RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 HECW2Q9P2P5 1572 aa24.55■■□□□ 1.52
RXRB-202ENST00000374685 PARD3Q8TEW0 1356 aa24.55■■□□□ 1.52
RXRB-202ENST00000374685 FRMPD1Q5SYB0 1578 aa24.55■■□□□ 1.52
RXRB-202ENST00000374685 MLH3Q9UHC1 1453 aa24.54■■□□□ 1.52
RXRB-202ENST00000374685 YEATS2Q9ULM3 1422 aa24.54■■□□□ 1.52
RXRB-202ENST00000374685 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
RXRB-202ENST00000374685 B4GALNT3Q6L9W6 998 aa24.53■■□□□ 1.52
RXRB-202ENST00000374685 RNF17Q9BXT8 1623 aaKnown RBP24.52■■□□□ 1.52
RXRB-202ENST00000374685 LAMC1P11047 1609 aa24.52■■□□□ 1.52
RXRB-202ENST00000374685 NUDCQ9Y266 331 aa24.51■■□□□ 1.51
RXRB-202ENST00000374685 CFAP74Q9C0B2 1584 aa24.5■■□□□ 1.51
RXRB-202ENST00000374685 EIF3AQ14152 1382 aaKnown RBP24.5■■□□□ 1.51
RXRB-202ENST00000374685 SAFB2Q14151 953 aaKnown RBP eCLIP24.5■■□□□ 1.51
RXRB-202ENST00000374685 MLECQ14165 292 aa24.5■■□□□ 1.51
RXRB-202ENST00000374685 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
RXRB-202ENST00000374685 CDCA8Q53HL2 280 aa24.5■■□□□ 1.51
RXRB-202ENST00000374685 RBM19Q9Y4C8 960 aaKnown RBP24.5■■□□□ 1.51
RXRB-202ENST00000374685 ERICH6Q7L0X2 663 aa24.48■■□□□ 1.51
RXRB-202ENST00000374685 KIF1BO60333 1816 aa24.48■■□□□ 1.51
RXRB-202ENST00000374685 MROH2AA6NES4 1674 aa24.48■■□□□ 1.51
RXRB-202ENST00000374685 NEO1Q92859 1461 aa24.47■■□□□ 1.51
RXRB-202ENST00000374685 LRPPRCP42704 1394 aaKnown RBP24.45■■□□□ 1.51
RXRB-202ENST00000374685 IQGAP1P46940 1657 aa24.44■■□□□ 1.5
RXRB-202ENST00000374685 IDI1Q13907 227 aa24.44■■□□□ 1.5
RXRB-202ENST00000374685 STK26Q9P289 416 aa24.43■■□□□ 1.5
RXRB-202ENST00000374685 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
RXRB-202ENST00000374685 FBXO31Q5XUX0 539 aaPredicted RBP24.43■■□□□ 1.5
RXRB-202ENST00000374685 TSPOAP1O95153 1857 aa24.43■■□□□ 1.5
RXRB-202ENST00000374685 ABCC3O15438 1527 aa24.43■■□□□ 1.5
RXRB-202ENST00000374685 CDCA7LQ96GN5 454 aa24.43■■□□□ 1.5
RXRB-202ENST00000374685 TNNT2P45379 298 aaPredicted RBP24.42■■□□□ 1.5
RXRB-202ENST00000374685 SMG6Q86US8 1419 aaKnown RBP24.42■■□□□ 1.5
RXRB-202ENST00000374685 AMER1Q5JTC6 1135 aaPredicted RBP24.42■■□□□ 1.5
RXRB-202ENST00000374685 PPP2R1AP30153 589 aa24.41■■□□□ 1.5
RXRB-202ENST00000374685 PPP4R2Q9NY27 417 aa24.41■■□□□ 1.5
RXRB-202ENST00000374685 CENPJQ9HC77 1338 aaPredicted RBP24.41■■□□□ 1.5
RXRB-202ENST00000374685 ADAMTS8Q9UP79 889 aa24.4■■□□□ 1.5
RXRB-202ENST00000374685 LMTK2Q8IWU2 1503 aa24.4■■□□□ 1.5
RXRB-202ENST00000374685 DIP2CQ9Y2E4 1556 aa24.39■■□□□ 1.5
RXRB-202ENST00000374685 RIMBP3CA6NJZ7 1639 aa24.38■■□□□ 1.49
RXRB-202ENST00000374685 RIMBP3BA6NNM3 1639 aa24.38■■□□□ 1.49
RXRB-202ENST00000374685 RIMBP3Q9UFD9 1639 aa24.38■■□□□ 1.49
RXRB-202ENST00000374685 WDR43Q15061 677 aaKnown RBP eCLIP24.38■■□□□ 1.49
RXRB-202ENST00000374685 MYOM2P54296 1465 aa24.38■■□□□ 1.49
RXRB-202ENST00000374685 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
RXRB-202ENST00000374685 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
RXRB-202ENST00000374685 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
RXRB-202ENST00000374685 CARD14Q9BXL6 1004 aa24.35■■□□□ 1.49
RXRB-202ENST00000374685 ADGRB3O60242 1522 aa24.35■■□□□ 1.49
RXRB-202ENST00000374685 CCDC146Q8IYE0 955 aa24.34■■□□□ 1.49
RXRB-202ENST00000374685 ERVK-7P63135 1459 aa24.34■■□□□ 1.49
RXRB-202ENST00000374685 VGFO15240 615 aaPredicted RBP24.33■■□□□ 1.48
RXRB-202ENST00000374685 MSH5O43196 834 aa24.32■■□□□ 1.48
RXRB-202ENST00000374685 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
RXRB-202ENST00000374685 RICTORQ6R327 1708 aa24.31■■□□□ 1.48
RXRB-202ENST00000374685 SIGLEC1Q9BZZ2 1709 aa24.31■■□□□ 1.48
RXRB-202ENST00000374685 PIK3C2GO75747 1445 aa24.3■■□□□ 1.48
RXRB-202ENST00000374685 RCAN3Q9UKA8 241 aa24.27■■□□□ 1.48
RXRB-202ENST00000374685 CABP2Q9NPB3 220 aa24.27■■□□□ 1.48
RXRB-202ENST00000374685 ASXL1Q8IXJ9 1541 aa24.27■■□□□ 1.48
RXRB-202ENST00000374685 IFT172Q9UG01 1749 aa24.26■■□□□ 1.47
RXRB-202ENST00000374685 KDM5AP29375 1690 aaKnown RBP24.26■■□□□ 1.47
RXRB-202ENST00000374685 SYNMO15061 1565 aa24.26■■□□□ 1.47
RXRB-202ENST00000374685 RPGRIP1LQ68CZ1 1315 aa24.26■■□□□ 1.47
RXRB-202ENST00000374685 CCDC136Q96JN2 1154 aa24.26■■□□□ 1.47
RXRB-202ENST00000374685 KIAA1210Q9ULL0 1709 aa24.25■■□□□ 1.47
RXRB-202ENST00000374685 NRXN1Q9ULB1 1477 aa24.25■■□□□ 1.47
RXRB-202ENST00000374685 PLIN1O60240 522 aa24.25■■□□□ 1.47
RXRB-202ENST00000374685 ERICH6BQ5W0A0 696 aa24.24■■□□□ 1.47
RXRB-202ENST00000374685 SLC52A1Q9NWF4 448 aa24.24■■□□□ 1.47
RXRB-202ENST00000374685 MYOM1P52179 1685 aa24.23■■□□□ 1.47
RXRB-202ENST00000374685 FANCIQ9NVI1 1328 aa24.22■■□□□ 1.47
RXRB-202ENST00000374685 PPLO60437 1756 aa24.22■■□□□ 1.47
RXRB-202ENST00000374685 NEURL4Q96JN8 1562 aa24.22■■□□□ 1.47
RXRB-202ENST00000374685 PLPPR3Q6T4P5 718 aa24.22■■□□□ 1.47
RXRB-202ENST00000374685 MINK1Q8N4C8 1332 aaPredicted RBP24.22■■□□□ 1.47
RXRB-202ENST00000374685 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
RXRB-202ENST00000374685 DIP2BQ9P265 1576 aa24.21■■□□□ 1.47
RXRB-202ENST00000374685 SLC24A1O60721 1099 aa24.21■■□□□ 1.47
RXRB-202ENST00000374685 MORC1Q86VD1 984 aa24.21■■□□□ 1.47
RXRB-202ENST00000374685 NSD3Q9BZ95 1437 aa24.2■■□□□ 1.46
RXRB-202ENST00000374685 RRP1P56182 461 aaKnown RBP24.2■■□□□ 1.46
RXRB-202ENST00000374685 POGKQ9P215 609 aa24.19■■□□□ 1.46
RXRB-202ENST00000374685 EXOC6Q8TAG9 804 aa24.18■■□□□ 1.46
RXRB-202ENST00000374685 ESF1Q9H501 851 aaKnown RBP24.17■■□□□ 1.46
RXRB-202ENST00000374685 APAF1O14727 1248 aa24.17■■□□□ 1.46
RXRB-202ENST00000374685 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
RXRB-202ENST00000374685 PRAM1Q96QH2 718 aa24.16■■□□□ 1.46
RXRB-202ENST00000374685 BLMP54132 1417 aaPredicted RBP24.16■■□□□ 1.46
RXRB-202ENST00000374685 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
RXRB-202ENST00000374685 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
RXRB-202ENST00000374685 EVC2Q86UK5 1308 aa24.16■■□□□ 1.46
RXRB-202ENST00000374685 GLI2P10070 1586 aa24.15■■□□□ 1.46
RXRB-202ENST00000374685 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
RXRB-202ENST00000374685 PLEKHH1Q9ULM0 1364 aa24.15■■□□□ 1.46
RXRB-202ENST00000374685 RNF123Q5XPI4 1314 aa24.15■■□□□ 1.46
RXRB-202ENST00000374685 ARHGAP31Q2M1Z3 1444 aa24.13■■□□□ 1.45
RXRB-202ENST00000374685 QRICH2Q9H0J4 1663 aa24.13■■□□□ 1.45
RXRB-202ENST00000374685 MYO5BQ9ULV0 1848 aa24.12■■□□□ 1.45
RXRB-202ENST00000374685 PIK3C2BO00750 1634 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms