RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 PRKRIP1Q9H875 184 aaPredicted RBP23.24■■□□□ 1.31
HLA-A-202ENST00000376806 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
HLA-A-202ENST00000376806 NRXN1Q9ULB1 1477 aa23.21■■□□□ 1.31
HLA-A-202ENST00000376806 AGLP35573 1532 aa23.2■■□□□ 1.3
HLA-A-202ENST00000376806 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
HLA-A-202ENST00000376806 TESK2Q96S53 571 aa23.17■■□□□ 1.3
HLA-A-202ENST00000376806 MLECQ14165 292 aa23.15■■□□□ 1.3
HLA-A-202ENST00000376806 DISP3Q9P2K9 1392 aa23.15■■□□□ 1.3
HLA-A-202ENST00000376806 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
HLA-A-202ENST00000376806 SETBP1Q9Y6X0 1596 aa23.13■■□□□ 1.29
HLA-A-202ENST00000376806 ADGRF5Q8IZF2 1346 aa23.12■■□□□ 1.29
HLA-A-202ENST00000376806 CLTCQ00610 1675 aaKnown RBP23.12■■□□□ 1.29
HLA-A-202ENST00000376806 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
HLA-A-202ENST00000376806 CHGAP10645 457 aaKnown RBP23.1■■□□□ 1.29
HLA-A-202ENST00000376806 NEXMIFQ5QGS0 1516 aa23.1■■□□□ 1.29
HLA-A-202ENST00000376806 EIF3AQ14152 1382 aaKnown RBP23.1■■□□□ 1.29
HLA-A-202ENST00000376806 PIK3C2GO75747 1445 aa23.09■■□□□ 1.29
HLA-A-202ENST00000376806 TMF1P82094 1093 aa23.09■■□□□ 1.29
HLA-A-202ENST00000376806 CCDC184Q52MB2 194 aa23.09■■□□□ 1.29
HLA-A-202ENST00000376806 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
HLA-A-202ENST00000376806 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
HLA-A-202ENST00000376806 KDM5AP29375 1690 aaKnown RBP23.05■■□□□ 1.28
HLA-A-202ENST00000376806 CFAP70Q5T0N1 1121 aa23.05■■□□□ 1.28
HLA-A-202ENST00000376806 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
HLA-A-202ENST00000376806 MYOM1P52179 1685 aa23.05■■□□□ 1.28
HLA-A-202ENST00000376806 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
HLA-A-202ENST00000376806 KTN1Q86UP2 1357 aaKnown RBP23.03■■□□□ 1.28
HLA-A-202ENST00000376806 ADGRB1O14514 1584 aa23.03■■□□□ 1.28
HLA-A-202ENST00000376806 SLC52A1Q9NWF4 448 aa23■■□□□ 1.27
HLA-A-202ENST00000376806 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
HLA-A-202ENST00000376806 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
HLA-A-202ENST00000376806 QRICH2Q9H0J4 1663 aa22.99■■□□□ 1.27
HLA-A-202ENST00000376806 IDI1Q13907 227 aa22.98■■□□□ 1.27
HLA-A-202ENST00000376806 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
HLA-A-202ENST00000376806 CNGB1Q14028 1251 aaPredicted RBP22.97■■□□□ 1.27
HLA-A-202ENST00000376806 ARHGEF28Q8N1W1 1705 aaKnown RBP22.95■■□□□ 1.27
HLA-A-202ENST00000376806 C14orf93Q9H972 538 aaKnown RBP22.95■■□□□ 1.26
HLA-A-202ENST00000376806 ZFYVE9O95405 1425 aa22.95■■□□□ 1.26
HLA-A-202ENST00000376806 RALBP1Q15311 655 aa22.94■■□□□ 1.26
HLA-A-202ENST00000376806 CDCA8Q53HL2 280 aa22.94■■□□□ 1.26
HLA-A-202ENST00000376806 PARD3Q8TEW0 1356 aa22.94■■□□□ 1.26
HLA-A-202ENST00000376806 PER1O15534 1290 aaPredicted RBP22.94■■□□□ 1.26
HLA-A-202ENST00000376806 SBNO2Q9Y2G9 1366 aa22.93■■□□□ 1.26
HLA-A-202ENST00000376806 FAM9BQ8IZU0 186 aa22.93■■□□□ 1.26
HLA-A-202ENST00000376806 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
HLA-A-202ENST00000376806 FBXO31Q5XUX0 539 aaPredicted RBP22.92■■□□□ 1.26
HLA-A-202ENST00000376806 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
HLA-A-202ENST00000376806 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
HLA-A-202ENST00000376806 PANK3Q9H999 370 aa22.91■■□□□ 1.26
HLA-A-202ENST00000376806 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
HLA-A-202ENST00000376806 SLC24A1O60721 1099 aa22.89■■□□□ 1.25
HLA-A-202ENST00000376806 ZMYM3Q14202 1370 aa22.89■■□□□ 1.25
HLA-A-202ENST00000376806 ADAMTSL3P82987 1691 aa22.88■■□□□ 1.25
HLA-A-202ENST00000376806 ASXL1Q8IXJ9 1541 aa22.88■■□□□ 1.25
HLA-A-202ENST00000376806 FER1L4A9Z1Z3 1794 aa22.87■■□□□ 1.25
HLA-A-202ENST00000376806 CENPJQ9HC77 1338 aaPredicted RBP22.87■■□□□ 1.25
HLA-A-202ENST00000376806 CEBPAP49715 358 aaPredicted RBP22.87■■□□□ 1.25
HLA-A-202ENST00000376806 NUTM2DQ5VT03 806 aaPredicted RBP22.86■■□□□ 1.25
HLA-A-202ENST00000376806 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
HLA-A-202ENST00000376806 TMC1Q8TDI8 760 aa22.83■■□□□ 1.24
HLA-A-202ENST00000376806 TRAK1Q9UPV9 953 aa22.83■■□□□ 1.24
HLA-A-202ENST00000376806 A2ML1A8K2U0 1454 aa22.82■■□□□ 1.24
HLA-A-202ENST00000376806 TMEM132EQ6IEE7 984 aa22.82■■□□□ 1.24
HLA-A-202ENST00000376806 ZBED9Q6R2W3 1325 aa22.82■■□□□ 1.24
HLA-A-202ENST00000376806 RIMS1Q86UR5 1692 aaKnown RBP22.81■■□□□ 1.24
HLA-A-202ENST00000376806 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
HLA-A-202ENST00000376806 NLRP13Q86W25 1043 aa22.81■■□□□ 1.24
HLA-A-202ENST00000376806 PNISRQ8TF01 805 aaKnown RBP22.8■■□□□ 1.24
HLA-A-202ENST00000376806 LRPPRCP42704 1394 aaKnown RBP22.79■■□□□ 1.24
HLA-A-202ENST00000376806 CC2D1BQ5T0F9 858 aaKnown RBP22.79■■□□□ 1.24
HLA-A-202ENST00000376806 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
HLA-A-202ENST00000376806 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
HLA-A-202ENST00000376806 C3P01024 1663 aa22.77■■□□□ 1.24
HLA-A-202ENST00000376806 STAG3Q9UJ98 1225 aa22.77■■□□□ 1.24
HLA-A-202ENST00000376806 KNSTRNQ9Y448 316 aa22.77■■□□□ 1.24
HLA-A-202ENST00000376806 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
HLA-A-202ENST00000376806 TULP4Q9NRJ4 1543 aa22.76■■□□□ 1.23
HLA-A-202ENST00000376806 RIMS2Q9UQ26 1411 aa22.75■■□□□ 1.23
HLA-A-202ENST00000376806 NPC1L1Q9UHC9 1359 aa22.74■■□□□ 1.23
HLA-A-202ENST00000376806 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
HLA-A-202ENST00000376806 UBR1Q8IWV7 1749 aa22.73■■□□□ 1.23
HLA-A-202ENST00000376806 PTPRMP28827 1452 aa22.73■■□□□ 1.23
HLA-A-202ENST00000376806 NRXN3Q9Y4C0 1643 aa22.72■■□□□ 1.23
HLA-A-202ENST00000376806 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
HLA-A-202ENST00000376806 USP32Q8NFA0 1604 aa22.7■■□□□ 1.22
HLA-A-202ENST00000376806 TNRQ92752 1358 aa22.7■■□□□ 1.22
HLA-A-202ENST00000376806 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
HLA-A-202ENST00000376806 DLC1Q96QB1 1528 aa22.66■■□□□ 1.22
HLA-A-202ENST00000376806 EVC2Q86UK5 1308 aa22.65■■□□□ 1.22
HLA-A-202ENST00000376806 NEFLP07196 543 aa22.65■■□□□ 1.22
HLA-A-202ENST00000376806 PUS7Q96PZ0 661 aaKnown RBP22.64■■□□□ 1.22
HLA-A-202ENST00000376806 STK26Q9P289 416 aa22.64■■□□□ 1.21
HLA-A-202ENST00000376806 INSRP06213 1382 aa22.64■■□□□ 1.21
HLA-A-202ENST00000376806 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
HLA-A-202ENST00000376806 KNDC1Q76NI1 1749 aa22.63■■□□□ 1.21
HLA-A-202ENST00000376806 FKBP8Q14318 412 aa22.62■■□□□ 1.21
HLA-A-202ENST00000376806 CARD14Q9BXL6 1004 aa22.62■■□□□ 1.21
HLA-A-202ENST00000376806 BLMP54132 1417 aaPredicted RBP22.62■■□□□ 1.21
HLA-A-202ENST00000376806 NSD3Q9BZ95 1437 aa22.62■■□□□ 1.21
HLA-A-202ENST00000376806 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms