RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
UBXN11-204ENST00000374217 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
UBXN11-204ENST00000374217 CEBPAP49715 358 aaPredicted RBP20.3■□□□□ 0.84
UBXN11-204ENST00000374217 IDI1Q13907 227 aa20.3■□□□□ 0.84
UBXN11-204ENST00000374217 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
UBXN11-204ENST00000374217 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
UBXN11-204ENST00000374217 SPATA31E1Q6ZUB1 1445 aa20.29■□□□□ 0.84
UBXN11-204ENST00000374217 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
UBXN11-204ENST00000374217 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
UBXN11-204ENST00000374217 PIK3C2BO00750 1634 aa20.27■□□□□ 0.84
UBXN11-204ENST00000374217 FBXO41Q8TF61 875 aa20.27■□□□□ 0.84
UBXN11-204ENST00000374217 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.83
UBXN11-204ENST00000374217 TNRQ92752 1358 aa20.26■□□□□ 0.83
UBXN11-204ENST00000374217 ADAMTSL3P82987 1691 aa20.26■□□□□ 0.83
UBXN11-204ENST00000374217 C3P01024 1663 aa20.26■□□□□ 0.83
UBXN11-204ENST00000374217 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
UBXN11-204ENST00000374217 NEURL4Q96JN8 1562 aa20.24■□□□□ 0.83
UBXN11-204ENST00000374217 DEKP35659 375 aaKnown RBP20.24■□□□□ 0.83
UBXN11-204ENST00000374217 EIF4G2P78344 907 aaKnown RBP eCLIP20.23■□□□□ 0.83
UBXN11-204ENST00000374217 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
UBXN11-204ENST00000374217 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
UBXN11-204ENST00000374217 NOP58Q9Y2X3 529 aaKnown RBP20.23■□□□□ 0.83
UBXN11-204ENST00000374217 NBPF8Q3BBV2 869 aa20.2■□□□□ 0.82
UBXN11-204ENST00000374217 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
UBXN11-204ENST00000374217 HSPA5P11021 654 aaKnown RBP20.2■□□□□ 0.82
UBXN11-204ENST00000374217 UHRF1BP1Q6BDS2 1440 aa20.18■□□□□ 0.82
UBXN11-204ENST00000374217 PRKRIP1Q9H875 184 aaPredicted RBP20.18■□□□□ 0.82
UBXN11-204ENST00000374217 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
UBXN11-204ENST00000374217 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
UBXN11-204ENST00000374217 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
UBXN11-204ENST00000374217 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
UBXN11-204ENST00000374217 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
UBXN11-204ENST00000374217 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
UBXN11-204ENST00000374217 VGFO15240 615 aaPredicted RBP20.13■□□□□ 0.81
UBXN11-204ENST00000374217 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
UBXN11-204ENST00000374217 PTPRMP28827 1452 aa20.13■□□□□ 0.81
UBXN11-204ENST00000374217 A2ML1A8K2U0 1454 aa20.12■□□□□ 0.81
UBXN11-204ENST00000374217 MYOM2P54296 1465 aa20.12■□□□□ 0.81
UBXN11-204ENST00000374217 RNF123Q5XPI4 1314 aa20.12■□□□□ 0.81
UBXN11-204ENST00000374217 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
UBXN11-204ENST00000374217 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
UBXN11-204ENST00000374217 PPLO60437 1756 aa20.11■□□□□ 0.81
UBXN11-204ENST00000374217 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
UBXN11-204ENST00000374217 HDGFP51858 240 aaKnown RBP20.1■□□□□ 0.81
UBXN11-204ENST00000374217 ROCK2O75116 1388 aaKnown RBP20.1■□□□□ 0.81
UBXN11-204ENST00000374217 NEXMIFQ5QGS0 1516 aa20.09■□□□□ 0.81
UBXN11-204ENST00000374217 RALGAPBQ86X10 1494 aa20.09■□□□□ 0.81
UBXN11-204ENST00000374217 ANP32AP39687 249 aaKnown RBP20.09■□□□□ 0.81
UBXN11-204ENST00000374217 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
UBXN11-204ENST00000374217 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
UBXN11-204ENST00000374217 MYO3AQ8NEV4 1616 aa20.08■□□□□ 0.8
UBXN11-204ENST00000374217 B4GALNT3Q6L9W6 998 aa20.08■□□□□ 0.8
UBXN11-204ENST00000374217 KDM5AP29375 1690 aaKnown RBP20.08■□□□□ 0.8
UBXN11-204ENST00000374217 UBR1Q8IWV7 1749 aa20.07■□□□□ 0.8
UBXN11-204ENST00000374217 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.07■□□□□ 0.8
UBXN11-204ENST00000374217 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
UBXN11-204ENST00000374217 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
UBXN11-204ENST00000374217 IPO9Q96P70 1041 aaKnown RBP20.06■□□□□ 0.8
UBXN11-204ENST00000374217 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
UBXN11-204ENST00000374217 SETD1BQ9UPS6 1966 aaKnown RBP20.05■□□□□ 0.8
UBXN11-204ENST00000374217 ZFYVE9O95405 1425 aa20.05■□□□□ 0.8
UBXN11-204ENST00000374217 LMTK3Q96Q04 1460 aa20.04■□□□□ 0.8
UBXN11-204ENST00000374217 NRXN1Q9ULB1 1477 aa20.04■□□□□ 0.8
UBXN11-204ENST00000374217 TMEM2Q9UHN6 1383 aa20.04■□□□□ 0.8
UBXN11-204ENST00000374217 NBPF1Q3BBV0 1214 aa20.04■□□□□ 0.8
UBXN11-204ENST00000374217 CFAP70Q5T0N1 1121 aa20.03■□□□□ 0.8
UBXN11-204ENST00000374217 CEP170BQ9Y4F5 1589 aaPredicted RBP20.03■□□□□ 0.8
UBXN11-204ENST00000374217 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
UBXN11-204ENST00000374217 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
UBXN11-204ENST00000374217 EID1Q9Y6B2 187 aa20.02■□□□□ 0.8
UBXN11-204ENST00000374217 PIK3C2GO75747 1445 aa20.02■□□□□ 0.8
UBXN11-204ENST00000374217 NUDCQ9Y266 331 aa20.02■□□□□ 0.79
UBXN11-204ENST00000374217 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
UBXN11-204ENST00000374217 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
UBXN11-204ENST00000374217 CCDC184Q52MB2 194 aa19.99■□□□□ 0.79
UBXN11-204ENST00000374217 TXNDC2Q86VQ3 553 aa19.99■□□□□ 0.79
UBXN11-204ENST00000374217 C14orf93Q9H972 538 aaKnown RBP19.99■□□□□ 0.79
UBXN11-204ENST00000374217 GPRASP1Q5JY77 1395 aa19.99■□□□□ 0.79
UBXN11-204ENST00000374217 USP47Q96K76 1375 aa19.99■□□□□ 0.79
UBXN11-204ENST00000374217 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
UBXN11-204ENST00000374217 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
UBXN11-204ENST00000374217 USP35Q9P2H5 1018 aa19.96■□□□□ 0.79
UBXN11-204ENST00000374217 SLIT1O75093 1534 aa19.95■□□□□ 0.78
UBXN11-204ENST00000374217 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
UBXN11-204ENST00000374217 LAMC1P11047 1609 aa19.95■□□□□ 0.78
UBXN11-204ENST00000374217 KIF7Q2M1P5 1343 aa19.94■□□□□ 0.78
UBXN11-204ENST00000374217 PAK3O75914 559 aaPredicted RBP19.94■□□□□ 0.78
UBXN11-204ENST00000374217 ARHGAP23Q9P227 1491 aa19.93■□□□□ 0.78
UBXN11-204ENST00000374217 LTKP29376 864 aa19.93■□□□□ 0.78
UBXN11-204ENST00000374217 TMEM132EQ6IEE7 984 aa19.92■□□□□ 0.78
UBXN11-204ENST00000374217 ANKLE2Q86XL3 938 aa19.92■□□□□ 0.78
UBXN11-204ENST00000374217 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
UBXN11-204ENST00000374217 C11orf95C9JLR9 678 aaPredicted RBP19.91■□□□□ 0.78
UBXN11-204ENST00000374217 SCAF11Q99590 1463 aaKnown RBP19.91■□□□□ 0.78
UBXN11-204ENST00000374217 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
UBXN11-204ENST00000374217 NBR1Q14596 966 aa19.9■□□□□ 0.78
UBXN11-204ENST00000374217 EIF3AQ14152 1382 aaKnown RBP19.9■□□□□ 0.78
UBXN11-204ENST00000374217 KTN1Q86UP2 1357 aaKnown RBP19.9■□□□□ 0.78
UBXN11-204ENST00000374217 PLEKHG1Q9ULL1 1385 aa19.9■□□□□ 0.78
UBXN11-204ENST00000374217 ALKQ9UM73 1620 aa19.89■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms