RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CHMP4CQ96CF2 233 aa18.52■□□□□ 0.56
GTF3C4-201ENST00000372146 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 PRDM10Q9NQV6 1147 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 KAT6BQ8WYB5 2073 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 ANKRD45Q5TZF3 282 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 ANKRD62A6NC57 917 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 CCP110O43303 1012 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 RALBP1Q15311 655 aa18.51■□□□□ 0.55
GTF3C4-201ENST00000372146 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
GTF3C4-201ENST00000372146 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
GTF3C4-201ENST00000372146 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
GTF3C4-201ENST00000372146 OLFM4Q6UX06 510 aa18.5■□□□□ 0.55
GTF3C4-201ENST00000372146 TNNT1P13805 278 aa18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 TMX4Q9H1E5 349 aaPredicted RBP18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 NF2P35240 595 aa18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 RNF214Q8ND24 703 aa18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 DCAF11Q8TEB1 546 aa18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 TRIM5Q9C035 493 aa18.49■□□□□ 0.55
GTF3C4-201ENST00000372146 EIF3JO75822 258 aaKnown RBP18.48■□□□□ 0.55
GTF3C4-201ENST00000372146 FAM193AP78312 1265 aa18.48■□□□□ 0.55
GTF3C4-201ENST00000372146 ERLIN2O94905 339 aa18.48■□□□□ 0.55
GTF3C4-201ENST00000372146 BCCIPQ9P287 314 aaKnown RBP eCLIP18.48■□□□□ 0.55
GTF3C4-201ENST00000372146 SPC24Q8NBT2 197 aa18.48■□□□□ 0.55
GTF3C4-201ENST00000372146 SMC2O95347 1197 aa18.47■□□□□ 0.55
GTF3C4-201ENST00000372146 FOSBP53539 338 aa18.47■□□□□ 0.55
GTF3C4-201ENST00000372146 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
GTF3C4-201ENST00000372146 ANO2Q9NQ90 1003 aa18.47■□□□□ 0.55
GTF3C4-201ENST00000372146 VPS37CA5D8V6 355 aaPredicted RBP18.47■□□□□ 0.55
GTF3C4-201ENST00000372146 SYNE3Q6ZMZ3 975 aa18.46■□□□□ 0.55
GTF3C4-201ENST00000372146 REC8O95072 547 aa18.46■□□□□ 0.55
GTF3C4-201ENST00000372146 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
GTF3C4-201ENST00000372146 IBSPP21815 317 aaPredicted RBP18.45■□□□□ 0.54
GTF3C4-201ENST00000372146 LRRCC1Q9C099 1032 aa18.45■□□□□ 0.54
GTF3C4-201ENST00000372146 TAX1BP1Q86VP1 789 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 OFD1O75665 1012 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 CCDC73Q6ZRK6 1079 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 NUCB2P80303 420 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 GOLGA6L10A0A0M3HER8 536 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 E9PSI1 815 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 CHMP4AQ9BY43 222 aa18.44■□□□□ 0.54
GTF3C4-201ENST00000372146 DDX11Q96FC9 970 aa18.43■□□□□ 0.54
GTF3C4-201ENST00000372146 FRAT2O75474 233 aaPredicted RBP18.43■□□□□ 0.54
GTF3C4-201ENST00000372146 HDAC5Q9UQL6 1122 aa18.43■□□□□ 0.54
GTF3C4-201ENST00000372146 G3V3G9 751 aa18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 DCAF8Q5TAQ9 597 aa18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 TSPY26PQ9H489 355 aa18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 CPLX1O14810 134 aa18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 TRIM34Q9BYJ4 488 aa18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 ANKRD18AQ8IVF6 992 aa18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 CGNQ9P2M7 1197 aaKnown RBP18.42■□□□□ 0.54
GTF3C4-201ENST00000372146 RBM33Q96EV2 1170 aaKnown RBP18.41■□□□□ 0.54
GTF3C4-201ENST00000372146 SMARCE1Q969G3 411 aa18.41■□□□□ 0.54
GTF3C4-201ENST00000372146 LETM1O95202 739 aaPredicted RBP18.41■□□□□ 0.54
GTF3C4-201ENST00000372146 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
GTF3C4-201ENST00000372146 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
GTF3C4-201ENST00000372146 SMC3Q9UQE7 1217 aa18.4■□□□□ 0.54
GTF3C4-201ENST00000372146 PLIN1O60240 522 aa18.4■□□□□ 0.54
GTF3C4-201ENST00000372146 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
GTF3C4-201ENST00000372146 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
GTF3C4-201ENST00000372146 TRAK2O60296 914 aa18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 CCDC112Q8NEF3 446 aa18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 GBP2P32456 591 aaPredicted RBP18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 RAD21O60216 631 aa18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 ERLIN1O75477 346 aa18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 CCDC102AQ96A19 550 aa18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
GTF3C4-201ENST00000372146 CPLX2Q6PUV4 134 aaKnown RBP18.38■□□□□ 0.53
GTF3C4-201ENST00000372146 CCDC43Q96MW1 224 aaKnown RBP18.38■□□□□ 0.53
GTF3C4-201ENST00000372146 CBX1P83916 185 aa18.37■□□□□ 0.53
GTF3C4-201ENST00000372146 CEP63Q96MT8 703 aa18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 ZHX1Q9UKY1 873 aaPredicted RBP18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 NACADO15069 1562 aa18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 RABEP1Q15276 862 aa18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
GTF3C4-201ENST00000372146 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 FAM177A1Q8N128 213 aaPredicted RBP18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 BRPF1P55201 1214 aaPredicted RBP18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 CCDC181Q5TID7 509 aa18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 PDCL2Q8N4E4 241 aa18.35■□□□□ 0.53
GTF3C4-201ENST00000372146 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
GTF3C4-201ENST00000372146 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
GTF3C4-201ENST00000372146 TMCO3Q6UWJ1 677 aa18.33■□□□□ 0.53
GTF3C4-201ENST00000372146 SDF4Q9BRK5 362 aa18.33■□□□□ 0.53
GTF3C4-201ENST00000372146 CFDP1Q9UEE9 299 aaPredicted RBP18.33■□□□□ 0.53
GTF3C4-201ENST00000372146 SHTN1A0MZ66 631 aa18.33■□□□□ 0.52
GTF3C4-201ENST00000372146 CFAP45Q9UL16 551 aa18.33■□□□□ 0.52
GTF3C4-201ENST00000372146 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
GTF3C4-201ENST00000372146 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
GTF3C4-201ENST00000372146 UBE2Q2Q8WVN8 375 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms