RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 IQGAP1P46940 1657 aa27.34■■□□□ 1.97
SRSF4-201ENST00000373795 IRX6P78412 446 aaPredicted RBP27.33■■□□□ 1.97
SRSF4-201ENST00000373795 CAMSAP1Q5T5Y3 1602 aa27.32■■□□□ 1.96
SRSF4-201ENST00000373795 SIGLEC1Q9BZZ2 1709 aa27.32■■□□□ 1.96
SRSF4-201ENST00000373795 PER1O15534 1290 aaPredicted RBP27.31■■□□□ 1.96
SRSF4-201ENST00000373795 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
SRSF4-201ENST00000373795 MYOM2P54296 1465 aa27.3■■□□□ 1.96
SRSF4-201ENST00000373795 IFT172Q9UG01 1749 aa27.3■■□□□ 1.96
SRSF4-201ENST00000373795 NOS1P29475 1434 aa27.3■■□□□ 1.96
SRSF4-201ENST00000373795 ADGRB3O60242 1522 aa27.29■■□□□ 1.96
SRSF4-201ENST00000373795 PANK3Q9H999 370 aa27.29■■□□□ 1.96
SRSF4-201ENST00000373795 KIAA1210Q9ULL0 1709 aa27.26■■□□□ 1.96
SRSF4-201ENST00000373795 TMC1Q8TDI8 760 aa27.24■■□□□ 1.95
SRSF4-201ENST00000373795 RALBP1Q15311 655 aa27.24■■□□□ 1.95
SRSF4-201ENST00000373795 NUTM2DQ5VT03 806 aaPredicted RBP27.24■■□□□ 1.95
SRSF4-201ENST00000373795 RBM19Q9Y4C8 960 aaKnown RBP27.24■■□□□ 1.95
SRSF4-201ENST00000373795 ZMYM4Q5VZL5 1548 aa27.24■■□□□ 1.95
SRSF4-201ENST00000373795 NRXN1Q9ULB1 1477 aa27.23■■□□□ 1.95
SRSF4-201ENST00000373795 SYNMO15061 1565 aa27.22■■□□□ 1.95
SRSF4-201ENST00000373795 MYBBP1AQ9BQG0 1328 aaKnown RBP27.21■■□□□ 1.95
SRSF4-201ENST00000373795 IDI1Q13907 227 aa27.21■■□□□ 1.95
SRSF4-201ENST00000373795 CC2D1BQ5T0F9 858 aaKnown RBP27.21■■□□□ 1.95
SRSF4-201ENST00000373795 PNISRQ8TF01 805 aaKnown RBP27.21■■□□□ 1.95
SRSF4-201ENST00000373795 PPLO60437 1756 aa27.19■■□□□ 1.94
SRSF4-201ENST00000373795 ARHGAP31Q2M1Z3 1444 aa27.19■■□□□ 1.94
SRSF4-201ENST00000373795 KTN1Q86UP2 1357 aaKnown RBP27.19■■□□□ 1.94
SRSF4-201ENST00000373795 EIF3AQ14152 1382 aaKnown RBP27.18■■□□□ 1.94
SRSF4-201ENST00000373795 ZBED9Q6R2W3 1325 aa27.17■■□□□ 1.94
SRSF4-201ENST00000373795 ZC3H13Q5T200 1668 aaKnown RBP27.17■■□□□ 1.94
SRSF4-201ENST00000373795 SENP3-EIF4A1A0A087X0R7 540 aa27.17■■□□□ 1.94
SRSF4-201ENST00000373795 KIF13AQ9H1H9 1805 aa27.17■■□□□ 1.94
SRSF4-201ENST00000373795 FBXO31Q5XUX0 539 aaPredicted RBP27.16■■□□□ 1.94
SRSF4-201ENST00000373795 PIK3C2BO00750 1634 aa27.16■■□□□ 1.94
SRSF4-201ENST00000373795 PARD3Q8TEW0 1356 aa27.16■■□□□ 1.94
SRSF4-201ENST00000373795 TMEM132EQ6IEE7 984 aa27.16■■□□□ 1.94
SRSF4-201ENST00000373795 C14orf93Q9H972 538 aaKnown RBP27.16■■□□□ 1.94
SRSF4-201ENST00000373795 RPGRIP1LQ68CZ1 1315 aa27.15■■□□□ 1.94
SRSF4-201ENST00000373795 PIK3C2GO75747 1445 aa27.14■■□□□ 1.94
SRSF4-201ENST00000373795 CDCA8Q53HL2 280 aa27.13■■□□□ 1.93
SRSF4-201ENST00000373795 SENP3Q9H4L4 574 aaPredicted RBP27.13■■□□□ 1.93
SRSF4-201ENST00000373795 TRAK1Q9UPV9 953 aa27.13■■□□□ 1.93
SRSF4-201ENST00000373795 BRD4O60885 1362 aaPredicted RBP27.13■■□□□ 1.93
SRSF4-201ENST00000373795 MLECQ14165 292 aa27.11■■□□□ 1.93
SRSF4-201ENST00000373795 ANP32EQ9BTT0 268 aa27.11■■□□□ 1.93
SRSF4-201ENST00000373795 SLC52A1Q9NWF4 448 aa27.11■■□□□ 1.93
SRSF4-201ENST00000373795 NLRP13Q86W25 1043 aa27.09■■□□□ 1.93
SRSF4-201ENST00000373795 PREX1Q8TCU6 1659 aa27.08■■□□□ 1.93
SRSF4-201ENST00000373795 VGFO15240 615 aaPredicted RBP27.08■■□□□ 1.93
SRSF4-201ENST00000373795 ERVK-7P63135 1459 aa27.06■■□□□ 1.92
SRSF4-201ENST00000373795 KNSTRNQ9Y448 316 aa27.06■■□□□ 1.92
SRSF4-201ENST00000373795 NEXMIFQ5QGS0 1516 aa27.06■■□□□ 1.92
SRSF4-201ENST00000373795 SETBP1Q9Y6X0 1596 aa27.06■■□□□ 1.92
SRSF4-201ENST00000373795 MYO5BQ9ULV0 1848 aa27.05■■□□□ 1.92
SRSF4-201ENST00000373795 ERICH6BQ5W0A0 696 aa27.05■■□□□ 1.92
SRSF4-201ENST00000373795 ADGRB1O14514 1584 aa27.04■■□□□ 1.92
SRSF4-201ENST00000373795 CENPJQ9HC77 1338 aaPredicted RBP27.04■■□□□ 1.92
SRSF4-201ENST00000373795 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
SRSF4-201ENST00000373795 PPP4R2Q9NY27 417 aa27.03■■□□□ 1.92
SRSF4-201ENST00000373795 MYOM1P52179 1685 aa27.02■■□□□ 1.92
SRSF4-201ENST00000373795 REREQ9P2R6 1566 aa27.02■■□□□ 1.92
SRSF4-201ENST00000373795 AGLP35573 1532 aa27.02■■□□□ 1.92
SRSF4-201ENST00000373795 KDM5AP29375 1690 aaKnown RBP27.02■■□□□ 1.92
SRSF4-201ENST00000373795 AMER1Q5JTC6 1135 aaPredicted RBP27.01■■□□□ 1.91
SRSF4-201ENST00000373795 SLC24A1O60721 1099 aa27■■□□□ 1.91
SRSF4-201ENST00000373795 CLTCQ00610 1675 aaKnown RBP26.99■■□□□ 1.91
SRSF4-201ENST00000373795 TMEM131LA2VDJ0 1609 aa26.99■■□□□ 1.91
SRSF4-201ENST00000373795 MYO3AQ8NEV4 1616 aa26.98■■□□□ 1.91
SRSF4-201ENST00000373795 PPP6R1Q9UPN7 881 aa26.98■■□□□ 1.91
SRSF4-201ENST00000373795 SBNO2Q9Y2G9 1366 aa26.95■■□□□ 1.9
SRSF4-201ENST00000373795 STAG3Q9UJ98 1225 aa26.94■■□□□ 1.9
SRSF4-201ENST00000373795 B4GALNT3Q6L9W6 998 aa26.93■■□□□ 1.9
SRSF4-201ENST00000373795 CARD14Q9BXL6 1004 aa26.93■■□□□ 1.9
SRSF4-201ENST00000373795 QRICH2Q9H0J4 1663 aa26.92■■□□□ 1.9
SRSF4-201ENST00000373795 ARHGEF40Q8TER5 1519 aa26.92■■□□□ 1.9
SRSF4-201ENST00000373795 STK26Q9P289 416 aa26.92■■□□□ 1.9
SRSF4-201ENST00000373795 ZFYVE9O95405 1425 aa26.91■■□□□ 1.9
SRSF4-201ENST00000373795 PPP2R1AP30153 589 aa26.91■■□□□ 1.9
SRSF4-201ENST00000373795 ASXL1Q8IXJ9 1541 aa26.91■■□□□ 1.9
SRSF4-201ENST00000373795 SALL2Q9Y467 1007 aaPredicted RBP26.91■■□□□ 1.9
SRSF4-201ENST00000373795 SMG6Q86US8 1419 aaKnown RBP26.9■■□□□ 1.9
SRSF4-201ENST00000373795 SAFB2Q14151 953 aaKnown RBP eCLIP26.9■■□□□ 1.94e-8■□□□□ 11.1
SRSF4-201ENST00000373795 SLC12A5Q9H2X9 1139 aa26.88■■□□□ 1.89
SRSF4-201ENST00000373795 NUDCQ9Y266 331 aa26.86■■□□□ 1.89
SRSF4-201ENST00000373795 ESF1Q9H501 851 aaKnown RBP26.85■■□□□ 1.89
SRSF4-201ENST00000373795 ARHGEF28Q8N1W1 1705 aaKnown RBP26.85■■□□□ 1.89
SRSF4-201ENST00000373795 MSH5O43196 834 aa26.84■■□□□ 1.89
SRSF4-201ENST00000373795 ZMYM3Q14202 1370 aa26.83■■□□□ 1.89
SRSF4-201ENST00000373795 SPATA31D1Q6ZQQ2 1576 aa26.82■■□□□ 1.88
SRSF4-201ENST00000373795 NPC1L1Q9UHC9 1359 aa26.82■■□□□ 1.88
SRSF4-201ENST00000373795 ADAMTS8Q9UP79 889 aa26.8■■□□□ 1.88
SRSF4-201ENST00000373795 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
SRSF4-201ENST00000373795 CABP2Q9NPB3 220 aa26.79■■□□□ 1.88
SRSF4-201ENST00000373795 EVC2Q86UK5 1308 aa26.78■■□□□ 1.88
SRSF4-201ENST00000373795 FANCIQ9NVI1 1328 aa26.78■■□□□ 1.88
SRSF4-201ENST00000373795 TULP4Q9NRJ4 1543 aa26.76■■□□□ 1.87
SRSF4-201ENST00000373795 PRAM1Q96QH2 718 aa26.76■■□□□ 1.87
SRSF4-201ENST00000373795 ALKQ9UM73 1620 aa26.75■■□□□ 1.87
SRSF4-201ENST00000373795 YTHDC2Q9H6S0 1430 aaKnown RBP26.74■■□□□ 1.87
SRSF4-201ENST00000373795 RNF123Q5XPI4 1314 aa26.74■■□□□ 1.87
SRSF4-201ENST00000373795 NSD3Q9BZ95 1437 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms