RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 C3P01024 1663 aa13.76□□□□□ -0.21
PTPN20-202ENST00000374339 MYOM2P54296 1465 aa13.75□□□□□ -0.21
PTPN20-202ENST00000374339 NBPF8Q3BBV2 869 aa13.75□□□□□ -0.21
PTPN20-202ENST00000374339 ZNF326Q5BKZ1 582 aaKnown RBP13.75□□□□□ -0.21
PTPN20-202ENST00000374339 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
PTPN20-202ENST00000374339 TRPM1Q7Z4N2 1603 aa13.75□□□□□ -0.21
PTPN20-202ENST00000374339 PPLO60437 1756 aa13.75□□□□□ -0.21
PTPN20-202ENST00000374339 TMEM131LA2VDJ0 1609 aa13.74□□□□□ -0.21
PTPN20-202ENST00000374339 MADDQ8WXG6 1647 aa13.74□□□□□ -0.21
PTPN20-202ENST00000374339 KDM5AP29375 1690 aaKnown RBP13.74□□□□□ -0.21
PTPN20-202ENST00000374339 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
PTPN20-202ENST00000374339 CHGAP10645 457 aaKnown RBP13.73□□□□□ -0.21
PTPN20-202ENST00000374339 IDI1Q13907 227 aa13.73□□□□□ -0.21
PTPN20-202ENST00000374339 KIAA1210Q9ULL0 1709 aa13.73□□□□□ -0.21
PTPN20-202ENST00000374339 TNRQ92752 1358 aa13.72□□□□□ -0.21
PTPN20-202ENST00000374339 LAMC1P11047 1609 aa13.72□□□□□ -0.21
PTPN20-202ENST00000374339 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.21
PTPN20-202ENST00000374339 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.21
PTPN20-202ENST00000374339 NLRP1Q9C000 1473 aa13.71□□□□□ -0.22
PTPN20-202ENST00000374339 EIF4G2P78344 907 aaKnown RBP eCLIP13.71□□□□□ -0.22
PTPN20-202ENST00000374339 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
PTPN20-202ENST00000374339 NRXN1Q9ULB1 1477 aa13.7□□□□□ -0.22
PTPN20-202ENST00000374339 ROCK2O75116 1388 aaKnown RBP13.7□□□□□ -0.22
PTPN20-202ENST00000374339 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
PTPN20-202ENST00000374339 VGFO15240 615 aaPredicted RBP13.69□□□□□ -0.22
PTPN20-202ENST00000374339 ZFYVE9O95405 1425 aa13.68□□□□□ -0.22
PTPN20-202ENST00000374339 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
PTPN20-202ENST00000374339 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
PTPN20-202ENST00000374339 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
PTPN20-202ENST00000374339 UBR1Q8IWV7 1749 aa13.66□□□□□ -0.22
PTPN20-202ENST00000374339 USP47Q96K76 1375 aa13.65□□□□□ -0.22
PTPN20-202ENST00000374339 PIK3C2GO75747 1445 aa13.65□□□□□ -0.22
PTPN20-202ENST00000374339 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
PTPN20-202ENST00000374339 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
PTPN20-202ENST00000374339 CEBPAP49715 358 aaPredicted RBP13.64□□□□□ -0.23
PTPN20-202ENST00000374339 HDGFP51858 240 aaKnown RBP13.64□□□□□ -0.23
PTPN20-202ENST00000374339 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
PTPN20-202ENST00000374339 ADGRF5Q8IZF2 1346 aa13.63□□□□□ -0.23
PTPN20-202ENST00000374339 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
PTPN20-202ENST00000374339 IQGAP1P46940 1657 aa13.62□□□□□ -0.23
PTPN20-202ENST00000374339 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTPN20-202ENST00000374339 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
PTPN20-202ENST00000374339 NBPF1Q3BBV0 1214 aa13.6□□□□□ -0.23
PTPN20-202ENST00000374339 ZNF142P52746 1687 aaPredicted RBP13.6□□□□□ -0.23
PTPN20-202ENST00000374339 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
PTPN20-202ENST00000374339 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
PTPN20-202ENST00000374339 SCAF11Q99590 1463 aaKnown RBP13.59□□□□□ -0.23
PTPN20-202ENST00000374339 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
PTPN20-202ENST00000374339 PTPRMP28827 1452 aa13.59□□□□□ -0.23
PTPN20-202ENST00000374339 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
PTPN20-202ENST00000374339 HIRIP3Q9BW71 556 aaPredicted RBP13.58□□□□□ -0.23
PTPN20-202ENST00000374339 C14orf93Q9H972 538 aaKnown RBP13.58□□□□□ -0.23
PTPN20-202ENST00000374339 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
PTPN20-202ENST00000374339 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
PTPN20-202ENST00000374339 SLIT1O75093 1534 aa13.57□□□□□ -0.24
PTPN20-202ENST00000374339 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
PTPN20-202ENST00000374339 ADGRB1O14514 1584 aa13.56□□□□□ -0.24
PTPN20-202ENST00000374339 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
PTPN20-202ENST00000374339 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
PTPN20-202ENST00000374339 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
PTPN20-202ENST00000374339 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-202ENST00000374339 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
PTPN20-202ENST00000374339 ALKQ9UM73 1620 aa13.55□□□□□ -0.24
PTPN20-202ENST00000374339 SETD1AO15047 1707 aaKnown RBP13.52□□□□□ -0.24
PTPN20-202ENST00000374339 NRXN3Q9Y4C0 1643 aa13.52□□□□□ -0.25
PTPN20-202ENST00000374339 CCDC7Q96M83 1385 aa13.52□□□□□ -0.25
PTPN20-202ENST00000374339 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
PTPN20-202ENST00000374339 WASHC2AQ641Q2 1341 aa13.51□□□□□ -0.25
PTPN20-202ENST00000374339 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
PTPN20-202ENST00000374339 TXNDC2Q86VQ3 553 aa13.5□□□□□ -0.25
PTPN20-202ENST00000374339 ASXL1Q8IXJ9 1541 aa13.5□□□□□ -0.25
PTPN20-202ENST00000374339 KCNA4P22459 653 aa13.49□□□□□ -0.25
PTPN20-202ENST00000374339 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
PTPN20-202ENST00000374339 TMF1P82094 1093 aa13.48□□□□□ -0.25
PTPN20-202ENST00000374339 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
PTPN20-202ENST00000374339 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
PTPN20-202ENST00000374339 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
PTPN20-202ENST00000374339 YTHDC2Q9H6S0 1430 aaKnown RBP13.48□□□□□ -0.25
PTPN20-202ENST00000374339 QRICH2Q9H0J4 1663 aa13.48□□□□□ -0.25
PTPN20-202ENST00000374339 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
PTPN20-202ENST00000374339 CDCA8Q53HL2 280 aa13.47□□□□□ -0.25
PTPN20-202ENST00000374339 BCANQ96GW7 911 aa13.47□□□□□ -0.25
PTPN20-202ENST00000374339 TESK2Q96S53 571 aa13.47□□□□□ -0.25
PTPN20-202ENST00000374339 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
PTPN20-202ENST00000374339 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.25
PTPN20-202ENST00000374339 LTKP29376 864 aa13.46□□□□□ -0.25
PTPN20-202ENST00000374339 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
PTPN20-202ENST00000374339 KNDC1Q76NI1 1749 aa13.46□□□□□ -0.25
PTPN20-202ENST00000374339 DLC1Q96QB1 1528 aa13.46□□□□□ -0.25
PTPN20-202ENST00000374339 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
PTPN20-202ENST00000374339 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
PTPN20-202ENST00000374339 MED14O60244 1454 aa13.44□□□□□ -0.26
PTPN20-202ENST00000374339 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
PTPN20-202ENST00000374339 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
PTPN20-202ENST00000374339 DISP3Q9P2K9 1392 aa13.43□□□□□ -0.26
PTPN20-202ENST00000374339 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
PTPN20-202ENST00000374339 CPS1P31327 1500 aa13.42□□□□□ -0.26
PTPN20-202ENST00000374339 STK26Q9P289 416 aa13.42□□□□□ -0.26
PTPN20-202ENST00000374339 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
PTPN20-202ENST00000374339 TECPR2O15040 1411 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms