RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
DDR1-227ENST00000376570 CEP170Q5SW79 1584 aa15.07■□□□□ 0
DDR1-227ENST00000376570 PRAM1Q96QH2 718 aa15.06■□□□□ 0
DDR1-227ENST00000376570 DENND4BO75064 1496 aaPredicted RBP15.06■□□□□ 0
DDR1-227ENST00000376570 PBRM1Q86U86 1689 aa15.06■□□□□ 0
DDR1-227ENST00000376570 ERBINQ96RT1 1412 aa15.06■□□□□ 0
DDR1-227ENST00000376570 SMC4Q9NTJ3 1288 aa15.05■□□□□ 0
DDR1-227ENST00000376570 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ 0
DDR1-227ENST00000376570 NECTIN2Q92692 538 aa15.05■□□□□ -0
DDR1-227ENST00000376570 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
DDR1-227ENST00000376570 TCP11L2Q8N4U5 519 aa15.05■□□□□ -0
DDR1-227ENST00000376570 TESK2Q96S53 571 aa15.05■□□□□ -0
DDR1-227ENST00000376570 TXNDC2Q86VQ3 553 aa15.04■□□□□ -0
DDR1-227ENST00000376570 A0A0G2JS52 829 aa15.04■□□□□ -0
DDR1-227ENST00000376570 HSP90AA1P07900 732 aaKnown RBP15.04■□□□□ -0
DDR1-227ENST00000376570 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
DDR1-227ENST00000376570 TNNQ9UQP3 1299 aa15.03■□□□□ -0
DDR1-227ENST00000376570 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
DDR1-227ENST00000376570 IDI1Q13907 227 aa15.02□□□□□ -0.01
DDR1-227ENST00000376570 FOXD4L1Q9NU39 408 aa15.02□□□□□ -0.01
DDR1-227ENST00000376570 DHX29Q7Z478 1369 aaKnown RBP15.02□□□□□ -0.01
DDR1-227ENST00000376570 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
DDR1-227ENST00000376570 ANO8Q9HCE9 1232 aaPredicted RBP15.01□□□□□ -0.01
DDR1-227ENST00000376570 CABP1Q9NZU7 370 aa15.01□□□□□ -0.01
DDR1-227ENST00000376570 IPO9Q96P70 1041 aaKnown RBP15.01□□□□□ -0.01
DDR1-227ENST00000376570 SLC26A8Q96RN1 970 aa15.01□□□□□ -0.01
DDR1-227ENST00000376570 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
DDR1-227ENST00000376570 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
DDR1-227ENST00000376570 VGFO15240 615 aaPredicted RBP15□□□□□ -0.01
DDR1-227ENST00000376570 HDGFL2Q7Z4V5 671 aaPredicted RBP15□□□□□ -0.01
DDR1-227ENST00000376570 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
DDR1-227ENST00000376570 TEX14Q8IWB6 1497 aa15□□□□□ -0.01
DDR1-227ENST00000376570 IL27Q8NEV9 243 aa14.99□□□□□ -0.01
DDR1-227ENST00000376570 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
DDR1-227ENST00000376570 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
DDR1-227ENST00000376570 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
DDR1-227ENST00000376570 PMFBP1Q8TBY8 1022 aa14.98□□□□□ -0.01
DDR1-227ENST00000376570 CARD14Q9BXL6 1004 aa14.97□□□□□ -0.01
DDR1-227ENST00000376570 PER1O15534 1290 aaPredicted RBP14.97□□□□□ -0.01
DDR1-227ENST00000376570 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
DDR1-227ENST00000376570 MFAP1P55081 439 aaKnown RBP14.97□□□□□ -0.01
DDR1-227ENST00000376570 RIPK4P57078 832 aa14.97□□□□□ -0.01
DDR1-227ENST00000376570 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
DDR1-227ENST00000376570 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
DDR1-227ENST00000376570 CGNL1Q0VF96 1302 aa14.96□□□□□ -0.01
DDR1-227ENST00000376570 LRRIQ1Q96JM4 1722 aa14.96□□□□□ -0.01
DDR1-227ENST00000376570 PDE3BQ13370 1112 aa14.96□□□□□ -0.02
DDR1-227ENST00000376570 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
DDR1-227ENST00000376570 SLC4A10Q6U841 1118 aa14.94□□□□□ -0.02
DDR1-227ENST00000376570 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
DDR1-227ENST00000376570 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
DDR1-227ENST00000376570 NUP160Q12769 1436 aa14.94□□□□□ -0.02
DDR1-227ENST00000376570 ADGRL1O94910 1474 aa14.94□□□□□ -0.02
DDR1-227ENST00000376570 TERF2IPQ9NYB0 399 aa14.94□□□□□ -0.02
DDR1-227ENST00000376570 FAM135AQ9P2D6 1515 aa14.93□□□□□ -0.02
DDR1-227ENST00000376570 NOS1P29475 1434 aa14.93□□□□□ -0.02
DDR1-227ENST00000376570 ERICH6BQ5W0A0 696 aa14.93□□□□□ -0.02
DDR1-227ENST00000376570 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
DDR1-227ENST00000376570 FANCAO15360 1455 aa14.93□□□□□ -0.02
DDR1-227ENST00000376570 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
DDR1-227ENST00000376570 SMG6Q86US8 1419 aaKnown RBP14.92□□□□□ -0.02
DDR1-227ENST00000376570 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
DDR1-227ENST00000376570 NGDNQ8NEJ9 315 aaKnown RBP14.91□□□□□ -0.02
DDR1-227ENST00000376570 CDK19Q9BWU1 502 aa14.91□□□□□ -0.02
DDR1-227ENST00000376570 DNMT1P26358 1616 aaKnown RBP14.91□□□□□ -0.02
DDR1-227ENST00000376570 CD109Q6YHK3 1445 aa14.91□□□□□ -0.02
DDR1-227ENST00000376570 NSD3Q9BZ95 1437 aa14.91□□□□□ -0.02
DDR1-227ENST00000376570 TAOK2Q9UL54 1235 aa14.91□□□□□ -0.02
DDR1-227ENST00000376570 E9PSI1 815 aa14.9□□□□□ -0.02
DDR1-227ENST00000376570 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
DDR1-227ENST00000376570 MIS18AQ9NYP9 233 aa14.89□□□□□ -0.03
DDR1-227ENST00000376570 SPATA31E1Q6ZUB1 1445 aa14.89□□□□□ -0.03
DDR1-227ENST00000376570 DUSP27Q5VZP5 1158 aa14.88□□□□□ -0.03
DDR1-227ENST00000376570 RUNDC1Q96C34 613 aa14.88□□□□□ -0.03
DDR1-227ENST00000376570 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
DDR1-227ENST00000376570 LNPKQ9C0E8 428 aa14.88□□□□□ -0.03
DDR1-227ENST00000376570 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
DDR1-227ENST00000376570 A2MP01023 1474 aa14.88□□□□□ -0.03
DDR1-227ENST00000376570 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
DDR1-227ENST00000376570 XPCQ01831 940 aaPredicted RBP14.87□□□□□ -0.03
DDR1-227ENST00000376570 MYH16Q9H6N6 1097 aa14.87□□□□□ -0.03
DDR1-227ENST00000376570 EMILIN1Q9Y6C2 1016 aa14.87□□□□□ -0.03
DDR1-227ENST00000376570 PLCH2O75038 1416 aa14.86□□□□□ -0.03
DDR1-227ENST00000376570 ASXL2Q76L83 1435 aa14.86□□□□□ -0.03
DDR1-227ENST00000376570 NOL8Q76FK4 1167 aaKnown RBP14.86□□□□□ -0.03
DDR1-227ENST00000376570 NME9Q86XW9 330 aa14.86□□□□□ -0.03
DDR1-227ENST00000376570 MBD5Q9P267 1494 aa14.85□□□□□ -0.03
DDR1-227ENST00000376570 SLFN5Q08AF3 891 aa14.85□□□□□ -0.03
DDR1-227ENST00000376570 UGGT1Q9NYU2 1555 aa14.85□□□□□ -0.03
DDR1-227ENST00000376570 IGHDP01880 384 aa14.84□□□□□ -0.03
DDR1-227ENST00000376570 RALGAPBQ86X10 1494 aa14.83□□□□□ -0.04
DDR1-227ENST00000376570 FAM83GA6ND36 823 aa14.83□□□□□ -0.04
DDR1-227ENST00000376570 AMPHP49418 695 aa14.83□□□□□ -0.04
DDR1-227ENST00000376570 ANKRD45Q5TZF3 282 aa14.83□□□□□ -0.04
DDR1-227ENST00000376570 FOXD4L5Q5VV16 416 aaPredicted RBP14.82□□□□□ -0.04
DDR1-227ENST00000376570 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
DDR1-227ENST00000376570 FOXD4L4Q8WXT5 416 aaPredicted RBP14.82□□□□□ -0.04
DDR1-227ENST00000376570 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
DDR1-227ENST00000376570 COG3Q96JB2 828 aa14.82□□□□□ -0.04
DDR1-227ENST00000376570 ABCC10Q5T3U5 1492 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms