RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 SEPT6Q14141 434 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 MAP9Q49MG5 647 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 H3BQV1 296 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 KCNH8Q96L42 1107 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 LIG1P18858 919 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 ANKRD18AQ8IVF6 992 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 SLC26A8Q96RN1 970 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 CARD11Q9BXL7 1154 aa8.48□□□□□ -1.05
CSMD2-206ENST00000373388 GBP3Q9H0R5 595 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 NF2P35240 595 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 FAM114A1Q8IWE2 563 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 ZNF526Q8TF50 670 aaPredicted RBP8.47□□□□□ -1.05
CSMD2-206ENST00000373388 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
CSMD2-206ENST00000373388 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
CSMD2-206ENST00000373388 CT47A1Q5JQC4 288 aaPredicted RBP8.47□□□□□ -1.05
CSMD2-206ENST00000373388 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 KIF20AO95235 890 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 RASSF8Q8NHQ8 419 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 FYB1O15117 783 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.47□□□□□ -1.05
CSMD2-206ENST00000373388 SASS6Q6UVJ0 657 aa8.47□□□□□ -1.05
CSMD2-206ENST00000373388 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.05
CSMD2-206ENST00000373388 ITPRIPQ8IWB1 547 aa8.46□□□□□ -1.05
CSMD2-206ENST00000373388 RBM10P98175 930 aaKnown RBP8.46□□□□□ -1.06
CSMD2-206ENST00000373388 GPATCH11Q8N954 259 aa8.46□□□□□ -1.06
CSMD2-206ENST00000373388 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
CSMD2-206ENST00000373388 ERICH4A6NGS2 130 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 GOLGA6L9A6NEM1 432 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 TSPY26PQ9H489 355 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 GRPEL1Q9HAV7 217 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 CCDC73Q6ZRK6 1079 aa8.45□□□□□ -1.06
CSMD2-206ENST00000373388 NPM1P06748 294 aaKnown RBP eCLIP8.45□□□□□ -1.06
CSMD2-206ENST00000373388 MNAT1P51948 309 aa8.44□□□□□ -1.06
CSMD2-206ENST00000373388 PRIMPOLQ96LW4 560 aa8.44□□□□□ -1.06
CSMD2-206ENST00000373388 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
CSMD2-206ENST00000373388 LUC7LQ9NQ29 371 aaKnown RBP8.44□□□□□ -1.06
CSMD2-206ENST00000373388 APBB1O00213 710 aa8.44□□□□□ -1.06
CSMD2-206ENST00000373388 KIF3BO15066 747 aa8.44□□□□□ -1.06
CSMD2-206ENST00000373388 SH3BGRP55822 239 aaPredicted RBP8.44□□□□□ -1.06
CSMD2-206ENST00000373388 DNAAF4Q8WXU2 420 aa8.44□□□□□ -1.06
CSMD2-206ENST00000373388 MRVI1Q9Y6F6 885 aa8.44□□□□□ -1.06
CSMD2-206ENST00000373388 CENPJQ9HC77 1338 aaPredicted RBP8.44□□□□□ -1.06
CSMD2-206ENST00000373388 PIP4K2AP48426 406 aaPredicted RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 PSMD1Q99460 953 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 TRAK2O60296 914 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 MAPK8IP2Q13387 824 aaPredicted RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 TRIM5Q9C035 493 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 POTEB2H3BUK9 544 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 SUDS3Q9H7L9 328 aaPredicted RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 CEP164Q9UPV0 1460 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 SMARCE1Q969G3 411 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 MPHOSPH10O00566 681 aaKnown RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 TMCO3Q6UWJ1 677 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 RBM33Q96EV2 1170 aaKnown RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 CCDC47Q96A33 483 aaKnown RBP8.43□□□□□ -1.06
CSMD2-206ENST00000373388 MIPOL1Q8TD10 442 aa8.43□□□□□ -1.06
CSMD2-206ENST00000373388 SMAP1Q8IYB5 467 aaPredicted RBP8.42□□□□□ -1.06
CSMD2-206ENST00000373388 CFAP57Q96MR6 1250 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 PRM3Q9NNZ6 103 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 CIZ1Q9ULV3 898 aaPredicted RBP8.42□□□□□ -1.06
CSMD2-206ENST00000373388 TMF1P82094 1093 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
CSMD2-206ENST00000373388 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 PDCP20941 246 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 TMX4Q9H1E5 349 aaPredicted RBP8.42□□□□□ -1.06
CSMD2-206ENST00000373388 RRP1P56182 461 aaKnown RBP8.42□□□□□ -1.06
CSMD2-206ENST00000373388 RNF168Q8IYW5 571 aaPredicted RBP8.42□□□□□ -1.06
CSMD2-206ENST00000373388 TNIKQ9UKE5 1360 aa8.42□□□□□ -1.06
CSMD2-206ENST00000373388 LMOD3Q0VAK6 560 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 CCDC192P0DO97 292 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 MCM2P49736 904 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 NCBP3Q53F19 620 aaKnown RBP8.41□□□□□ -1.06
CSMD2-206ENST00000373388 KRT222Q8N1A0 295 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 BICD2Q8TD16 824 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 UBXN4Q92575 508 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 ROCK1Q13464 1354 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 ZHX1Q9UKY1 873 aaPredicted RBP8.41□□□□□ -1.06
CSMD2-206ENST00000373388 A0A1B0GUA9 196 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 CENPHQ9H3R5 247 aa8.41□□□□□ -1.06
CSMD2-206ENST00000373388 CREBRFQ8IUR6 639 aa8.4□□□□□ -1.06
CSMD2-206ENST00000373388 SOX12O15370 315 aa8.4□□□□□ -1.06
CSMD2-206ENST00000373388 FEZ1Q99689 392 aa8.4□□□□□ -1.06
CSMD2-206ENST00000373388 FILIP1Q7Z7B0 1213 aa8.4□□□□□ -1.06
CSMD2-206ENST00000373388 TRIM6-TRIM34B2RNG4 842 aa8.4□□□□□ -1.06
CSMD2-206ENST00000373388 CHMP7Q8WUX9 453 aaPredicted RBP8.4□□□□□ -1.07
CSMD2-206ENST00000373388 KIF15Q9NS87 1388 aa8.4□□□□□ -1.07
CSMD2-206ENST00000373388 ZKSCAN1P17029 563 aaPredicted RBP8.4□□□□□ -1.07
CSMD2-206ENST00000373388 AKAP17AQ02040 695 aaKnown RBP8.4□□□□□ -1.07
CSMD2-206ENST00000373388 LRRFIP1Q32MZ4 808 aaKnown RBP8.4□□□□□ -1.07
CSMD2-206ENST00000373388 LMOD2Q6P5Q4 547 aa8.4□□□□□ -1.07
CSMD2-206ENST00000373388 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.07
CSMD2-206ENST00000373388 ZNF622Q969S3 477 aaKnown RBP eCLIP8.4□□□□□ -1.07
CSMD2-206ENST00000373388 OLFM4Q6UX06 510 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms