RNA–Protein interactions for RNA: ENST00000374461.1

SVEP1-201, Transcript of sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SVEP1, Length 3,257 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVEP1-201ENST00000374461 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
SVEP1-201ENST00000374461 KIF13AQ9H1H9 1805 aa16.42■□□□□ 0.22
SVEP1-201ENST00000374461 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
SVEP1-201ENST00000374461 CCDC184Q52MB2 194 aa16.41■□□□□ 0.22
SVEP1-201ENST00000374461 TMF1P82094 1093 aa16.4■□□□□ 0.22
SVEP1-201ENST00000374461 RNF17Q9BXT8 1623 aaKnown RBP16.4■□□□□ 0.22
SVEP1-201ENST00000374461 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
SVEP1-201ENST00000374461 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
SVEP1-201ENST00000374461 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
SVEP1-201ENST00000374461 TESK2Q96S53 571 aa16.39■□□□□ 0.21
SVEP1-201ENST00000374461 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
SVEP1-201ENST00000374461 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
SVEP1-201ENST00000374461 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
SVEP1-201ENST00000374461 LMTK2Q8IWU2 1503 aa16.37■□□□□ 0.21
SVEP1-201ENST00000374461 VGFO15240 615 aaPredicted RBP16.37■□□□□ 0.21
SVEP1-201ENST00000374461 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
SVEP1-201ENST00000374461 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
SVEP1-201ENST00000374461 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
SVEP1-201ENST00000374461 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
SVEP1-201ENST00000374461 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
SVEP1-201ENST00000374461 CCER2I3L3R5 266 aa16.34■□□□□ 0.21
SVEP1-201ENST00000374461 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
SVEP1-201ENST00000374461 PANK3Q9H999 370 aa16.34■□□□□ 0.21
SVEP1-201ENST00000374461 TRPM1Q7Z4N2 1603 aa16.34■□□□□ 0.21
SVEP1-201ENST00000374461 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
SVEP1-201ENST00000374461 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
SVEP1-201ENST00000374461 ANP32EQ9BTT0 268 aa16.32■□□□□ 0.2
SVEP1-201ENST00000374461 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
SVEP1-201ENST00000374461 B4GALNT3Q6L9W6 998 aa16.3■□□□□ 0.2
SVEP1-201ENST00000374461 C14orf93Q9H972 538 aaKnown RBP16.3■□□□□ 0.2
SVEP1-201ENST00000374461 KIF1BO60333 1816 aa16.29■□□□□ 0.2
SVEP1-201ENST00000374461 RPGRIP1LQ68CZ1 1315 aa16.29■□□□□ 0.2
SVEP1-201ENST00000374461 MADDQ8WXG6 1647 aa16.29■□□□□ 0.2
SVEP1-201ENST00000374461 SIGLEC1Q9BZZ2 1709 aa16.29■□□□□ 0.2
SVEP1-201ENST00000374461 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
SVEP1-201ENST00000374461 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
SVEP1-201ENST00000374461 SCAF11Q99590 1463 aaKnown RBP16.28■□□□□ 0.2
SVEP1-201ENST00000374461 MROH2AA6NES4 1674 aa16.28■□□□□ 0.2
SVEP1-201ENST00000374461 SYNMO15061 1565 aa16.28■□□□□ 0.2
SVEP1-201ENST00000374461 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
SVEP1-201ENST00000374461 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
SVEP1-201ENST00000374461 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
SVEP1-201ENST00000374461 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
SVEP1-201ENST00000374461 ERVK-7P63135 1459 aa16.26■□□□□ 0.19
SVEP1-201ENST00000374461 POGKQ9P215 609 aa16.25■□□□□ 0.19
SVEP1-201ENST00000374461 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
SVEP1-201ENST00000374461 KNSTRNQ9Y448 316 aa16.25■□□□□ 0.19
SVEP1-201ENST00000374461 CDCA8Q53HL2 280 aa16.24■□□□□ 0.19
SVEP1-201ENST00000374461 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
SVEP1-201ENST00000374461 AGLP35573 1532 aa16.23■□□□□ 0.19
SVEP1-201ENST00000374461 PIK3C2GO75747 1445 aa16.23■□□□□ 0.19
SVEP1-201ENST00000374461 MYOM2P54296 1465 aa16.22■□□□□ 0.19
SVEP1-201ENST00000374461 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
SVEP1-201ENST00000374461 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
SVEP1-201ENST00000374461 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
SVEP1-201ENST00000374461 TNRQ92752 1358 aa16.2■□□□□ 0.18
SVEP1-201ENST00000374461 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
SVEP1-201ENST00000374461 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
SVEP1-201ENST00000374461 NBR1Q14596 966 aa16.2■□□□□ 0.18
SVEP1-201ENST00000374461 PER1O15534 1290 aaPredicted RBP16.19■□□□□ 0.18
SVEP1-201ENST00000374461 WAPLQ7Z5K2 1190 aa16.19■□□□□ 0.18
SVEP1-201ENST00000374461 PREX1Q8TCU6 1659 aa16.19■□□□□ 0.18
SVEP1-201ENST00000374461 KTN1Q86UP2 1357 aaKnown RBP16.18■□□□□ 0.18
SVEP1-201ENST00000374461 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
SVEP1-201ENST00000374461 SLC26A8Q96RN1 970 aa16.18■□□□□ 0.18
SVEP1-201ENST00000374461 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
SVEP1-201ENST00000374461 RIMS2Q9UQ26 1411 aa16.16■□□□□ 0.18
SVEP1-201ENST00000374461 TXNDC2Q86VQ3 553 aa16.16■□□□□ 0.18
SVEP1-201ENST00000374461 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
SVEP1-201ENST00000374461 REREQ9P2R6 1566 aa16.15■□□□□ 0.18
SVEP1-201ENST00000374461 RALBP1Q15311 655 aa16.14■□□□□ 0.18
SVEP1-201ENST00000374461 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
SVEP1-201ENST00000374461 A2ML1A8K2U0 1454 aa16.14■□□□□ 0.17
SVEP1-201ENST00000374461 NRXN1Q9ULB1 1477 aa16.14■□□□□ 0.17
SVEP1-201ENST00000374461 MYBBP1AQ9BQG0 1328 aaKnown RBP16.14■□□□□ 0.17
SVEP1-201ENST00000374461 NUTM2FA1L443 756 aa16.13■□□□□ 0.17
SVEP1-201ENST00000374461 LTKP29376 864 aa16.13■□□□□ 0.17
SVEP1-201ENST00000374461 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
SVEP1-201ENST00000374461 MYO5BQ9ULV0 1848 aa16.13■□□□□ 0.17
SVEP1-201ENST00000374461 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
SVEP1-201ENST00000374461 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
SVEP1-201ENST00000374461 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.11■□□□□ 0.17
SVEP1-201ENST00000374461 PPLO60437 1756 aa16.11■□□□□ 0.17
SVEP1-201ENST00000374461 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
SVEP1-201ENST00000374461 CARD14Q9BXL6 1004 aa16.11■□□□□ 0.17
SVEP1-201ENST00000374461 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
SVEP1-201ENST00000374461 NEURL4Q96JN8 1562 aa16.1■□□□□ 0.17
SVEP1-201ENST00000374461 LAMC1P11047 1609 aa16.09■□□□□ 0.17
SVEP1-201ENST00000374461 POLR1AO95602 1720 aaPredicted RBP16.09■□□□□ 0.17
SVEP1-201ENST00000374461 IQGAP1P46940 1657 aa16.09■□□□□ 0.17
SVEP1-201ENST00000374461 ADGRB1O14514 1584 aa16.08■□□□□ 0.17
SVEP1-201ENST00000374461 MSH5O43196 834 aa16.08■□□□□ 0.17
SVEP1-201ENST00000374461 YTHDC2Q9H6S0 1430 aaKnown RBP16.08■□□□□ 0.17
SVEP1-201ENST00000374461 SPATA31D1Q6ZQQ2 1576 aa16.08■□□□□ 0.16
SVEP1-201ENST00000374461 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
SVEP1-201ENST00000374461 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
SVEP1-201ENST00000374461 IFT172Q9UG01 1749 aa16.08■□□□□ 0.16
SVEP1-201ENST00000374461 METP08581 1390 aa16.08■□□□□ 0.16
SVEP1-201ENST00000374461 CDK19Q9BWU1 502 aa16.07■□□□□ 0.16
SVEP1-201ENST00000374461 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms