
PCDHGA1-201ENST00000378105 C14orf37Q86TY3 774 aa14.41□□□□□ -0.1
PCDHGA1-201ENST00000378105 PTPRTO14522 1441 aa14.41□□□□□ -0.1
PCDHGA1-201ENST00000378105 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
PCDHGA1-201ENST00000378105 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
PCDHGA1-201ENST00000378105 MYOM1P52179 1685 aa14.4□□□□□ -0.1
PCDHGA1-201ENST00000378105 KNDC1Q76NI1 1749 aa14.39□□□□□ -0.11
PCDHGA1-201ENST00000378105 ALKQ9UM73 1620 aa14.39□□□□□ -0.11
PCDHGA1-201ENST00000378105 HSP90AA1P07900 732 aaKnown RBP14.38□□□□□ -0.11
PCDHGA1-201ENST00000378105 ARID3AQ99856 593 aa14.38□□□□□ -0.11
PCDHGA1-201ENST00000378105 ZBTB47Q9UFB7 747 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA1-201ENST00000378105 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
PCDHGA1-201ENST00000378105 CANXP27824 592 aaKnown RBP14.37□□□□□ -0.11
PCDHGA1-201ENST00000378105 GTF2E1P29083 439 aaPredicted RBP14.37□□□□□ -0.11
PCDHGA1-201ENST00000378105 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
PCDHGA1-201ENST00000378105 PKD2Q13563 968 aa14.37□□□□□ -0.11
PCDHGA1-201ENST00000378105 KIF3BO15066 747 aa14.36□□□□□ -0.11
PCDHGA1-201ENST00000378105 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
PCDHGA1-201ENST00000378105 RIMS1Q86UR5 1692 aaKnown RBP14.35□□□□□ -0.11
PCDHGA1-201ENST00000378105 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
PCDHGA1-201ENST00000378105 EIF4G2P78344 907 aaKnown RBP eCLIP14.35□□□□□ -0.11
PCDHGA1-201ENST00000378105 RAB3GAP2Q9H2M9 1393 aa14.35□□□□□ -0.11
PCDHGA1-201ENST00000378105 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
PCDHGA1-201ENST00000378105 PLEKHH2Q8IVE3 1493 aa14.33□□□□□ -0.11
PCDHGA1-201ENST00000378105 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.11
PCDHGA1-201ENST00000378105 SPAG9O60271 1321 aaKnown RBP14.32□□□□□ -0.12
PCDHGA1-201ENST00000378105 NUP155O75694 1391 aa14.32□□□□□ -0.12
PCDHGA1-201ENST00000378105 KIF1BO60333 1816 aa14.32□□□□□ -0.12
PCDHGA1-201ENST00000378105 ARHGEF28Q8N1W1 1705 aaKnown RBP14.32□□□□□ -0.12
PCDHGA1-201ENST00000378105 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
PCDHGA1-201ENST00000378105 ZHX1Q9UKY1 873 aaPredicted RBP14.31□□□□□ -0.12
PCDHGA1-201ENST00000378105 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
PCDHGA1-201ENST00000378105 NOS1P29475 1434 aa14.31□□□□□ -0.12
PCDHGA1-201ENST00000378105 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PCDHGA1-201ENST00000378105 XRN1Q8IZH2 1706 aaKnown RBP14.3□□□□□ -0.12
PCDHGA1-201ENST00000378105 CRYBG1Q9Y4K1 1723 aa14.3□□□□□ -0.12
PCDHGA1-201ENST00000378105 FAM69CQ0P6D2 419 aa14.3□□□□□ -0.12
PCDHGA1-201ENST00000378105 SECISBP2LQ93073 1101 aaKnown RBP14.3□□□□□ -0.12
PCDHGA1-201ENST00000378105 TMC1Q8TDI8 760 aa14.29□□□□□ -0.12
PCDHGA1-201ENST00000378105 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
PCDHGA1-201ENST00000378105 ARHGAP31Q2M1Z3 1444 aa14.28□□□□□ -0.12
PCDHGA1-201ENST00000378105 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
PCDHGA1-201ENST00000378105 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
PCDHGA1-201ENST00000378105 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
PCDHGA1-201ENST00000378105 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
PCDHGA1-201ENST00000378105 A2MP01023 1474 aa14.27□□□□□ -0.12
PCDHGA1-201ENST00000378105 ANKRD30AQ9BXX3 1397 aa14.27□□□□□ -0.13
PCDHGA1-201ENST00000378105 STAC3Q96MF2 364 aa14.27□□□□□ -0.13
PCDHGA1-201ENST00000378105 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.13
PCDHGA1-201ENST00000378105 ANP32AP39687 249 aaKnown RBP14.26□□□□□ -0.13
PCDHGA1-201ENST00000378105 PRDM10Q9NQV6 1147 aa14.26□□□□□ -0.13
PCDHGA1-201ENST00000378105 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
PCDHGA1-201ENST00000378105 CHD2O14647 1828 aaKnown RBP14.25□□□□□ -0.13
PCDHGA1-201ENST00000378105 SAFB2Q14151 953 aaKnown RBP eCLIP14.25□□□□□ -0.13
PCDHGA1-201ENST00000378105 PTPRMP28827 1452 aa14.25□□□□□ -0.13
PCDHGA1-201ENST00000378105 USP54Q70EL1 1684 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms