RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 TET3O43151 1660 aa25.11■■□□□ 1.61
CLIC1-208ENST00000375784 KDM5AP29375 1690 aaKnown RBP25.1■■□□□ 1.61
CLIC1-208ENST00000375784 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
CLIC1-208ENST00000375784 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
CLIC1-208ENST00000375784 MSH6P52701 1360 aa25.05■■□□□ 1.6
CLIC1-208ENST00000375784 SLAIN2Q9P270 581 aa25.04■■□□□ 1.6
CLIC1-208ENST00000375784 NWD1Q149M9 1564 aa25.03■■□□□ 1.6
CLIC1-208ENST00000375784 NOS1P29475 1434 aa25.03■■□□□ 1.6
CLIC1-208ENST00000375784 BCANQ96GW7 911 aa25.01■■□□□ 1.59
CLIC1-208ENST00000375784 JCADQ9P266 1359 aa25.01■■□□□ 1.59
CLIC1-208ENST00000375784 SLC52A1Q9NWF4 448 aa25■■□□□ 1.59
CLIC1-208ENST00000375784 ADGRB3O60242 1522 aa25■■□□□ 1.59
CLIC1-208ENST00000375784 NUP155O75694 1391 aa24.98■■□□□ 1.59
CLIC1-208ENST00000375784 PHLPP1O60346 1717 aa24.96■■□□□ 1.59
CLIC1-208ENST00000375784 UNC13BO14795 1591 aa24.95■■□□□ 1.58
CLIC1-208ENST00000375784 NAIPQ13075 1403 aa24.95■■□□□ 1.58
CLIC1-208ENST00000375784 RPRD2Q5VT52 1461 aaKnown RBP24.94■■□□□ 1.58
CLIC1-208ENST00000375784 SETD1AO15047 1707 aaKnown RBP24.93■■□□□ 1.58
CLIC1-208ENST00000375784 HFM1A2PYH4 1435 aa24.93■■□□□ 1.58
CLIC1-208ENST00000375784 PLEKHG1Q9ULL1 1385 aa24.93■■□□□ 1.58
CLIC1-208ENST00000375784 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
CLIC1-208ENST00000375784 HDGFP51858 240 aaKnown RBP24.9■■□□□ 1.58
CLIC1-208ENST00000375784 SPATA31A6Q5VVP1 1343 aa24.89■■□□□ 1.58
CLIC1-208ENST00000375784 NCOA3Q9Y6Q9 1424 aa24.89■■□□□ 1.58
CLIC1-208ENST00000375784 PPP1R15AO75807 674 aaPredicted RBP24.89■■□□□ 1.58
CLIC1-208ENST00000375784 COL16A1Q07092 1604 aaPredicted RBP24.88■■□□□ 1.57
CLIC1-208ENST00000375784 TBX22Q9Y458 520 aa24.88■■□□□ 1.57
CLIC1-208ENST00000375784 RIMS2Q9UQ26 1411 aa24.87■■□□□ 1.57
CLIC1-208ENST00000375784 LRP6O75581 1613 aa24.87■■□□□ 1.57
CLIC1-208ENST00000375784 TRIM52Q96A61 297 aa24.87■■□□□ 1.57
CLIC1-208ENST00000375784 CHD2O14647 1828 aaKnown RBP24.86■■□□□ 1.57
CLIC1-208ENST00000375784 ZNF772Q68DY9 489 aaPredicted RBP24.86■■□□□ 1.57
CLIC1-208ENST00000375784 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
CLIC1-208ENST00000375784 MEX3CQ5U5Q3 659 aaKnown RBP24.85■■□□□ 1.57
CLIC1-208ENST00000375784 UPF1Q92900 1129 aaKnown RBP eCLIP24.85■■□□□ 1.571e-12■□□□□ 10.4
CLIC1-208ENST00000375784 C14orf37Q86TY3 774 aa24.84■■□□□ 1.57
CLIC1-208ENST00000375784 GCC2Q8IWJ2 1684 aa24.83■■□□□ 1.57
CLIC1-208ENST00000375784 CADPS2Q86UW7 1296 aa24.82■■□□□ 1.56
CLIC1-208ENST00000375784 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.81■■□□□ 1.56
CLIC1-208ENST00000375784 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
CLIC1-208ENST00000375784 TMEM131LA2VDJ0 1609 aa24.79■■□□□ 1.56
CLIC1-208ENST00000375784 ATF3P18847 181 aa24.79■■□□□ 1.56
CLIC1-208ENST00000375784 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
CLIC1-208ENST00000375784 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
CLIC1-208ENST00000375784 E9PCH4 1651 aa24.77■■□□□ 1.56
CLIC1-208ENST00000375784 ACIN1Q9UKV3 1341 aaKnown RBP24.77■■□□□ 1.56
CLIC1-208ENST00000375784 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
CLIC1-208ENST00000375784 CHGAP10645 457 aaKnown RBP24.76■■□□□ 1.55
CLIC1-208ENST00000375784 RXRBP28702 533 aa24.76■■□□□ 1.55
CLIC1-208ENST00000375784 PIK3R4Q99570 1358 aa24.76■■□□□ 1.55
CLIC1-208ENST00000375784 NUTM2DQ5VT03 806 aaPredicted RBP24.75■■□□□ 1.55
CLIC1-208ENST00000375784 SLC4A1APQ9BWU0 796 aaKnown RBP24.75■■□□□ 1.55
CLIC1-208ENST00000375784 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.75■■□□□ 1.55
CLIC1-208ENST00000375784 SHPRHQ149N8 1683 aa24.74■■□□□ 1.55
CLIC1-208ENST00000375784 BRINP3Q76B58 766 aa24.73■■□□□ 1.55
CLIC1-208ENST00000375784 DIP2AQ14689 1571 aa24.72■■□□□ 1.55
CLIC1-208ENST00000375784 NUTM2BA6NNL0 878 aaPredicted RBP24.7■■□□□ 1.54
CLIC1-208ENST00000375784 NUTM2EB1AL46 878 aaPredicted RBP24.7■■□□□ 1.54
CLIC1-208ENST00000375784 NUTM2AQ8IVF1 878 aaPredicted RBP24.7■■□□□ 1.54
CLIC1-208ENST00000375784 AMOTL2Q9Y2J4 779 aa24.7■■□□□ 1.54
CLIC1-208ENST00000375784 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
CLIC1-208ENST00000375784 CDK12Q9NYV4 1490 aaPredicted RBP24.69■■□□□ 1.54
CLIC1-208ENST00000375784 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
CLIC1-208ENST00000375784 TRPM2O94759 1503 aa24.66■■□□□ 1.54
CLIC1-208ENST00000375784 AFF2P51816 1311 aa24.65■■□□□ 1.54
CLIC1-208ENST00000375784 DCCP43146 1447 aa24.64■■□□□ 1.54
CLIC1-208ENST00000375784 MPHOSPH9Q99550 1183 aa24.64■■□□□ 1.54
CLIC1-208ENST00000375784 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
CLIC1-208ENST00000375784 SPHKAPQ2M3C7 1700 aa24.6■■□□□ 1.53
CLIC1-208ENST00000375784 RAB3GAP2Q9H2M9 1393 aa24.59■■□□□ 1.53
CLIC1-208ENST00000375784 ZNF326Q5BKZ1 582 aaKnown RBP24.59■■□□□ 1.53
CLIC1-208ENST00000375784 LRRC59Q96AG4 307 aaKnown RBP24.59■■□□□ 1.53
CLIC1-208ENST00000375784 MST1RQ04912 1400 aa24.59■■□□□ 1.53
CLIC1-208ENST00000375784 C8orf37Q96NL8 207 aa24.56■■□□□ 1.52
CLIC1-208ENST00000375784 QTRT2Q9H974 415 aaKnown RBP24.56■■□□□ 1.52
CLIC1-208ENST00000375784 HRCP23327 699 aa24.55■■□□□ 1.52
CLIC1-208ENST00000375784 RBM6P78332 1123 aaKnown RBP24.55■■□□□ 1.52
CLIC1-208ENST00000375784 RGS12O14924 1447 aa24.54■■□□□ 1.52
CLIC1-208ENST00000375784 XRN1Q8IZH2 1706 aaKnown RBP24.53■■□□□ 1.52
CLIC1-208ENST00000375784 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
CLIC1-208ENST00000375784 PNPLA6Q8IY17 1366 aa24.53■■□□□ 1.52
CLIC1-208ENST00000375784 DDX17Q92841 729 aaKnown RBP24.52■■□□□ 1.52
CLIC1-208ENST00000375784 SETBP1Q9Y6X0 1596 aa24.51■■□□□ 1.51
CLIC1-208ENST00000375784 NRXN3Q9Y4C0 1643 aa24.51■■□□□ 1.51
CLIC1-208ENST00000375784 METP08581 1390 aa24.51■■□□□ 1.51
CLIC1-208ENST00000375784 CLTCL1P53675 1640 aa24.5■■□□□ 1.51
CLIC1-208ENST00000375784 ADGRL3Q9HAR2 1447 aa24.48■■□□□ 1.51
CLIC1-208ENST00000375784 CCDC144AA2RUR9 1427 aa24.47■■□□□ 1.51
CLIC1-208ENST00000375784 NGLY1Q96IV0 654 aa24.46■■□□□ 1.51
CLIC1-208ENST00000375784 RPGRIP1LQ68CZ1 1315 aa24.45■■□□□ 1.5
CLIC1-208ENST00000375784 ADRA2BP18089 450 aa24.45■■□□□ 1.5
CLIC1-208ENST00000375784 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
CLIC1-208ENST00000375784 ADAMTS2O95450 1211 aa24.44■■□□□ 1.5
CLIC1-208ENST00000375784 KIF1BO60333 1816 aa24.42■■□□□ 1.5
CLIC1-208ENST00000375784 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
CLIC1-208ENST00000375784 ATAD2Q6PL18 1390 aa24.4■■□□□ 1.5
CLIC1-208ENST00000375784 RGL3Q3MIN7 710 aa24.38■■□□□ 1.49
CLIC1-208ENST00000375784 USP21Q9UK80 565 aa24.38■■□□□ 1.49
CLIC1-208ENST00000375784 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
CLIC1-208ENST00000375784 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms