RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 ZNF326Q5BKZ1 582 aaKnown RBP15.58■□□□□ 0.08
PDPN-202ENST00000376057 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
PDPN-202ENST00000376057 SCAF11Q99590 1463 aaKnown RBP15.57■□□□□ 0.08
PDPN-202ENST00000376057 MYO3AQ8NEV4 1616 aa15.57■□□□□ 0.08
PDPN-202ENST00000376057 IDI1Q13907 227 aa15.56■□□□□ 0.08
PDPN-202ENST00000376057 MIER1Q8N108 512 aa15.55■□□□□ 0.08
PDPN-202ENST00000376057 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
PDPN-202ENST00000376057 MYO5BQ9ULV0 1848 aa15.55■□□□□ 0.08
PDPN-202ENST00000376057 NBPF1Q3BBV0 1214 aa15.54■□□□□ 0.08
PDPN-202ENST00000376057 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
PDPN-202ENST00000376057 KIF7Q2M1P5 1343 aa15.53■□□□□ 0.08
PDPN-202ENST00000376057 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
PDPN-202ENST00000376057 DDX10Q13206 875 aaKnown RBP15.53■□□□□ 0.08
PDPN-202ENST00000376057 FER1L4A9Z1Z3 1794 aa15.53■□□□□ 0.08
PDPN-202ENST00000376057 ADGRB1O14514 1584 aa15.53■□□□□ 0.08
PDPN-202ENST00000376057 C11orf95C9JLR9 678 aaPredicted RBP15.53■□□□□ 0.08
PDPN-202ENST00000376057 ADGRF5Q8IZF2 1346 aa15.52■□□□□ 0.08
PDPN-202ENST00000376057 C14orf93Q9H972 538 aaKnown RBP15.52■□□□□ 0.08
PDPN-202ENST00000376057 A2ML1A8K2U0 1454 aa15.52■□□□□ 0.07
PDPN-202ENST00000376057 EIF3AQ14152 1382 aaKnown RBP15.52■□□□□ 0.07
PDPN-202ENST00000376057 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
PDPN-202ENST00000376057 NLRP1Q9C000 1473 aa15.51■□□□□ 0.07
PDPN-202ENST00000376057 C3P01024 1663 aa15.5■□□□□ 0.07
PDPN-202ENST00000376057 ST20-MTHFSA0A0A6YYL1 179 aa15.5■□□□□ 0.07
PDPN-202ENST00000376057 FBXO31Q5XUX0 539 aaPredicted RBP15.5■□□□□ 0.07
PDPN-202ENST00000376057 TESK2Q96S53 571 aa15.49■□□□□ 0.07
PDPN-202ENST00000376057 SBNO2Q9Y2G9 1366 aa15.49■□□□□ 0.07
PDPN-202ENST00000376057 TNRQ92752 1358 aa15.48■□□□□ 0.07
PDPN-202ENST00000376057 UBR1Q8IWV7 1749 aa15.48■□□□□ 0.07
PDPN-202ENST00000376057 CCER2I3L3R5 266 aa15.47■□□□□ 0.07
PDPN-202ENST00000376057 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
PDPN-202ENST00000376057 MLECQ14165 292 aa15.45■□□□□ 0.06
PDPN-202ENST00000376057 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
PDPN-202ENST00000376057 CFAP70Q5T0N1 1121 aa15.44■□□□□ 0.06
PDPN-202ENST00000376057 SETD1AO15047 1707 aaKnown RBP15.44■□□□□ 0.06
PDPN-202ENST00000376057 ANP32CO43423 234 aa15.43■□□□□ 0.06
PDPN-202ENST00000376057 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDPN-202ENST00000376057 TMF1P82094 1093 aa15.43■□□□□ 0.06
PDPN-202ENST00000376057 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
PDPN-202ENST00000376057 ARHGEF28Q8N1W1 1705 aaKnown RBP15.42■□□□□ 0.06
PDPN-202ENST00000376057 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
PDPN-202ENST00000376057 CDCA8Q53HL2 280 aa15.42■□□□□ 0.06
PDPN-202ENST00000376057 HDGFP51858 240 aaKnown RBP15.41■□□□□ 0.06
PDPN-202ENST00000376057 SLIT1O75093 1534 aa15.41■□□□□ 0.06
PDPN-202ENST00000376057 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
PDPN-202ENST00000376057 KTN1Q86UP2 1357 aaKnown RBP15.41■□□□□ 0.06
PDPN-202ENST00000376057 PUS7Q96PZ0 661 aaKnown RBP15.4■□□□□ 0.06
PDPN-202ENST00000376057 DLC1Q96QB1 1528 aa15.4■□□□□ 0.06
PDPN-202ENST00000376057 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
PDPN-202ENST00000376057 DISP3Q9P2K9 1392 aa15.39■□□□□ 0.05
PDPN-202ENST00000376057 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
PDPN-202ENST00000376057 QRICH2Q9H0J4 1663 aa15.39■□□□□ 0.05
PDPN-202ENST00000376057 TMEM2Q9UHN6 1383 aa15.38■□□□□ 0.05
PDPN-202ENST00000376057 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
PDPN-202ENST00000376057 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
PDPN-202ENST00000376057 KNDC1Q76NI1 1749 aa15.37■□□□□ 0.05
PDPN-202ENST00000376057 MYOM1P52179 1685 aa15.36■□□□□ 0.05
PDPN-202ENST00000376057 RIMS1Q86UR5 1692 aaKnown RBP15.36■□□□□ 0.05
PDPN-202ENST00000376057 CENPJQ9HC77 1338 aaPredicted RBP15.34■□□□□ 0.05
PDPN-202ENST00000376057 PTPRMP28827 1452 aa15.34■□□□□ 0.05
PDPN-202ENST00000376057 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
PDPN-202ENST00000376057 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
PDPN-202ENST00000376057 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
PDPN-202ENST00000376057 SIRT1Q96EB6 747 aa15.33■□□□□ 0.04
PDPN-202ENST00000376057 DIP2AQ14689 1571 aa15.32■□□□□ 0.04
PDPN-202ENST00000376057 MED14O60244 1454 aa15.32■□□□□ 0.04
PDPN-202ENST00000376057 LRPPRCP42704 1394 aaKnown RBP15.32■□□□□ 0.04
PDPN-202ENST00000376057 TECPR2O15040 1411 aa15.32■□□□□ 0.04
PDPN-202ENST00000376057 ABCC11Q96J66 1382 aa15.31■□□□□ 0.04
PDPN-202ENST00000376057 CEP170BQ9Y4F5 1589 aaPredicted RBP15.31■□□□□ 0.04
PDPN-202ENST00000376057 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
PDPN-202ENST00000376057 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
PDPN-202ENST00000376057 CPS1P31327 1500 aa15.29■□□□□ 0.04
PDPN-202ENST00000376057 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
PDPN-202ENST00000376057 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
PDPN-202ENST00000376057 THEMISQ8N1K5 641 aaPredicted RBP15.28■□□□□ 0.04
PDPN-202ENST00000376057 RALBP1Q15311 655 aa15.27■□□□□ 0.04
PDPN-202ENST00000376057 TMEM132EQ6IEE7 984 aa15.27■□□□□ 0.04
PDPN-202ENST00000376057 ADAMTS13Q76LX8 1427 aa15.27■□□□□ 0.03
PDPN-202ENST00000376057 TULP4Q9NRJ4 1543 aa15.27■□□□□ 0.03
PDPN-202ENST00000376057 NINLQ9Y2I6 1382 aa15.27■□□□□ 0.03
PDPN-202ENST00000376057 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
PDPN-202ENST00000376057 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
PDPN-202ENST00000376057 NUTM2DQ5VT03 806 aaPredicted RBP15.26■□□□□ 0.03
PDPN-202ENST00000376057 USP32Q8NFA0 1604 aa15.26■□□□□ 0.03
PDPN-202ENST00000376057 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
PDPN-202ENST00000376057 CENPBP07199 599 aaPredicted RBP15.25■□□□□ 0.03
PDPN-202ENST00000376057 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
PDPN-202ENST00000376057 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
PDPN-202ENST00000376057 PANK3Q9H999 370 aa15.22■□□□□ 0.03
PDPN-202ENST00000376057 ADGRB2O60241 1585 aa15.22■□□□□ 0.03
PDPN-202ENST00000376057 METP08581 1390 aa15.21■□□□□ 0.03
PDPN-202ENST00000376057 PIK3R4Q99570 1358 aa15.21■□□□□ 0.03
PDPN-202ENST00000376057 LTKP29376 864 aa15.21■□□□□ 0.02
PDPN-202ENST00000376057 POLR3GLQ9BT43 218 aa15.21■□□□□ 0.02
PDPN-202ENST00000376057 TBX22Q9Y458 520 aa15.21■□□□□ 0.02
PDPN-202ENST00000376057 BRD4O60885 1362 aaPredicted RBP15.2■□□□□ 0.02
PDPN-202ENST00000376057 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
PDPN-202ENST00000376057 MYBBP1AQ9BQG0 1328 aaKnown RBP15.19■□□□□ 0.02
PDPN-202ENST00000376057 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms