RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 RCAN3Q9UKA8 241 aa31.83■■■□□ 2.69
CDK9-201ENST00000373264 EFCAB6Q5THR3 1501 aa31.83■■■□□ 2.69
CDK9-201ENST00000373264 PPP2R1AP30153 589 aa31.83■■■□□ 2.69
CDK9-201ENST00000373264 GGT6Q6P531 493 aa31.83■■■□□ 2.69
CDK9-201ENST00000373264 MROH2AA6NES4 1674 aa31.83■■■□□ 2.69
CDK9-201ENST00000373264 RRP1P56182 461 aaKnown RBP31.82■■■□□ 2.68
CDK9-201ENST00000373264 ABCA6Q8N139 1617 aa31.81■■■□□ 2.68
CDK9-201ENST00000373264 ZNF518AQ6AHZ1 1483 aa31.81■■■□□ 2.68
CDK9-201ENST00000373264 BLMP54132 1417 aaPredicted RBP31.8■■■□□ 2.68
CDK9-201ENST00000373264 CD109Q6YHK3 1445 aa31.8■■■□□ 2.68
CDK9-201ENST00000373264 MYT1Q01538 1121 aa31.79■■■□□ 2.68
CDK9-201ENST00000373264 MYOM1P52179 1685 aa31.79■■■□□ 2.68
CDK9-201ENST00000373264 EXOC6Q8TAG9 804 aa31.78■■■□□ 2.68
CDK9-201ENST00000373264 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
CDK9-201ENST00000373264 STAC3Q96MF2 364 aa31.77■■■□□ 2.68
CDK9-201ENST00000373264 KIF1BO60333 1816 aa31.76■■■□□ 2.67
CDK9-201ENST00000373264 SYNMO15061 1565 aa31.75■■■□□ 2.67
CDK9-201ENST00000373264 FRMPD1Q5SYB0 1578 aa31.74■■■□□ 2.67
CDK9-201ENST00000373264 PLIN1O60240 522 aa31.74■■■□□ 2.67
CDK9-201ENST00000373264 RAPGEF3O95398 923 aa31.74■■■□□ 2.67
CDK9-201ENST00000373264 FANCIQ9NVI1 1328 aa31.73■■■□□ 2.67
CDK9-201ENST00000373264 CDCA8Q53HL2 280 aa31.73■■■□□ 2.67
CDK9-201ENST00000373264 NOS1P29475 1434 aa31.73■■■□□ 2.67
CDK9-201ENST00000373264 POGZQ7Z3K3 1410 aa31.73■■■□□ 2.67
CDK9-201ENST00000373264 EIF3AQ14152 1382 aaKnown RBP31.72■■■□□ 2.67
CDK9-201ENST00000373264 PDE3BQ13370 1112 aa31.71■■■□□ 2.67
CDK9-201ENST00000373264 MYOM2P54296 1465 aa31.71■■■□□ 2.67
CDK9-201ENST00000373264 NPATQ14207 1427 aa31.71■■■□□ 2.67
CDK9-201ENST00000373264 ERVK-7P63135 1459 aa31.71■■■□□ 2.67
CDK9-201ENST00000373264 KIAA1210Q9ULL0 1709 aa31.7■■■□□ 2.67
CDK9-201ENST00000373264 IFT172Q9UG01 1749 aa31.69■■■□□ 2.66
CDK9-201ENST00000373264 ASXL1Q8IXJ9 1541 aa31.69■■■□□ 2.66
CDK9-201ENST00000373264 NUTM2DQ5VT03 806 aaPredicted RBP31.68■■■□□ 2.66
CDK9-201ENST00000373264 CARD14Q9BXL6 1004 aa31.68■■■□□ 2.66
CDK9-201ENST00000373264 KDM5AP29375 1690 aaKnown RBP31.66■■■□□ 2.66
CDK9-201ENST00000373264 NEURL4Q96JN8 1562 aa31.66■■■□□ 2.66
CDK9-201ENST00000373264 PLEKHH1Q9ULM0 1364 aa31.66■■■□□ 2.66
CDK9-201ENST00000373264 LMTK2Q8IWU2 1503 aa31.65■■■□□ 2.66
CDK9-201ENST00000373264 TMEM132EQ6IEE7 984 aa31.65■■■□□ 2.66
CDK9-201ENST00000373264 SENP3Q9H4L4 574 aaPredicted RBP31.65■■■□□ 2.66
CDK9-201ENST00000373264 TRAK1Q9UPV9 953 aa31.65■■■□□ 2.66
CDK9-201ENST00000373264 WDR43Q15061 677 aaKnown RBP eCLIP31.65■■■□□ 2.66
CDK9-201ENST00000373264 ZMYM4Q5VZL5 1548 aa31.63■■■□□ 2.65
CDK9-201ENST00000373264 CCDC146Q8IYE0 955 aa31.63■■■□□ 2.65
CDK9-201ENST00000373264 ADGRB3O60242 1522 aa31.62■■■□□ 2.65
CDK9-201ENST00000373264 MLH3Q9UHC1 1453 aa31.61■■■□□ 2.65
CDK9-201ENST00000373264 NRXN1Q9ULB1 1477 aa31.61■■■□□ 2.65
CDK9-201ENST00000373264 HECW2Q9P2P5 1572 aa31.6■■■□□ 2.65
CDK9-201ENST00000373264 INSRP06213 1382 aa31.59■■■□□ 2.65
CDK9-201ENST00000373264 C20orf194Q5TEA3 1177 aa31.54■■■□□ 2.64
CDK9-201ENST00000373264 CENPJQ9HC77 1338 aaPredicted RBP31.54■■■□□ 2.64
CDK9-201ENST00000373264 ABCC3O15438 1527 aa31.54■■■□□ 2.64
CDK9-201ENST00000373264 PIK3C2GO75747 1445 aa31.53■■■□□ 2.64
CDK9-201ENST00000373264 SIGLEC1Q9BZZ2 1709 aa31.53■■■□□ 2.64
CDK9-201ENST00000373264 CFAP74Q9C0B2 1584 aa31.53■■■□□ 2.64
CDK9-201ENST00000373264 PPLO60437 1756 aa31.51■■■□□ 2.64
CDK9-201ENST00000373264 CRBNQ96SW2 442 aa31.51■■■□□ 2.64
CDK9-201ENST00000373264 C14orf93Q9H972 538 aaKnown RBP31.51■■■□□ 2.64
CDK9-201ENST00000373264 SLC12A5Q9H2X9 1139 aa31.5■■■□□ 2.63
CDK9-201ENST00000373264 NPC1L1Q9UHC9 1359 aa31.5■■■□□ 2.63
CDK9-201ENST00000373264 DUSP27Q5VZP5 1158 aa31.5■■■□□ 2.63
CDK9-201ENST00000373264 SKAP1Q86WV1 359 aa31.5■■■□□ 2.63
CDK9-201ENST00000373264 ZNF521Q96K83 1311 aa31.48■■■□□ 2.63
CDK9-201ENST00000373264 TNNT2P45379 298 aaPredicted RBP31.48■■■□□ 2.63
CDK9-201ENST00000373264 SPINK5Q9NQ38 1064 aaPredicted RBP31.47■■■□□ 2.63
CDK9-201ENST00000373264 APAF1O14727 1248 aa31.47■■■□□ 2.63
CDK9-201ENST00000373264 MYO3AQ8NEV4 1616 aa31.46■■■□□ 2.63
CDK9-201ENST00000373264 ADGRB1O14514 1584 aa31.46■■■□□ 2.63
CDK9-201ENST00000373264 CAMSAP1Q5T5Y3 1602 aa31.44■■■□□ 2.62
CDK9-201ENST00000373264 YEATS2Q9ULM3 1422 aa31.43■■■□□ 2.62
CDK9-201ENST00000373264 DIP2CQ9Y2E4 1556 aa31.42■■■□□ 2.62
CDK9-201ENST00000373264 SETBP1Q9Y6X0 1596 aa31.42■■■□□ 2.62
CDK9-201ENST00000373264 GOLGA2Q08379 1002 aa31.42■■■□□ 2.62
CDK9-201ENST00000373264 DMRT2Q9Y5R5 561 aa31.41■■■□□ 2.62
CDK9-201ENST00000373264 QRICH2Q9H0J4 1663 aa31.41■■■□□ 2.62
CDK9-201ENST00000373264 SBNO2Q9Y2G9 1366 aa31.41■■■□□ 2.62
CDK9-201ENST00000373264 NSD3Q9BZ95 1437 aa31.41■■■□□ 2.62
CDK9-201ENST00000373264 SAFB2Q14151 953 aaKnown RBP eCLIP31.4■■■□□ 2.62
CDK9-201ENST00000373264 NEO1Q92859 1461 aa31.38■■■□□ 2.61
CDK9-201ENST00000373264 IDI1Q13907 227 aa31.38■■■□□ 2.61
CDK9-201ENST00000373264 ERICH6Q7L0X2 663 aa31.38■■■□□ 2.61
CDK9-201ENST00000373264 CYB5RLQ6IPT4 315 aa31.37■■■□□ 2.61
CDK9-201ENST00000373264 ZC3H13Q5T200 1668 aaKnown RBP31.37■■■□□ 2.61
CDK9-201ENST00000373264 SLC24A1O60721 1099 aa31.36■■■□□ 2.61
CDK9-201ENST00000373264 SLFN5Q08AF3 891 aa31.36■■■□□ 2.61
CDK9-201ENST00000373264 PAK3O75914 559 aaPredicted RBP31.33■■■□□ 2.61
CDK9-201ENST00000373264 RPGRIP1LQ68CZ1 1315 aa31.33■■■□□ 2.61
CDK9-201ENST00000373264 RICTORQ6R327 1708 aa31.33■■■□□ 2.61
CDK9-201ENST00000373264 MORC1Q86VD1 984 aa31.32■■■□□ 2.6
CDK9-201ENST00000373264 NEXMIFQ5QGS0 1516 aa31.31■■■□□ 2.6
CDK9-201ENST00000373264 STK26Q9P289 416 aa31.31■■■□□ 2.6
CDK9-201ENST00000373264 GLI2P10070 1586 aa31.31■■■□□ 2.6
CDK9-201ENST00000373264 PIK3C2BO00750 1634 aa31.31■■■□□ 2.6
CDK9-201ENST00000373264 CABP2Q9NPB3 220 aa31.29■■■□□ 2.6
CDK9-201ENST00000373264 VGFO15240 615 aaPredicted RBP31.27■■■□□ 2.6
CDK9-201ENST00000373264 TRMT2AQ8IZ69 625 aaKnown RBP31.27■■■□□ 2.6
CDK9-201ENST00000373264 FBXO31Q5XUX0 539 aaPredicted RBP31.26■■■□□ 2.6
CDK9-201ENST00000373264 NEUROD2Q15784 382 aa31.25■■■□□ 2.59
CDK9-201ENST00000373264 RRP7AQ9Y3A4 280 aaKnown RBP31.25■■■□□ 2.59
CDK9-201ENST00000373264 BCAR3O75815 825 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms