RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 TIAM1Q13009 1591 aa22.27■■□□□ 1.16
CLSTN1-202ENST00000377298 PTMSP20962 102 aa22.27■■□□□ 1.16
CLSTN1-202ENST00000377298 NEXNQ0ZGT2 675 aa22.27■■□□□ 1.16
CLSTN1-202ENST00000377298 CENPQQ7L2Z9 268 aaPredicted RBP22.26■■□□□ 1.15
CLSTN1-202ENST00000377298 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
CLSTN1-202ENST00000377298 CNTLNQ9NXG0 1405 aa22.26■■□□□ 1.15
CLSTN1-202ENST00000377298 GGNBP2Q9H3C7 697 aa22.25■■□□□ 1.15
CLSTN1-202ENST00000377298 HTATSF1O43719 755 aaKnown RBP22.25■■□□□ 1.15
CLSTN1-202ENST00000377298 THEMISQ8N1K5 641 aaPredicted RBP22.25■■□□□ 1.15
CLSTN1-202ENST00000377298 API5Q9BZZ5 524 aaKnown RBP22.24■■□□□ 1.15
CLSTN1-202ENST00000377298 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
CLSTN1-202ENST00000377298 RAPGEF4Q8WZA2 1011 aa22.22■■□□□ 1.15
CLSTN1-202ENST00000377298 EPRSP07814 1512 aaKnown RBP22.22■■□□□ 1.15
CLSTN1-202ENST00000377298 DAPK1P53355 1430 aa22.22■■□□□ 1.15
CLSTN1-202ENST00000377298 GNAI1P63096 354 aa22.22■■□□□ 1.15
CLSTN1-202ENST00000377298 FRAT2O75474 233 aaPredicted RBP22.21■■□□□ 1.15
CLSTN1-202ENST00000377298 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
CLSTN1-202ENST00000377298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.21■■□□□ 1.15
CLSTN1-202ENST00000377298 NLRP6P59044 892 aa22.21■■□□□ 1.15
CLSTN1-202ENST00000377298 DDX19BQ9UMR2 479 aa22.21■■□□□ 1.15
CLSTN1-202ENST00000377298 CLSTN1O94985 981 aa22.21■■□□□ 1.15
CLSTN1-202ENST00000377298 RAPGEF3O95398 923 aa22.2■■□□□ 1.14
CLSTN1-202ENST00000377298 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
CLSTN1-202ENST00000377298 MEX3CQ5U5Q3 659 aaKnown RBP22.2■■□□□ 1.14
CLSTN1-202ENST00000377298 PLIN1O60240 522 aa22.19■■□□□ 1.14
CLSTN1-202ENST00000377298 L1TD1Q5T7N2 865 aaKnown RBP22.19■■□□□ 1.14
CLSTN1-202ENST00000377298 GPRASP1Q5JY77 1395 aa22.19■■□□□ 1.14
CLSTN1-202ENST00000377298 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
CLSTN1-202ENST00000377298 COG6Q9Y2V7 657 aa22.19■■□□□ 1.14
CLSTN1-202ENST00000377298 ANKRD45Q5TZF3 282 aa22.18■■□□□ 1.14
CLSTN1-202ENST00000377298 C9orf78Q9NZ63 289 aaPredicted RBP22.18■■□□□ 1.14
CLSTN1-202ENST00000377298 MAGI1Q96QZ7 1491 aaPredicted RBP22.18■■□□□ 1.14
CLSTN1-202ENST00000377298 SLKQ9H2G2 1235 aaPredicted RBP22.17■■□□□ 1.14
CLSTN1-202ENST00000377298 RPGRIP1LQ68CZ1 1315 aa22.17■■□□□ 1.14
CLSTN1-202ENST00000377298 PRAM1Q96QH2 718 aa22.17■■□□□ 1.14
CLSTN1-202ENST00000377298 BRD4O60885 1362 aaPredicted RBP22.17■■□□□ 1.14
CLSTN1-202ENST00000377298 CUL7Q14999 1698 aa22.17■■□□□ 1.14
CLSTN1-202ENST00000377298 HSP90B1P14625 803 aaKnown RBP22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 CRBNQ96SW2 442 aa22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 ROCK1Q13464 1354 aa22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
CLSTN1-202ENST00000377298 MSH5O43196 834 aa22.15■■□□□ 1.14
CLSTN1-202ENST00000377298 HMOX1P09601 288 aa22.15■■□□□ 1.14
CLSTN1-202ENST00000377298 EXOC6Q8TAG9 804 aa22.15■■□□□ 1.14
CLSTN1-202ENST00000377298 NBPF1Q3BBV0 1214 aa22.15■■□□□ 1.14
CLSTN1-202ENST00000377298 PROSER2Q86WR7 435 aaPredicted RBP22.15■■□□□ 1.14
CLSTN1-202ENST00000377298 TSPYL4Q9UJ04 414 aa22.15■■□□□ 1.14
CLSTN1-202ENST00000377298 ST18O60284 1047 aa22.14■■□□□ 1.14
CLSTN1-202ENST00000377298 KIF16BQ96L93 1317 aa22.14■■□□□ 1.14
CLSTN1-202ENST00000377298 NAP1L5Q96NT1 182 aaPredicted RBP22.14■■□□□ 1.14
CLSTN1-202ENST00000377298 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.14
CLSTN1-202ENST00000377298 MTHFSP49914 203 aa22.14■■□□□ 1.13
CLSTN1-202ENST00000377298 NLRP2Q9NX02 1062 aa22.14■■□□□ 1.13
CLSTN1-202ENST00000377298 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
CLSTN1-202ENST00000377298 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
CLSTN1-202ENST00000377298 IPO9Q96P70 1041 aaKnown RBP22.12■■□□□ 1.13
CLSTN1-202ENST00000377298 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
CLSTN1-202ENST00000377298 SYAP1Q96A49 352 aaPredicted RBP22.12■■□□□ 1.13
CLSTN1-202ENST00000377298 LRRFIP1Q32MZ4 808 aaKnown RBP22.12■■□□□ 1.13
CLSTN1-202ENST00000377298 SYTL4Q96C24 671 aaPredicted RBP22.12■■□□□ 1.13
CLSTN1-202ENST00000377298 NUTM2GQ5VZR2 741 aa22.11■■□□□ 1.13
CLSTN1-202ENST00000377298 ABTB2Q8N961 1025 aa22.11■■□□□ 1.13
CLSTN1-202ENST00000377298 KIF3AQ9Y496 699 aa22.11■■□□□ 1.13
CLSTN1-202ENST00000377298 RILPL2Q969X0 211 aa22.11■■□□□ 1.13
CLSTN1-202ENST00000377298 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
CLSTN1-202ENST00000377298 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
CLSTN1-202ENST00000377298 CCDC34Q96HJ3 373 aa22.1■■□□□ 1.13
CLSTN1-202ENST00000377298 TOMM22Q9NS69 142 aa22.1■■□□□ 1.13
CLSTN1-202ENST00000377298 ZNF692Q9BU19 519 aaPredicted RBP22.09■■□□□ 1.13
CLSTN1-202ENST00000377298 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
CLSTN1-202ENST00000377298 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
CLSTN1-202ENST00000377298 FAM161AQ3B820 660 aa22.09■■□□□ 1.13
CLSTN1-202ENST00000377298 CSPP1Q1MSJ5 1256 aa22.08■■□□□ 1.13
CLSTN1-202ENST00000377298 DRC7Q8IY82 874 aa22.08■■□□□ 1.12
CLSTN1-202ENST00000377298 CHMP4CQ96CF2 233 aa22.07■■□□□ 1.12
CLSTN1-202ENST00000377298 PPP2R1AP30153 589 aa22.07■■□□□ 1.12
CLSTN1-202ENST00000377298 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
CLSTN1-202ENST00000377298 ANKLE2Q86XL3 938 aa22.07■■□□□ 1.12
CLSTN1-202ENST00000377298 ADAMTS8Q9UP79 889 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 ERBINQ96RT1 1412 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 AAMPQ13685 434 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 GAS2L2Q8NHY3 880 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
CLSTN1-202ENST00000377298 RUFY2Q8WXA3 655 aa22.05■■□□□ 1.12
CLSTN1-202ENST00000377298 PLB1Q6P1J6 1458 aa22.04■■□□□ 1.12
CLSTN1-202ENST00000377298 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
CLSTN1-202ENST00000377298 NOL8Q76FK4 1167 aaKnown RBP22.03■■□□□ 1.12
CLSTN1-202ENST00000377298 SLC12A5Q9H2X9 1139 aa22.03■■□□□ 1.12
CLSTN1-202ENST00000377298 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
CLSTN1-202ENST00000377298 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
CLSTN1-202ENST00000377298 HSP90AB4PQ58FF6 505 aa22.03■■□□□ 1.12
CLSTN1-202ENST00000377298 IFIT2P09913 472 aaKnown RBP22.03■■□□□ 1.12
CLSTN1-202ENST00000377298 CHAF1AQ13111 956 aaPredicted RBP22.02■■□□□ 1.12
CLSTN1-202ENST00000377298 G3BP1Q13283 466 aaKnown RBP eCLIP22.02■■□□□ 1.123e-6■■□□□ 12.9
CLSTN1-202ENST00000377298 NAIPQ13075 1403 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms