RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
SF1-204ENST00000377390 C9orf84Q5VXU9 1444 aa15.4■□□□□ 0.06
SF1-204ENST00000377390 SCAPERQ9BY12 1400 aa15.4■□□□□ 0.06
SF1-204ENST00000377390 TRAK2O60296 914 aa15.4■□□□□ 0.06
SF1-204ENST00000377390 PPP2R1AP30153 589 aa15.4■□□□□ 0.06
SF1-204ENST00000377390 CTTNBP2Q8WZ74 1663 aa15.4■□□□□ 0.06
SF1-204ENST00000377390 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
SF1-204ENST00000377390 ANP32BQ92688 251 aaKnown RBP15.4■□□□□ 0.06
SF1-204ENST00000377390 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
SF1-204ENST00000377390 ATP10BO94823 1461 aa15.39■□□□□ 0.05
SF1-204ENST00000377390 CAMSAP2Q08AD1 1489 aa15.39■□□□□ 0.05
SF1-204ENST00000377390 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
SF1-204ENST00000377390 PER1O15534 1290 aaPredicted RBP15.38■□□□□ 0.05
SF1-204ENST00000377390 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
SF1-204ENST00000377390 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
SF1-204ENST00000377390 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
SF1-204ENST00000377390 CCDC144AA2RUR9 1427 aa15.37■□□□□ 0.05
SF1-204ENST00000377390 HSCBQ8IWL3 235 aa15.37■□□□□ 0.05
SF1-204ENST00000377390 UGGT2Q9NYU1 1516 aa15.37■□□□□ 0.05
SF1-204ENST00000377390 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
SF1-204ENST00000377390 MCM4P33991 863 aa15.37■□□□□ 0.05
SF1-204ENST00000377390 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
SF1-204ENST00000377390 GPATCH8Q9UKJ3 1502 aaKnown RBP15.36■□□□□ 0.05
SF1-204ENST00000377390 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
SF1-204ENST00000377390 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
SF1-204ENST00000377390 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
SF1-204ENST00000377390 PDZRN3Q9UPQ7 1066 aa15.35■□□□□ 0.05
SF1-204ENST00000377390 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
SF1-204ENST00000377390 FAM69CQ0P6D2 419 aa15.35■□□□□ 0.05
SF1-204ENST00000377390 CGNL1Q0VF96 1302 aa15.34■□□□□ 0.05
SF1-204ENST00000377390 ESPNB1AK53 854 aa15.34■□□□□ 0.05
SF1-204ENST00000377390 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
SF1-204ENST00000377390 KIF14Q15058 1648 aa15.33■□□□□ 0.04
SF1-204ENST00000377390 E9PSI1 815 aa15.33■□□□□ 0.04
SF1-204ENST00000377390 PARD3Q8TEW0 1356 aa15.33■□□□□ 0.04
SF1-204ENST00000377390 SRPK2P78362 688 aaKnown RBP15.33■□□□□ 0.04
SF1-204ENST00000377390 TNNQ9UQP3 1299 aa15.33■□□□□ 0.04
SF1-204ENST00000377390 BCORL1Q5H9F3 1711 aa15.33■□□□□ 0.04
SF1-204ENST00000377390 ROCK1Q13464 1354 aa15.32■□□□□ 0.04
SF1-204ENST00000377390 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
SF1-204ENST00000377390 RWDD1Q9H446 243 aaPredicted RBP15.32■□□□□ 0.04
SF1-204ENST00000377390 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
SF1-204ENST00000377390 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
SF1-204ENST00000377390 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
SF1-204ENST00000377390 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
SF1-204ENST00000377390 CLCN1P35523 988 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 PMFBP1Q8TBY8 1022 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 ERCC6L2Q5T890 1561 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 PBRM1Q86U86 1689 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 FBLN1P23142 703 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
SF1-204ENST00000377390 KIAA1211Q6ZU35 1233 aa15.3■□□□□ 0.04
SF1-204ENST00000377390 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
SF1-204ENST00000377390 MRE11P49959 708 aa15.3■□□□□ 0.04
SF1-204ENST00000377390 TPRNQ4KMQ1 711 aa15.3■□□□□ 0.04
SF1-204ENST00000377390 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
SF1-204ENST00000377390 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
SF1-204ENST00000377390 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
SF1-204ENST00000377390 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
SF1-204ENST00000377390 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
SF1-204ENST00000377390 MSNP26038 577 aaKnown RBP15.28■□□□□ 0.04
SF1-204ENST00000377390 RBM33Q96EV2 1170 aaKnown RBP15.28■□□□□ 0.04
SF1-204ENST00000377390 ZHX1Q9UKY1 873 aaPredicted RBP15.28■□□□□ 0.04
SF1-204ENST00000377390 ITPRIPQ8IWB1 547 aa15.27■□□□□ 0.04
SF1-204ENST00000377390 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.04
SF1-204ENST00000377390 PZPP20742 1482 aa15.27■□□□□ 0.04
SF1-204ENST00000377390 WDR62O43379 1518 aa15.27■□□□□ 0.04
SF1-204ENST00000377390 CDCA8Q53HL2 280 aa15.27■□□□□ 0.04
SF1-204ENST00000377390 KIAA0556O60303 1618 aa15.27■□□□□ 0.03
SF1-204ENST00000377390 TCOF1Q13428 1488 aaKnown RBP15.26■□□□□ 0.03
SF1-204ENST00000377390 FBXO31Q5XUX0 539 aaPredicted RBP15.26■□□□□ 0.03
SF1-204ENST00000377390 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
SF1-204ENST00000377390 USP19O94966 1318 aa15.26■□□□□ 0.03
SF1-204ENST00000377390 SLC12A5Q9H2X9 1139 aa15.25■□□□□ 0.03
SF1-204ENST00000377390 CABP2Q9NPB3 220 aa15.25■□□□□ 0.03
SF1-204ENST00000377390 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
SF1-204ENST00000377390 TESK2Q96S53 571 aa15.25■□□□□ 0.03
SF1-204ENST00000377390 MORC1Q86VD1 984 aa15.24■□□□□ 0.03
SF1-204ENST00000377390 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
SF1-204ENST00000377390 GOLGA6L22H0YM25 854 aa15.24■□□□□ 0.03
SF1-204ENST00000377390 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
SF1-204ENST00000377390 DDX11L8A8MPP1 907 aa15.23■□□□□ 0.03
SF1-204ENST00000377390 GBP4Q96PP9 640 aa15.23■□□□□ 0.03
SF1-204ENST00000377390 LRRIQ1Q96JM4 1722 aa15.23■□□□□ 0.03
SF1-204ENST00000377390 RLBP1P12271 317 aa15.22■□□□□ 0.03
SF1-204ENST00000377390 SMC4Q9NTJ3 1288 aa15.22■□□□□ 0.03
SF1-204ENST00000377390 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
SF1-204ENST00000377390 TRAPPC8Q9Y2L5 1435 aa15.22■□□□□ 0.03
SF1-204ENST00000377390 ADGRF5Q8IZF2 1346 aa15.22■□□□□ 0.03
SF1-204ENST00000377390 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
SF1-204ENST00000377390 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.034e-10■■■■■ 47.9
SF1-204ENST00000377390 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
SF1-204ENST00000377390 RALGAPBQ86X10 1494 aa15.21■□□□□ 0.03
SF1-204ENST00000377390 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.03
SF1-204ENST00000377390 SAMD9Q5K651 1589 aa15.21■□□□□ 0.03
SF1-204ENST00000377390 ERBINQ96RT1 1412 aa15.21■□□□□ 0.03
SF1-204ENST00000377390 DNTTIP2Q5QJE6 756 aaKnown RBP15.2■□□□□ 0.02
SF1-204ENST00000377390 WWC1Q8IX03 1113 aa15.2■□□□□ 0.02
SF1-204ENST00000377390 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms