RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
SPIN1-201ENST00000375859 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
SPIN1-201ENST00000375859 NLRP13Q86W25 1043 aa16.84■□□□□ 0.29
SPIN1-201ENST00000375859 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
SPIN1-201ENST00000375859 CEP152O94986 1710 aa16.82■□□□□ 0.28
SPIN1-201ENST00000375859 EIF2AK4Q9P2K8 1649 aaKnown RBP16.82■□□□□ 0.28
SPIN1-201ENST00000375859 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
SPIN1-201ENST00000375859 EFCAB6Q5THR3 1501 aa16.82■□□□□ 0.28
SPIN1-201ENST00000375859 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
SPIN1-201ENST00000375859 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
SPIN1-201ENST00000375859 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
SPIN1-201ENST00000375859 PPRC1Q5VV67 1664 aaKnown RBP16.8■□□□□ 0.28
SPIN1-201ENST00000375859 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
SPIN1-201ENST00000375859 MROH1Q8NDA8 1641 aa16.8■□□□□ 0.28
SPIN1-201ENST00000375859 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
SPIN1-201ENST00000375859 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
SPIN1-201ENST00000375859 FRMPD1Q5SYB0 1578 aa16.79■□□□□ 0.28
SPIN1-201ENST00000375859 POGKQ9P215 609 aa16.79■□□□□ 0.28
SPIN1-201ENST00000375859 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
SPIN1-201ENST00000375859 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
SPIN1-201ENST00000375859 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.27
SPIN1-201ENST00000375859 ABCC3O15438 1527 aa16.77■□□□□ 0.27
SPIN1-201ENST00000375859 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
SPIN1-201ENST00000375859 RNF17Q9BXT8 1623 aaKnown RBP16.76■□□□□ 0.27
SPIN1-201ENST00000375859 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
SPIN1-201ENST00000375859 SLC12A5Q9H2X9 1139 aa16.76■□□□□ 0.27
SPIN1-201ENST00000375859 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
SPIN1-201ENST00000375859 MADDQ8WXG6 1647 aa16.75■□□□□ 0.27
SPIN1-201ENST00000375859 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
SPIN1-201ENST00000375859 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
SPIN1-201ENST00000375859 CABP2Q9NPB3 220 aa16.74■□□□□ 0.27
SPIN1-201ENST00000375859 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
SPIN1-201ENST00000375859 POLR1AO95602 1720 aaPredicted RBP16.73■□□□□ 0.27
SPIN1-201ENST00000375859 KIF1BO60333 1816 aa16.72■□□□□ 0.27
SPIN1-201ENST00000375859 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
SPIN1-201ENST00000375859 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
SPIN1-201ENST00000375859 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
SPIN1-201ENST00000375859 DIP2BQ9P265 1576 aa16.7■□□□□ 0.26
SPIN1-201ENST00000375859 PARD3Q8TEW0 1356 aa16.69■□□□□ 0.26
SPIN1-201ENST00000375859 LMTK2Q8IWU2 1503 aa16.69■□□□□ 0.26
SPIN1-201ENST00000375859 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
SPIN1-201ENST00000375859 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
SPIN1-201ENST00000375859 PRAM1Q96QH2 718 aa16.68■□□□□ 0.26
SPIN1-201ENST00000375859 ADAMTS8Q9UP79 889 aa16.68■□□□□ 0.26
SPIN1-201ENST00000375859 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
SPIN1-201ENST00000375859 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
SPIN1-201ENST00000375859 AMER1Q5JTC6 1135 aaPredicted RBP16.67■□□□□ 0.26
SPIN1-201ENST00000375859 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
SPIN1-201ENST00000375859 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
SPIN1-201ENST00000375859 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
SPIN1-201ENST00000375859 CARD14Q9BXL6 1004 aa16.66■□□□□ 0.26
SPIN1-201ENST00000375859 MYOM2P54296 1465 aa16.66■□□□□ 0.26
SPIN1-201ENST00000375859 GLI2P10070 1586 aa16.65■□□□□ 0.26
SPIN1-201ENST00000375859 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
SPIN1-201ENST00000375859 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
SPIN1-201ENST00000375859 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.25
SPIN1-201ENST00000375859 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
SPIN1-201ENST00000375859 ADGRB3O60242 1522 aa16.64■□□□□ 0.25
SPIN1-201ENST00000375859 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
SPIN1-201ENST00000375859 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
SPIN1-201ENST00000375859 LAMC1P11047 1609 aa16.61■□□□□ 0.25
SPIN1-201ENST00000375859 ERVK-7P63135 1459 aa16.6■□□□□ 0.25
SPIN1-201ENST00000375859 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
SPIN1-201ENST00000375859 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
SPIN1-201ENST00000375859 ZMYM3Q14202 1370 aa16.59■□□□□ 0.25
SPIN1-201ENST00000375859 SYNMO15061 1565 aa16.59■□□□□ 0.25
SPIN1-201ENST00000375859 TXNDC2Q86VQ3 553 aa16.59■□□□□ 0.25
SPIN1-201ENST00000375859 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
SPIN1-201ENST00000375859 ARHGAP31Q2M1Z3 1444 aa16.58■□□□□ 0.24
SPIN1-201ENST00000375859 IQGAP1P46940 1657 aa16.57■□□□□ 0.24
SPIN1-201ENST00000375859 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■■■□□ 17
SPIN1-201ENST00000375859 GGNBP2Q9H3C7 697 aa16.57■□□□□ 0.24
SPIN1-201ENST00000375859 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
SPIN1-201ENST00000375859 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
SPIN1-201ENST00000375859 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
SPIN1-201ENST00000375859 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
SPIN1-201ENST00000375859 PPP4R2Q9NY27 417 aa16.56■□□□□ 0.24
SPIN1-201ENST00000375859 APAF1O14727 1248 aa16.56■□□□□ 0.24
SPIN1-201ENST00000375859 CDK19Q9BWU1 502 aa16.56■□□□□ 0.24
SPIN1-201ENST00000375859 RCAN3Q9UKA8 241 aa16.55■□□□□ 0.24
SPIN1-201ENST00000375859 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
SPIN1-201ENST00000375859 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
SPIN1-201ENST00000375859 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
SPIN1-201ENST00000375859 CABP1Q9NZU7 370 aa16.54■□□□□ 0.24
SPIN1-201ENST00000375859 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
SPIN1-201ENST00000375859 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
SPIN1-201ENST00000375859 MTHFSP49914 203 aa16.53■□□□□ 0.24
SPIN1-201ENST00000375859 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
SPIN1-201ENST00000375859 PLIN1O60240 522 aa16.53■□□□□ 0.24
SPIN1-201ENST00000375859 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
SPIN1-201ENST00000375859 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
SPIN1-201ENST00000375859 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
SPIN1-201ENST00000375859 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
SPIN1-201ENST00000375859 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.24
SPIN1-201ENST00000375859 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.24
SPIN1-201ENST00000375859 CFAP53Q96M91 514 aa16.52■□□□□ 0.24
SPIN1-201ENST00000375859 TSHZ2Q9NRE2 1034 aa16.52■□□□□ 0.24
SPIN1-201ENST00000375859 ZMYM4Q5VZL5 1548 aa16.51■□□□□ 0.23
SPIN1-201ENST00000375859 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPIN1-201ENST00000375859 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms