RNA–Protein interactions for RNA: ENST00000376935.4

SMIM13-201, Transcript of small integral membrane protein 13, humanhuman

TSL 5

Gene SMIM13, Length 1,251 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-201ENST00000376935 ZNF428Q96B54 188 aa9.92□□□□□ -0.82
SMIM13-201ENST00000376935 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMIM13-201ENST00000376935 GPCPD1Q9NPB8 672 aa9.92□□□□□ -0.82
SMIM13-201ENST00000376935 A0A0G2JS52 829 aa9.91□□□□□ -0.82
SMIM13-201ENST00000376935 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
SMIM13-201ENST00000376935 IGSF3O75054 1194 aa9.91□□□□□ -0.82
SMIM13-201ENST00000376935 PPP1R15AO75807 674 aaPredicted RBP9.91□□□□□ -0.82
SMIM13-201ENST00000376935 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.82
SMIM13-201ENST00000376935 SLC34A2O95436 690 aa9.9□□□□□ -0.82
SMIM13-201ENST00000376935 MDM2Q00987 491 aaPredicted RBP9.9□□□□□ -0.82
SMIM13-201ENST00000376935 SNRKQ9NRH2 765 aa9.9□□□□□ -0.82
SMIM13-201ENST00000376935 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
SMIM13-201ENST00000376935 RBM25P49756 843 aaKnown RBP9.89□□□□□ -0.83
SMIM13-201ENST00000376935 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
SMIM13-201ENST00000376935 PHOX2BQ99453 314 aa9.89□□□□□ -0.83
SMIM13-201ENST00000376935 BEGAINQ9BUH8 593 aa9.89□□□□□ -0.83
SMIM13-201ENST00000376935 ATP1B4Q9UN42 357 aaPredicted RBP9.87□□□□□ -0.83
SMIM13-201ENST00000376935 UPF1Q92900 1129 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMIM13-201ENST00000376935 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
SMIM13-201ENST00000376935 TBC1D12O60347 775 aa9.85□□□□□ -0.83
SMIM13-201ENST00000376935 PTPN5P54829 565 aa9.85□□□□□ -0.83
SMIM13-201ENST00000376935 MYSM1Q5VVJ2 828 aa9.85□□□□□ -0.83
SMIM13-201ENST00000376935 LCE2BO14633 110 aa9.84□□□□□ -0.83
SMIM13-201ENST00000376935 RFC5P40937 340 aa9.84□□□□□ -0.83
SMIM13-201ENST00000376935 PDE4CQ08493 712 aa9.84□□□□□ -0.83
SMIM13-201ENST00000376935 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
SMIM13-201ENST00000376935 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
SMIM13-201ENST00000376935 ACIN1Q9UKV3 1341 aaKnown RBP9.83□□□□□ -0.84
SMIM13-201ENST00000376935 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
SMIM13-201ENST00000376935 SHROOM4Q9ULL8 1493 aa9.83□□□□□ -0.84
SMIM13-201ENST00000376935 CLK2P49760 499 aaKnown RBP9.82□□□□□ -0.84
SMIM13-201ENST00000376935 CDHR5Q9HBB8 845 aa9.81□□□□□ -0.84
SMIM13-201ENST00000376935 PATL2C9JE40 543 aaKnown RBP9.8□□□□□ -0.84
SMIM13-201ENST00000376935 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
SMIM13-201ENST00000376935 CALR3Q96L12 384 aaKnown RBP9.8□□□□□ -0.84
SMIM13-201ENST00000376935 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
SMIM13-201ENST00000376935 E9PSI1 815 aa9.79□□□□□ -0.84
SMIM13-201ENST00000376935 EVI5O60447 810 aa9.79□□□□□ -0.84
SMIM13-201ENST00000376935 Q6ZNB5 142 aa9.79□□□□□ -0.84
SMIM13-201ENST00000376935 MTMR14Q8NCE2 650 aa9.79□□□□□ -0.84
SMIM13-201ENST00000376935 PSDA5PKW4 1024 aaPredicted RBP9.78□□□□□ -0.84
SMIM13-201ENST00000376935 KCNA1Q09470 495 aa9.78□□□□□ -0.84
SMIM13-201ENST00000376935 POM121CA8CG34 1229 aa9.77□□□□□ -0.85
SMIM13-201ENST00000376935 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
SMIM13-201ENST00000376935 GLMNQ92990 594 aa9.77□□□□□ -0.85
SMIM13-201ENST00000376935 BRD1O95696 1058 aa9.76□□□□□ -0.85
SMIM13-201ENST00000376935 TBC1D2Q9BYX2 928 aa9.76□□□□□ -0.85
SMIM13-201ENST00000376935 THSD4Q6ZMP0 1018 aa9.75□□□□□ -0.85
SMIM13-201ENST00000376935 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
SMIM13-201ENST00000376935 EN1Q05925 392 aaPredicted RBP9.74□□□□□ -0.85
SMIM13-201ENST00000376935 NLRP7Q8WX94 980 aa9.74□□□□□ -0.85
SMIM13-201ENST00000376935 PBXIP1Q96AQ6 731 aa9.74□□□□□ -0.85
SMIM13-201ENST00000376935 VPS9D1Q9Y2B5 631 aa9.74□□□□□ -0.85
SMIM13-201ENST00000376935 METTL3Q86U44 580 aaKnown RBP9.73□□□□□ -0.85
SMIM13-201ENST00000376935 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
SMIM13-201ENST00000376935 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
SMIM13-201ENST00000376935 SOCS7O14512 581 aa9.72□□□□□ -0.85
SMIM13-201ENST00000376935 ABL2P42684 1182 aa9.72□□□□□ -0.85
SMIM13-201ENST00000376935 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.86
SMIM13-201ENST00000376935 FAM161AQ3B820 660 aa9.71□□□□□ -0.86
SMIM13-201ENST00000376935 ANO8Q9HCE9 1232 aaPredicted RBP9.71□□□□□ -0.86
SMIM13-201ENST00000376935 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
SMIM13-201ENST00000376935 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
SMIM13-201ENST00000376935 STAC3Q96MF2 364 aa9.7□□□□□ -0.86
SMIM13-201ENST00000376935 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
SMIM13-201ENST00000376935 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
SMIM13-201ENST00000376935 MAP3K7O43318 606 aa9.69□□□□□ -0.86
SMIM13-201ENST00000376935 OATP04181 439 aa9.69□□□□□ -0.86
SMIM13-201ENST00000376935 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
SMIM13-201ENST00000376935 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
SMIM13-201ENST00000376935 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
SMIM13-201ENST00000376935 EPAS1Q99814 870 aa9.68□□□□□ -0.86
SMIM13-201ENST00000376935 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.67□□□□□ -0.86
SMIM13-201ENST00000376935 PHF14O94880 888 aa9.67□□□□□ -0.86
SMIM13-201ENST00000376935 TUSC1Q2TAM9 212 aa9.67□□□□□ -0.86
SMIM13-201ENST00000376935 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
SMIM13-201ENST00000376935 CFAP70Q5T0N1 1121 aa9.67□□□□□ -0.86
SMIM13-201ENST00000376935 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
SMIM13-201ENST00000376935 PRM3Q9NNZ6 103 aa9.67□□□□□ -0.86
SMIM13-201ENST00000376935 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
SMIM13-201ENST00000376935 CCDC27Q2M243 656 aa9.66□□□□□ -0.86
SMIM13-201ENST00000376935 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
SMIM13-201ENST00000376935 ADAMTS19Q8TE59 1207 aa9.66□□□□□ -0.86
SMIM13-201ENST00000376935 CARNS1A5YM72 827 aa9.65□□□□□ -0.86
SMIM13-201ENST00000376935 RFX1P22670 979 aa9.65□□□□□ -0.86
SMIM13-201ENST00000376935 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
SMIM13-201ENST00000376935 RBM33Q96EV2 1170 aaKnown RBP9.65□□□□□ -0.86
SMIM13-201ENST00000376935 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
SMIM13-201ENST00000376935 SPIRE2Q8WWL2 714 aa9.64□□□□□ -0.87
SMIM13-201ENST00000376935 IVNS1ABPQ9Y6Y0 642 aa9.64□□□□□ -0.87
SMIM13-201ENST00000376935 SPTLC1O15269 473 aa9.63□□□□□ -0.87
SMIM13-201ENST00000376935 SND1Q7KZF4 910 aaKnown RBP eCLIP9.62□□□□□ -0.87
SMIM13-201ENST00000376935 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
SMIM13-201ENST00000376935 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
SMIM13-201ENST00000376935 ITGBL1O95965 494 aaPredicted RBP9.61□□□□□ -0.87
SMIM13-201ENST00000376935 PADI6Q6TGC4 694 aa9.61□□□□□ -0.87
SMIM13-201ENST00000376935 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
SMIM13-201ENST00000376935 WNT2BQ93097 391 aa9.6□□□□□ -0.87
SMIM13-201ENST00000376935 LILRB3O75022 631 aa9.59□□□□□ -0.87
SMIM13-201ENST00000376935 AP1G2O75843 785 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms