RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 FGD1P98174 961 aa20.93■□□□□ 0.94
VARS-215ENST00000375663 HMMRO75330 724 aa20.93■□□□□ 0.94
VARS-215ENST00000375663 TCP11L2Q8N4U5 519 aa20.92■□□□□ 0.94
VARS-215ENST00000375663 CHAF1AQ13111 956 aaPredicted RBP20.92■□□□□ 0.94
VARS-215ENST00000375663 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
VARS-215ENST00000375663 LMOD3Q0VAK6 560 aa20.92■□□□□ 0.94
VARS-215ENST00000375663 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
VARS-215ENST00000375663 ST18O60284 1047 aa20.91■□□□□ 0.94
VARS-215ENST00000375663 SKOR2Q2VWA4 1001 aaPredicted RBP20.91■□□□□ 0.94
VARS-215ENST00000375663 KIAA1211Q6ZU35 1233 aa20.91■□□□□ 0.94
VARS-215ENST00000375663 SKAP1Q86WV1 359 aa20.91■□□□□ 0.94
VARS-215ENST00000375663 SLC4A10Q6U841 1118 aa20.9■□□□□ 0.94
VARS-215ENST00000375663 SYAP1Q96A49 352 aaPredicted RBP20.9■□□□□ 0.94
VARS-215ENST00000375663 PTPRKQ15262 1439 aa20.9■□□□□ 0.94
VARS-215ENST00000375663 KIAA2012Q0VF49 1180 aa20.9■□□□□ 0.94
VARS-215ENST00000375663 HSP90AA2PQ14568 343 aaPredicted RBP20.9■□□□□ 0.94
VARS-215ENST00000375663 LMOD2Q6P5Q4 547 aa20.9■□□□□ 0.94
VARS-215ENST00000375663 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
VARS-215ENST00000375663 VGFO15240 615 aaPredicted RBP20.9■□□□□ 0.94
VARS-215ENST00000375663 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.94
VARS-215ENST00000375663 CFAP70Q5T0N1 1121 aa20.89■□□□□ 0.94
VARS-215ENST00000375663 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.93
VARS-215ENST00000375663 RIPK4P57078 832 aa20.89■□□□□ 0.93
VARS-215ENST00000375663 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.93
VARS-215ENST00000375663 TRIM6-TRIM34B2RNG4 842 aa20.88■□□□□ 0.93
VARS-215ENST00000375663 MTHFSP49914 203 aa20.88■□□□□ 0.93
VARS-215ENST00000375663 STK31Q9BXU1 1019 aa20.88■□□□□ 0.93
VARS-215ENST00000375663 NOL8Q76FK4 1167 aaKnown RBP20.88■□□□□ 0.93
VARS-215ENST00000375663 ARID3AQ99856 593 aa20.88■□□□□ 0.93
VARS-215ENST00000375663 ABCC5O15440 1437 aa20.87■□□□□ 0.93
VARS-215ENST00000375663 FOXD4L5Q5VV16 416 aaPredicted RBP20.87■□□□□ 0.93
VARS-215ENST00000375663 FOXD4L4Q8WXT5 416 aaPredicted RBP20.87■□□□□ 0.93
VARS-215ENST00000375663 PDZRN3Q9UPQ7 1066 aa20.87■□□□□ 0.93
VARS-215ENST00000375663 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
VARS-215ENST00000375663 C20orf194Q5TEA3 1177 aa20.85■□□□□ 0.93
VARS-215ENST00000375663 MINK1Q8N4C8 1332 aaPredicted RBP20.85■□□□□ 0.93
VARS-215ENST00000375663 ERBINQ96RT1 1412 aa20.85■□□□□ 0.93
VARS-215ENST00000375663 KIF16BQ96L93 1317 aa20.83■□□□□ 0.93
VARS-215ENST00000375663 DRC7Q8IY82 874 aa20.83■□□□□ 0.92
VARS-215ENST00000375663 NAP1L2Q9ULW6 460 aaPredicted RBP20.83■□□□□ 0.92
VARS-215ENST00000375663 AFAP1Q8N556 730 aa20.82■□□□□ 0.92
VARS-215ENST00000375663 TMEM132EQ6IEE7 984 aa20.8■□□□□ 0.92
VARS-215ENST00000375663 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
VARS-215ENST00000375663 TRAK2O60296 914 aa20.8■□□□□ 0.92
VARS-215ENST00000375663 GGNBP2Q9H3C7 697 aa20.8■□□□□ 0.92
VARS-215ENST00000375663 TAOK2Q9UL54 1235 aa20.79■□□□□ 0.92
VARS-215ENST00000375663 MRE11P49959 708 aa20.78■□□□□ 0.92
VARS-215ENST00000375663 GOLGA6L6A8MZA4 724 aa20.78■□□□□ 0.92
VARS-215ENST00000375663 CUL7Q14999 1698 aa20.77■□□□□ 0.92
VARS-215ENST00000375663 API5Q9BZZ5 524 aaKnown RBP20.77■□□□□ 0.91
VARS-215ENST00000375663 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.91
VARS-215ENST00000375663 SYNJ2O15056 1496 aa20.76■□□□□ 0.91
VARS-215ENST00000375663 ARHGAP5Q13017 1502 aa20.76■□□□□ 0.91
VARS-215ENST00000375663 NRDCO43847 1150 aa20.76■□□□□ 0.91
VARS-215ENST00000375663 EXOSC9Q06265 439 aaKnown RBP20.76■□□□□ 0.91
VARS-215ENST00000375663 FOXD4L6Q3SYB3 417 aaPredicted RBP20.74■□□□□ 0.91
VARS-215ENST00000375663 FOXD4L3Q6VB84 417 aaPredicted RBP20.74■□□□□ 0.91
VARS-215ENST00000375663 REC8O95072 547 aa20.74■□□□□ 0.91
VARS-215ENST00000375663 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
VARS-215ENST00000375663 RILPL2Q969X0 211 aa20.74■□□□□ 0.91
VARS-215ENST00000375663 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
VARS-215ENST00000375663 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
VARS-215ENST00000375663 NUTM2FA1L443 756 aa20.73■□□□□ 0.91
VARS-215ENST00000375663 PHF14O94880 888 aa20.73■□□□□ 0.91
VARS-215ENST00000375663 TRHP20396 242 aaPredicted RBP20.73■□□□□ 0.91
VARS-215ENST00000375663 IQGAP2Q13576 1575 aa20.73■□□□□ 0.91
VARS-215ENST00000375663 TSR2Q969E8 191 aaKnown RBP20.72■□□□□ 0.91
VARS-215ENST00000375663 COG3Q96JB2 828 aa20.72■□□□□ 0.91
VARS-215ENST00000375663 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
VARS-215ENST00000375663 CAMSAP2Q08AD1 1489 aa20.72■□□□□ 0.91
VARS-215ENST00000375663 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
VARS-215ENST00000375663 NINLQ9Y2I6 1382 aa20.71■□□□□ 0.91
VARS-215ENST00000375663 HMOX1P09601 288 aa20.7■□□□□ 0.9
VARS-215ENST00000375663 NUCB2P80303 420 aa20.7■□□□□ 0.9
VARS-215ENST00000375663 GNAI1P63096 354 aa20.7■□□□□ 0.9
VARS-215ENST00000375663 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
VARS-215ENST00000375663 WDR63Q8IWG1 891 aa20.69■□□□□ 0.9
VARS-215ENST00000375663 SCAPERQ9BY12 1400 aa20.69■□□□□ 0.9
VARS-215ENST00000375663 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
VARS-215ENST00000375663 AMPHP49418 695 aa20.67■□□□□ 0.9
VARS-215ENST00000375663 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
VARS-215ENST00000375663 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
VARS-215ENST00000375663 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
VARS-215ENST00000375663 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
VARS-215ENST00000375663 CSPP1Q1MSJ5 1256 aa20.66■□□□□ 0.9
VARS-215ENST00000375663 CDC45O75419 566 aa20.66■□□□□ 0.9
VARS-215ENST00000375663 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
VARS-215ENST00000375663 MCM4P33991 863 aa20.65■□□□□ 0.9
VARS-215ENST00000375663 NOB1Q9ULX3 412 aaKnown RBP20.65■□□□□ 0.9
VARS-215ENST00000375663 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
VARS-215ENST00000375663 NASPP49321 788 aaPredicted RBP20.64■□□□□ 0.89
VARS-215ENST00000375663 NGDNQ8NEJ9 315 aaKnown RBP20.64■□□□□ 0.89
VARS-215ENST00000375663 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.89
VARS-215ENST00000375663 ATF7IPQ6VMQ6 1270 aa20.64■□□□□ 0.89
VARS-215ENST00000375663 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
VARS-215ENST00000375663 GPATCH3Q96I76 525 aa20.63■□□□□ 0.89
VARS-215ENST00000375663 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
VARS-215ENST00000375663 ARHGEF11O15085 1522 aa20.63■□□□□ 0.89
VARS-215ENST00000375663 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
VARS-215ENST00000375663 LTV1Q96GA3 475 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms