RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 TET3O43151 1660 aa18.69■□□□□ 0.58
CHCHD1-202ENST00000372837 SHPRHQ149N8 1683 aa18.69■□□□□ 0.58
CHCHD1-202ENST00000372837 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
CHCHD1-202ENST00000372837 NWD1Q149M9 1564 aa18.68■□□□□ 0.58
CHCHD1-202ENST00000372837 CAMSAP2Q08AD1 1489 aa18.66■□□□□ 0.58
CHCHD1-202ENST00000372837 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
CHCHD1-202ENST00000372837 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
CHCHD1-202ENST00000372837 AHDC1Q5TGY3 1603 aaPredicted RBP18.65■□□□□ 0.58
CHCHD1-202ENST00000372837 FOXD1Q16676 465 aa18.65■□□□□ 0.58
CHCHD1-202ENST00000372837 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
CHCHD1-202ENST00000372837 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
CHCHD1-202ENST00000372837 MROH1Q8NDA8 1641 aa18.63■□□□□ 0.57
CHCHD1-202ENST00000372837 PIK3C2BO00750 1634 aa18.63■□□□□ 0.57
CHCHD1-202ENST00000372837 KDM5AP29375 1690 aaKnown RBP18.63■□□□□ 0.57
CHCHD1-202ENST00000372837 ATAD2Q6PL18 1390 aa18.62■□□□□ 0.57
CHCHD1-202ENST00000372837 DIP2AQ14689 1571 aa18.62■□□□□ 0.57
CHCHD1-202ENST00000372837 CEP152O94986 1710 aa18.61■□□□□ 0.57
CHCHD1-202ENST00000372837 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
CHCHD1-202ENST00000372837 ARHGAP31Q2M1Z3 1444 aa18.59■□□□□ 0.57
CHCHD1-202ENST00000372837 TSPY4P0CV99 314 aa18.58■□□□□ 0.56
CHCHD1-202ENST00000372837 TSPY10P0CW01 314 aa18.58■□□□□ 0.56
CHCHD1-202ENST00000372837 EFCAB6Q5THR3 1501 aa18.58■□□□□ 0.56
CHCHD1-202ENST00000372837 C8orf37Q96NL8 207 aa18.57■□□□□ 0.56
CHCHD1-202ENST00000372837 IDI1Q13907 227 aa18.55■□□□□ 0.56
CHCHD1-202ENST00000372837 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
CHCHD1-202ENST00000372837 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 BCANQ96GW7 911 aa18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 MAST1Q9Y2H9 1570 aa18.54■□□□□ 0.56
CHCHD1-202ENST00000372837 NGLY1Q96IV0 654 aa18.53■□□□□ 0.56
CHCHD1-202ENST00000372837 EHBP1L1Q8N3D4 1523 aa18.53■□□□□ 0.56
CHCHD1-202ENST00000372837 C14orf37Q86TY3 774 aa18.52■□□□□ 0.56
CHCHD1-202ENST00000372837 EP400Q96L91 3159 aa18.51■□□□□ 0.55
CHCHD1-202ENST00000372837 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
CHCHD1-202ENST00000372837 ATF3P18847 181 aa18.51■□□□□ 0.55
CHCHD1-202ENST00000372837 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
CHCHD1-202ENST00000372837 CHD2O14647 1828 aaKnown RBP18.5■□□□□ 0.55
CHCHD1-202ENST00000372837 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
CHCHD1-202ENST00000372837 CCDC125Q86Z20 511 aa18.48■□□□□ 0.55
CHCHD1-202ENST00000372837 MIER1Q8N108 512 aa18.45■□□□□ 0.54
CHCHD1-202ENST00000372837 LRRC59Q96AG4 307 aaKnown RBP18.45■□□□□ 0.54
CHCHD1-202ENST00000372837 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
CHCHD1-202ENST00000372837 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
CHCHD1-202ENST00000372837 LRP5O75197 1615 aa18.44■□□□□ 0.54
CHCHD1-202ENST00000372837 ASXL1Q8IXJ9 1541 aa18.44■□□□□ 0.54
CHCHD1-202ENST00000372837 ADAMTS2O95450 1211 aa18.43■□□□□ 0.54
CHCHD1-202ENST00000372837 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
CHCHD1-202ENST00000372837 TBX22Q9Y458 520 aa18.42■□□□□ 0.54
CHCHD1-202ENST00000372837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHCHD1-202ENST00000372837 USP21Q9UK80 565 aa18.41■□□□□ 0.54
CHCHD1-202ENST00000372837 TRPC5Q9UL62 973 aaPredicted RBP18.41■□□□□ 0.54
CHCHD1-202ENST00000372837 ZFYVE9O95405 1425 aa18.4■□□□□ 0.54
CHCHD1-202ENST00000372837 DUOX2Q9NRD8 1548 aa18.4■□□□□ 0.54
CHCHD1-202ENST00000372837 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
CHCHD1-202ENST00000372837 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
CHCHD1-202ENST00000372837 NOS1P29475 1434 aa18.38■□□□□ 0.53
CHCHD1-202ENST00000372837 ATRNO75882 1429 aa18.37■□□□□ 0.53
CHCHD1-202ENST00000372837 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
CHCHD1-202ENST00000372837 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
CHCHD1-202ENST00000372837 FNBP4Q8N3X1 1017 aaPredicted RBP18.36■□□□□ 0.53
CHCHD1-202ENST00000372837 MST1RQ04912 1400 aa18.35■□□□□ 0.53
CHCHD1-202ENST00000372837 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
CHCHD1-202ENST00000372837 RIMS2Q9UQ26 1411 aa18.35■□□□□ 0.53
CHCHD1-202ENST00000372837 DHX57Q6P158 1386 aaKnown RBP18.35■□□□□ 0.53
CHCHD1-202ENST00000372837 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
CHCHD1-202ENST00000372837 DCCP43146 1447 aa18.34■□□□□ 0.53
CHCHD1-202ENST00000372837 BLMP54132 1417 aaPredicted RBP18.33■□□□□ 0.53
CHCHD1-202ENST00000372837 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
CHCHD1-202ENST00000372837 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.52
CHCHD1-202ENST00000372837 ERBINQ96RT1 1412 aa18.32■□□□□ 0.52
CHCHD1-202ENST00000372837 KANK1Q14678 1352 aa18.32■□□□□ 0.52
CHCHD1-202ENST00000372837 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
CHCHD1-202ENST00000372837 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
CHCHD1-202ENST00000372837 AMOTL2Q9Y2J4 779 aa18.31■□□□□ 0.52
CHCHD1-202ENST00000372837 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
CHCHD1-202ENST00000372837 PTPRUQ92729 1446 aa18.3■□□□□ 0.52
CHCHD1-202ENST00000372837 RRP7BPQ9NSQ0 103 aa18.29■□□□□ 0.52
CHCHD1-202ENST00000372837 PSDA5PKW4 1024 aaPredicted RBP18.28■□□□□ 0.52
CHCHD1-202ENST00000372837 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
CHCHD1-202ENST00000372837 TIMELESSQ9UNS1 1208 aa18.26■□□□□ 0.51
CHCHD1-202ENST00000372837 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
CHCHD1-202ENST00000372837 MYO5BQ9ULV0 1848 aa18.26■□□□□ 0.51
CHCHD1-202ENST00000372837 YY1P25490 414 aa18.25■□□□□ 0.51
CHCHD1-202ENST00000372837 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
CHCHD1-202ENST00000372837 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHCHD1-202ENST00000372837 TRPM2O94759 1503 aa18.23■□□□□ 0.51
CHCHD1-202ENST00000372837 TMEM131LA2VDJ0 1609 aa18.22■□□□□ 0.51
CHCHD1-202ENST00000372837 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
CHCHD1-202ENST00000372837 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
CHCHD1-202ENST00000372837 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
CHCHD1-202ENST00000372837 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
CHCHD1-202ENST00000372837 SOS2Q07890 1332 aaPredicted RBP18.21■□□□□ 0.51
CHCHD1-202ENST00000372837 YTHDC1Q96MU7 727 aaKnown RBP18.2■□□□□ 0.5
CHCHD1-202ENST00000372837 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
CHCHD1-202ENST00000372837 ABCC5O15440 1437 aa18.17■□□□□ 0.5
CHCHD1-202ENST00000372837 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
CHCHD1-202ENST00000372837 LAMC1P11047 1609 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms