RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.69
PFDN6-201ENST00000374606 SLIT1O75093 1534 aa25.58■■□□□ 1.68
PFDN6-201ENST00000374606 FOXD1Q16676 465 aa25.57■■□□□ 1.68
PFDN6-201ENST00000374606 RPRD2Q5VT52 1461 aaKnown RBP25.55■■□□□ 1.68
PFDN6-201ENST00000374606 SPHKAPQ2M3C7 1700 aa25.54■■□□□ 1.68
PFDN6-201ENST00000374606 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
PFDN6-201ENST00000374606 LTKP29376 864 aa25.53■■□□□ 1.68
PFDN6-201ENST00000374606 ARHGAP31Q2M1Z3 1444 aa25.53■■□□□ 1.68
PFDN6-201ENST00000374606 XIRP1Q702N8 1843 aaKnown RBP25.52■■□□□ 1.68
PFDN6-201ENST00000374606 ANKRD30BQ9BXX2 1392 aa25.52■■□□□ 1.68
PFDN6-201ENST00000374606 EID1Q9Y6B2 187 aa25.5■■□□□ 1.67
PFDN6-201ENST00000374606 TRPM2O94759 1503 aa25.48■■□□□ 1.67
PFDN6-201ENST00000374606 RGS17Q9UGC6 210 aaPredicted RBP25.48■■□□□ 1.67
PFDN6-201ENST00000374606 PIK3C2BO00750 1634 aa25.46■■□□□ 1.67
PFDN6-201ENST00000374606 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
PFDN6-201ENST00000374606 TMEM2Q9UHN6 1383 aa25.44■■□□□ 1.66
PFDN6-201ENST00000374606 CCDC144AA2RUR9 1427 aa25.43■■□□□ 1.66
PFDN6-201ENST00000374606 SIN3AQ96ST3 1273 aa25.42■■□□□ 1.66
PFDN6-201ENST00000374606 STAG3Q9UJ98 1225 aa25.42■■□□□ 1.66
PFDN6-201ENST00000374606 TMEM94Q12767 1356 aa25.41■■□□□ 1.66
PFDN6-201ENST00000374606 KDM5AP29375 1690 aaKnown RBP25.4■■□□□ 1.66
PFDN6-201ENST00000374606 CLTCL1P53675 1640 aa25.4■■□□□ 1.66
PFDN6-201ENST00000374606 NOS1P29475 1434 aa25.39■■□□□ 1.66
PFDN6-201ENST00000374606 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
PFDN6-201ENST00000374606 NEUROD1Q13562 356 aa25.39■■□□□ 1.66
PFDN6-201ENST00000374606 ROBO1Q9Y6N7 1651 aa25.36■■□□□ 1.65
PFDN6-201ENST00000374606 KCNA6P17658 529 aa25.36■■□□□ 1.65
PFDN6-201ENST00000374606 POTEAQ6S8J7 498 aa25.33■■□□□ 1.65
PFDN6-201ENST00000374606 PROSER2Q86WR7 435 aaPredicted RBP25.33■■□□□ 1.65
PFDN6-201ENST00000374606 TONSLQ96HA7 1378 aa25.32■■□□□ 1.64
PFDN6-201ENST00000374606 IDI1Q13907 227 aa25.32■■□□□ 1.64
PFDN6-201ENST00000374606 NKTRP30414 1462 aaKnown RBP25.32■■□□□ 1.64
PFDN6-201ENST00000374606 KIF1BO60333 1816 aa25.31■■□□□ 1.64
PFDN6-201ENST00000374606 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
PFDN6-201ENST00000374606 SLC26A8Q96RN1 970 aa25.3■■□□□ 1.64
PFDN6-201ENST00000374606 ADGRB3O60242 1522 aa25.29■■□□□ 1.64
PFDN6-201ENST00000374606 RBM33Q96EV2 1170 aaKnown RBP25.26■■□□□ 1.63
PFDN6-201ENST00000374606 TIMELESSQ9UNS1 1208 aa25.26■■□□□ 1.63
PFDN6-201ENST00000374606 MSH6P52701 1360 aa25.26■■□□□ 1.63
PFDN6-201ENST00000374606 SLC52A1Q9NWF4 448 aa25.24■■□□□ 1.63
PFDN6-201ENST00000374606 SPATA31E1Q6ZUB1 1445 aa25.23■■□□□ 1.63
PFDN6-201ENST00000374606 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
PFDN6-201ENST00000374606 BCANQ96GW7 911 aa25.21■■□□□ 1.63
PFDN6-201ENST00000374606 JCADQ9P266 1359 aa25.2■■□□□ 1.63
PFDN6-201ENST00000374606 SLAIN2Q9P270 581 aa25.19■■□□□ 1.62
PFDN6-201ENST00000374606 SETD1AO15047 1707 aaKnown RBP25.19■■□□□ 1.62
PFDN6-201ENST00000374606 TMEM131LA2VDJ0 1609 aa25.17■■□□□ 1.62
PFDN6-201ENST00000374606 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
PFDN6-201ENST00000374606 L3MBTL2Q969R5 705 aa25.16■■□□□ 1.62
PFDN6-201ENST00000374606 CHD2O14647 1828 aaKnown RBP25.16■■□□□ 1.62
PFDN6-201ENST00000374606 PLEKHG1Q9ULL1 1385 aa25.16■■□□□ 1.62
PFDN6-201ENST00000374606 MYO5BQ9ULV0 1848 aa25.15■■□□□ 1.62
PFDN6-201ENST00000374606 ZFYVE9O95405 1425 aa25.14■■□□□ 1.62
PFDN6-201ENST00000374606 RGL3Q3MIN7 710 aa25.14■■□□□ 1.62
PFDN6-201ENST00000374606 COL16A1Q07092 1604 aaPredicted RBP25.13■■□□□ 1.61
PFDN6-201ENST00000374606 IFT172Q9UG01 1749 aa25.13■■□□□ 1.61
PFDN6-201ENST00000374606 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
PFDN6-201ENST00000374606 RIMS2Q9UQ26 1411 aa25.11■■□□□ 1.61
PFDN6-201ENST00000374606 HDGFP51858 240 aaKnown RBP25.1■■□□□ 1.61
PFDN6-201ENST00000374606 PPLO60437 1756 aa25.1■■□□□ 1.61
PFDN6-201ENST00000374606 NCOA3Q9Y6Q9 1424 aa25.1■■□□□ 1.61
PFDN6-201ENST00000374606 ZNF326Q5BKZ1 582 aaKnown RBP25.09■■□□□ 1.61
PFDN6-201ENST00000374606 DCAF11Q8TEB1 546 aa25.07■■□□□ 1.6
PFDN6-201ENST00000374606 SPATA31A6Q5VVP1 1343 aa25.07■■□□□ 1.6
PFDN6-201ENST00000374606 NEXMIFQ5QGS0 1516 aa25.07■■□□□ 1.6
PFDN6-201ENST00000374606 LRP6O75581 1613 aa25.06■■□□□ 1.6
PFDN6-201ENST00000374606 TBX22Q9Y458 520 aa25.06■■□□□ 1.6
PFDN6-201ENST00000374606 MYOM2P54296 1465 aa25.06■■□□□ 1.6
PFDN6-201ENST00000374606 C14orf37Q86TY3 774 aa25.05■■□□□ 1.6
PFDN6-201ENST00000374606 MEX3CQ5U5Q3 659 aaKnown RBP25.04■■□□□ 1.6
PFDN6-201ENST00000374606 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
PFDN6-201ENST00000374606 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
PFDN6-201ENST00000374606 AHDC1Q5TGY3 1603 aaPredicted RBP25.03■■□□□ 1.6
PFDN6-201ENST00000374606 DIP2AQ14689 1571 aa25.02■■□□□ 1.6
PFDN6-201ENST00000374606 ZNF772Q68DY9 489 aaPredicted RBP25.02■■□□□ 1.6
PFDN6-201ENST00000374606 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
PFDN6-201ENST00000374606 SHPRHQ149N8 1683 aa25.01■■□□□ 1.59
PFDN6-201ENST00000374606 CADPS2Q86UW7 1296 aa25.01■■□□□ 1.59
PFDN6-201ENST00000374606 STAC3Q96MF2 364 aa25.01■■□□□ 1.59
PFDN6-201ENST00000374606 SIPA1L2Q9P2F8 1722 aaPredicted RBP25■■□□□ 1.59
PFDN6-201ENST00000374606 PRAG1Q86YV5 1406 aa25■■□□□ 1.59
PFDN6-201ENST00000374606 ADAMTS13Q76LX8 1427 aa24.99■■□□□ 1.59
PFDN6-201ENST00000374606 PIK3R4Q99570 1358 aa24.99■■□□□ 1.59
PFDN6-201ENST00000374606 ATF3P18847 181 aa24.98■■□□□ 1.59
PFDN6-201ENST00000374606 C19orf44Q9H6X5 657 aa24.98■■□□□ 1.59
PFDN6-201ENST00000374606 UPF1Q92900 1129 aaKnown RBP eCLIP24.96■■□□□ 1.59
PFDN6-201ENST00000374606 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
PFDN6-201ENST00000374606 TRPM1Q7Z4N2 1603 aa24.95■■□□□ 1.58
PFDN6-201ENST00000374606 NBPF8Q3BBV2 869 aa24.95■■□□□ 1.58
PFDN6-201ENST00000374606 NUTM2DQ5VT03 806 aaPredicted RBP24.94■■□□□ 1.58
PFDN6-201ENST00000374606 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
PFDN6-201ENST00000374606 VGFO15240 615 aaPredicted RBP24.92■■□□□ 1.58
PFDN6-201ENST00000374606 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
PFDN6-201ENST00000374606 PIK3C2GO75747 1445 aa24.91■■□□□ 1.58
PFDN6-201ENST00000374606 ADGRF5Q8IZF2 1346 aa24.9■■□□□ 1.58
PFDN6-201ENST00000374606 LAMC1P11047 1609 aa24.9■■□□□ 1.58
PFDN6-201ENST00000374606 RXRBP28702 533 aa24.89■■□□□ 1.58
PFDN6-201ENST00000374606 BRINP3Q76B58 766 aa24.89■■□□□ 1.58
PFDN6-201ENST00000374606 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
PFDN6-201ENST00000374606 DCCP43146 1447 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms