RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 FANCAO15360 1455 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 DNMBPQ6XZF7 1577 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 GORABQ5T7V8 394 aa7.89□□□□□ -1.15
PTPN3-202ENST00000374541 NLRP13Q86W25 1043 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 DRC7Q8IY82 874 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 TAOK2Q9UL54 1235 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 ZNF608Q9ULD9 1512 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-202ENST00000374541 GOLGA6L1Q8N7Z2 621 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 CCDC34Q96HJ3 373 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 KIF21BO75037 1637 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 ZC3H6P61129 1189 aaKnown RBP7.88□□□□□ -1.15
PTPN3-202ENST00000374541 TPM4P67936 248 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 FBXO41Q8TF61 875 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 ABCA5Q8WWZ7 1642 aa7.88□□□□□ -1.15
PTPN3-202ENST00000374541 FAM135AQ9P2D6 1515 aa7.87□□□□□ -1.15
PTPN3-202ENST00000374541 DHX57Q6P158 1386 aaKnown RBP7.87□□□□□ -1.15
PTPN3-202ENST00000374541 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
PTPN3-202ENST00000374541 SUPT16HQ9Y5B9 1047 aaKnown RBP7.87□□□□□ -1.15
PTPN3-202ENST00000374541 NOL10Q9BSC4 688 aaKnown RBP7.87□□□□□ -1.15
PTPN3-202ENST00000374541 DEKP35659 375 aaKnown RBP7.87□□□□□ -1.15
PTPN3-202ENST00000374541 ASXL2Q76L83 1435 aa7.87□□□□□ -1.15
PTPN3-202ENST00000374541 USP21Q9UK80 565 aa7.86□□□□□ -1.15
PTPN3-202ENST00000374541 FAM177BA6PVY3 158 aa7.86□□□□□ -1.15
PTPN3-202ENST00000374541 SLC52A1Q9NWF4 448 aa7.86□□□□□ -1.15
PTPN3-202ENST00000374541 RGS3P49796 1198 aa7.86□□□□□ -1.15
PTPN3-202ENST00000374541 THOC2Q8NI27 1593 aaKnown RBP7.86□□□□□ -1.15
PTPN3-202ENST00000374541 AK7Q96M32 723 aa7.86□□□□□ -1.15
PTPN3-202ENST00000374541 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
PTPN3-202ENST00000374541 TATP17735 454 aaPredicted RBP7.85□□□□□ -1.15
PTPN3-202ENST00000374541 VPS37DQ86XT2 251 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 EVC2Q86UK5 1308 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 ADGRL1O94910 1474 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 CCER2I3L3R5 266 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 RTN4Q9NQC3 1192 aaKnown RBP7.85□□□□□ -1.15
PTPN3-202ENST00000374541 CSPP1Q1MSJ5 1256 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 EXOC5O00471 708 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 AIDAQ96BJ3 306 aa7.85□□□□□ -1.15
PTPN3-202ENST00000374541 GRIN2AQ12879 1464 aa7.84□□□□□ -1.15
PTPN3-202ENST00000374541 QTRT2Q9H974 415 aaKnown RBP7.84□□□□□ -1.15
PTPN3-202ENST00000374541 FOXO3O43524 673 aa7.84□□□□□ -1.15
PTPN3-202ENST00000374541 RAD21O60216 631 aa7.84□□□□□ -1.15
PTPN3-202ENST00000374541 ZNF219Q9P2Y4 722 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-202ENST00000374541 CC2D1BQ5T0F9 858 aaKnown RBP7.84□□□□□ -1.15
PTPN3-202ENST00000374541 SETQ01105 290 aaPredicted RBP7.84□□□□□ -1.15
PTPN3-202ENST00000374541 NOC3LQ8WTT2 800 aaKnown RBP7.84□□□□□ -1.16
PTPN3-202ENST00000374541 TNRQ92752 1358 aa7.84□□□□□ -1.16
PTPN3-202ENST00000374541 IGF1RP08069 1367 aa7.83□□□□□ -1.16
PTPN3-202ENST00000374541 ZPR1O75312 459 aa7.83□□□□□ -1.16
PTPN3-202ENST00000374541 PHLDB1Q86UU1 1377 aa7.83□□□□□ -1.16
PTPN3-202ENST00000374541 TFCP2L1Q9NZI6 479 aa7.83□□□□□ -1.16
PTPN3-202ENST00000374541 APBA3O96018 575 aa7.82□□□□□ -1.16
PTPN3-202ENST00000374541 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-202ENST00000374541 SAMD1Q6SPF0 538 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-202ENST00000374541 AMOTL2Q9Y2J4 779 aa7.82□□□□□ -1.16
PTPN3-202ENST00000374541 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
PTPN3-202ENST00000374541 TCERG1O14776 1098 aaKnown RBP7.82□□□□□ -1.16
PTPN3-202ENST00000374541 IPO8O15397 1037 aaKnown RBP7.82□□□□□ -1.16
PTPN3-202ENST00000374541 PHF14O94880 888 aa7.82□□□□□ -1.16
PTPN3-202ENST00000374541 CNKSR2Q8WXI2 1034 aa7.82□□□□□ -1.16
PTPN3-202ENST00000374541 BICDL1Q6ZP65 573 aa7.82□□□□□ -1.16
PTPN3-202ENST00000374541 ROCK2O75116 1388 aaKnown RBP7.82□□□□□ -1.16
PTPN3-202ENST00000374541 GNL2Q13823 731 aaKnown RBP7.81□□□□□ -1.16
PTPN3-202ENST00000374541 ILDR1Q86SU0 546 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-202ENST00000374541 CCDC144AA2RUR9 1427 aa7.81□□□□□ -1.16
PTPN3-202ENST00000374541 SMG6Q86US8 1419 aaKnown RBP7.81□□□□□ -1.16
PTPN3-202ENST00000374541 FRAT1Q92837 279 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-202ENST00000374541 KIAA0586Q9BVV6 1533 aa7.81□□□□□ -1.16
PTPN3-202ENST00000374541 FBXO31Q5XUX0 539 aaPredicted RBP7.81□□□□□ -1.16
PTPN3-202ENST00000374541 KRT28Q7Z3Y7 464 aa7.81□□□□□ -1.16
PTPN3-202ENST00000374541 GOLGA6L3A6NEY3 463 aa7.81□□□□□ -1.16
PTPN3-202ENST00000374541 CALD1Q05682 793 aaKnown RBP7.81□□□□□ -1.16
PTPN3-202ENST00000374541 STK31Q9BXU1 1019 aa7.81□□□□□ -1.16
PTPN3-202ENST00000374541 HDAC5Q9UQL6 1122 aa7.81□□□□□ -1.16
PTPN3-202ENST00000374541 TPRNQ4KMQ1 711 aa7.8□□□□□ -1.16
PTPN3-202ENST00000374541 KIAA1211Q6ZU35 1233 aa7.8□□□□□ -1.16
PTPN3-202ENST00000374541 NAP1L2Q9ULW6 460 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-202ENST00000374541 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
PTPN3-202ENST00000374541 NPHP3Q7Z494 1330 aa7.79□□□□□ -1.16
PTPN3-202ENST00000374541 KIF15Q9NS87 1388 aa7.79□□□□□ -1.16
PTPN3-202ENST00000374541 CHMP4CQ96CF2 233 aa7.79□□□□□ -1.16
PTPN3-202ENST00000374541 RWDD1Q9H446 243 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-202ENST00000374541 TRPC5Q9UL62 973 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-202ENST00000374541 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-202ENST00000374541 CABP4P57796 275 aa7.79□□□□□ -1.16
PTPN3-202ENST00000374541 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPN3-202ENST00000374541 KIF6Q6ZMV9 814 aa7.79□□□□□ -1.16
PTPN3-202ENST00000374541 EPRSP07814 1512 aaKnown RBP7.79□□□□□ -1.16
PTPN3-202ENST00000374541 RBM5P52756 815 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTPN3-202ENST00000374541 ZNF622Q969S3 477 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTPN3-202ENST00000374541 TMEM132EQ6IEE7 984 aa7.78□□□□□ -1.16
PTPN3-202ENST00000374541 SPG7Q9UQ90 795 aa7.78□□□□□ -1.16
PTPN3-202ENST00000374541 AMOTL1Q8IY63 956 aa7.78□□□□□ -1.16
PTPN3-202ENST00000374541 ABCA10Q8WWZ4 1543 aa7.78□□□□□ -1.16
PTPN3-202ENST00000374541 A0A0U1RQG5 324 aaPredicted RBP7.78□□□□□ -1.16
PTPN3-202ENST00000374541 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
PTPN3-202ENST00000374541 TPM3P06753 285 aa7.78□□□□□ -1.16
PTPN3-202ENST00000374541 GPS2Q13227 327 aa7.78□□□□□ -1.16
PTPN3-202ENST00000374541 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-202ENST00000374541 MYCNP04198 464 aaPredicted RBP7.77□□□□□ -1.17
PTPN3-202ENST00000374541 CALRP27797 417 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms