RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
LCN2-202ENST00000372998 CNGB1Q14028 1251 aaPredicted RBP14.32□□□□□ -0.12
LCN2-202ENST00000372998 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
LCN2-202ENST00000372998 SPAG9O60271 1321 aaKnown RBP14.32□□□□□ -0.12
LCN2-202ENST00000372998 MYOM2P54296 1465 aa14.31□□□□□ -0.12
LCN2-202ENST00000372998 ZFYVE16Q7Z3T8 1539 aa14.31□□□□□ -0.12
LCN2-202ENST00000372998 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
LCN2-202ENST00000372998 KIF1BO60333 1816 aa14.31□□□□□ -0.12
LCN2-202ENST00000372998 PPM1GO15355 546 aaPredicted RBP14.3□□□□□ -0.12
LCN2-202ENST00000372998 EXOC6Q8TAG9 804 aa14.3□□□□□ -0.12
LCN2-202ENST00000372998 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
LCN2-202ENST00000372998 NINLQ9Y2I6 1382 aa14.29□□□□□ -0.12
LCN2-202ENST00000372998 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
LCN2-202ENST00000372998 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
LCN2-202ENST00000372998 CLTCL1P53675 1640 aa14.27□□□□□ -0.12
LCN2-202ENST00000372998 ATP7AQ04656 1500 aa14.27□□□□□ -0.12
LCN2-202ENST00000372998 PDE4AP27815 886 aa14.27□□□□□ -0.13
LCN2-202ENST00000372998 CC2D1BQ5T0F9 858 aaKnown RBP14.27□□□□□ -0.13
LCN2-202ENST00000372998 BACH2Q9BYV9 841 aa14.27□□□□□ -0.13
LCN2-202ENST00000372998 MYO3AQ8NEV4 1616 aa14.26□□□□□ -0.13
LCN2-202ENST00000372998 MAP3K4Q9Y6R4 1608 aa14.26□□□□□ -0.13
LCN2-202ENST00000372998 SBNO2Q9Y2G9 1366 aa14.26□□□□□ -0.13
LCN2-202ENST00000372998 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
LCN2-202ENST00000372998 AAMPQ13685 434 aa14.26□□□□□ -0.13
LCN2-202ENST00000372998 MYOM1P52179 1685 aa14.26□□□□□ -0.13
LCN2-202ENST00000372998 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
LCN2-202ENST00000372998 DEKP35659 375 aaKnown RBP14.25□□□□□ -0.13
LCN2-202ENST00000372998 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
LCN2-202ENST00000372998 TRAPPC8Q9Y2L5 1435 aa14.24□□□□□ -0.13
LCN2-202ENST00000372998 IFT172Q9UG01 1749 aa14.24□□□□□ -0.13
LCN2-202ENST00000372998 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
LCN2-202ENST00000372998 LMTK2Q8IWU2 1503 aa14.23□□□□□ -0.13
LCN2-202ENST00000372998 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
LCN2-202ENST00000372998 AMER1Q5JTC6 1135 aaPredicted RBP14.22□□□□□ -0.13
LCN2-202ENST00000372998 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
LCN2-202ENST00000372998 E9PSI1 815 aa14.2□□□□□ -0.14
LCN2-202ENST00000372998 ADAMTS8Q9UP79 889 aa14.2□□□□□ -0.14
LCN2-202ENST00000372998 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
LCN2-202ENST00000372998 FANCAO15360 1455 aa14.19□□□□□ -0.14
LCN2-202ENST00000372998 NKTRP30414 1462 aaKnown RBP14.19□□□□□ -0.14
LCN2-202ENST00000372998 ERCC6L2Q5T890 1561 aa14.19□□□□□ -0.14
LCN2-202ENST00000372998 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
LCN2-202ENST00000372998 CDCA7LQ96GN5 454 aa14.19□□□□□ -0.14
LCN2-202ENST00000372998 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
LCN2-202ENST00000372998 CRBNQ96SW2 442 aa14.19□□□□□ -0.14
LCN2-202ENST00000372998 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
LCN2-202ENST00000372998 SLFN5Q08AF3 891 aa14.18□□□□□ -0.14
LCN2-202ENST00000372998 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
LCN2-202ENST00000372998 ABCA6Q8N139 1617 aa14.18□□□□□ -0.14
LCN2-202ENST00000372998 USP32Q8NFA0 1604 aa14.18□□□□□ -0.14
LCN2-202ENST00000372998 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
LCN2-202ENST00000372998 TRMT2AQ8IZ69 625 aaKnown RBP14.17□□□□□ -0.14
LCN2-202ENST00000372998 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
LCN2-202ENST00000372998 POLR3AO14802 1390 aaPredicted RBP14.17□□□□□ -0.14
LCN2-202ENST00000372998 RPGRIP1LQ68CZ1 1315 aa14.16□□□□□ -0.14
LCN2-202ENST00000372998 KDM2BQ8NHM5 1336 aa14.16□□□□□ -0.14
LCN2-202ENST00000372998 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.14
LCN2-202ENST00000372998 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
LCN2-202ENST00000372998 ZMYM3Q14202 1370 aa14.15□□□□□ -0.14
LCN2-202ENST00000372998 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
LCN2-202ENST00000372998 FAM161AQ3B820 660 aa14.15□□□□□ -0.14
LCN2-202ENST00000372998 VIRMAQ69YN4 1812 aaKnown RBP14.15□□□□□ -0.14
LCN2-202ENST00000372998 NBR1Q14596 966 aa14.14□□□□□ -0.15
LCN2-202ENST00000372998 MROH1Q8NDA8 1641 aa14.14□□□□□ -0.15
LCN2-202ENST00000372998 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
LCN2-202ENST00000372998 ZNF518AQ6AHZ1 1483 aa14.13□□□□□ -0.15
LCN2-202ENST00000372998 PLEKHH1Q9ULM0 1364 aa14.13□□□□□ -0.15
LCN2-202ENST00000372998 ADGRB3O60242 1522 aa14.13□□□□□ -0.15
LCN2-202ENST00000372998 ZC3H13Q5T200 1668 aaKnown RBP14.13□□□□□ -0.15
LCN2-202ENST00000372998 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
LCN2-202ENST00000372998 NSD2O96028 1365 aa14.11□□□□□ -0.15
LCN2-202ENST00000372998 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
LCN2-202ENST00000372998 PPLO60437 1756 aa14.11□□□□□ -0.15
LCN2-202ENST00000372998 KIF3BO15066 747 aa14.1□□□□□ -0.15
LCN2-202ENST00000372998 KIDINS220Q9ULH0 1771 aa14.09□□□□□ -0.15
LCN2-202ENST00000372998 AFAP1Q8N556 730 aa14.09□□□□□ -0.15
LCN2-202ENST00000372998 CFAP53Q96M91 514 aa14.09□□□□□ -0.15
LCN2-202ENST00000372998 PPRC1Q5VV67 1664 aaKnown RBP14.09□□□□□ -0.15
LCN2-202ENST00000372998 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
LCN2-202ENST00000372998 QRICH2Q9H0J4 1663 aa14.08□□□□□ -0.16
LCN2-202ENST00000372998 PLIN1O60240 522 aa14.08□□□□□ -0.16
LCN2-202ENST00000372998 NEFMP07197 916 aa14.07□□□□□ -0.16
LCN2-202ENST00000372998 AEBP2Q6ZN18 517 aaPredicted RBP14.07□□□□□ -0.16
LCN2-202ENST00000372998 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
LCN2-202ENST00000372998 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
LCN2-202ENST00000372998 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
LCN2-202ENST00000372998 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
LCN2-202ENST00000372998 CCDC27Q2M243 656 aa14.06□□□□□ -0.16
LCN2-202ENST00000372998 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
LCN2-202ENST00000372998 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
LCN2-202ENST00000372998 APAF1O14727 1248 aa14.04□□□□□ -0.16
LCN2-202ENST00000372998 HECW2Q9P2P5 1572 aa14.04□□□□□ -0.16
LCN2-202ENST00000372998 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
LCN2-202ENST00000372998 CANXP27824 592 aaKnown RBP14.03□□□□□ -0.16
LCN2-202ENST00000372998 CFAP70Q5T0N1 1121 aa14.03□□□□□ -0.16
LCN2-202ENST00000372998 MORC1Q86VD1 984 aa14.03□□□□□ -0.16
LCN2-202ENST00000372998 C14orf93Q9H972 538 aaKnown RBP14.03□□□□□ -0.16
LCN2-202ENST00000372998 SHPRHQ149N8 1683 aa14.03□□□□□ -0.16
LCN2-202ENST00000372998 ASXL2Q76L83 1435 aa14.02□□□□□ -0.16
LCN2-202ENST00000372998 NPM1P06748 294 aaKnown RBP eCLIP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms