RNA–Protein interactions for RNA: ENST00000371217.9

TCTN3-203, Transcript of tectonic family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-203ENST00000371217 CENPQQ7L2Z9 268 aaPredicted RBP12.93□□□□□ -0.34
TCTN3-203ENST00000371217 AFAP1Q8N556 730 aa12.93□□□□□ -0.34
TCTN3-203ENST00000371217 DDRGK1Q96HY6 314 aa12.93□□□□□ -0.34
TCTN3-203ENST00000371217 TRAPPC8Q9Y2L5 1435 aa12.93□□□□□ -0.34
TCTN3-203ENST00000371217 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
TCTN3-203ENST00000371217 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
TCTN3-203ENST00000371217 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
TCTN3-203ENST00000371217 ABCC2Q92887 1545 aa12.92□□□□□ -0.34
TCTN3-203ENST00000371217 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
TCTN3-203ENST00000371217 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
TCTN3-203ENST00000371217 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
TCTN3-203ENST00000371217 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
TCTN3-203ENST00000371217 RNF17Q9BXT8 1623 aaKnown RBP12.9□□□□□ -0.34
TCTN3-203ENST00000371217 APAF1O14727 1248 aa12.9□□□□□ -0.34
TCTN3-203ENST00000371217 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
TCTN3-203ENST00000371217 ASXL1Q8IXJ9 1541 aa12.89□□□□□ -0.35
TCTN3-203ENST00000371217 DAXXQ9UER7 740 aaPredicted RBP12.89□□□□□ -0.35
TCTN3-203ENST00000371217 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
TCTN3-203ENST00000371217 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
TCTN3-203ENST00000371217 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
TCTN3-203ENST00000371217 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
TCTN3-203ENST00000371217 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
TCTN3-203ENST00000371217 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
TCTN3-203ENST00000371217 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
TCTN3-203ENST00000371217 RGS3P49796 1198 aa12.87□□□□□ -0.35
TCTN3-203ENST00000371217 CFAP70Q5T0N1 1121 aa12.87□□□□□ -0.35
TCTN3-203ENST00000371217 CHD1O14646 1710 aa12.87□□□□□ -0.35
TCTN3-203ENST00000371217 TRMT2AQ8IZ69 625 aaKnown RBP12.87□□□□□ -0.35
TCTN3-203ENST00000371217 BCAR3O75815 825 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 SYNMO15061 1565 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 ABCC1P33527 1531 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 PTPRTO14522 1441 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 NPC1L1Q9UHC9 1359 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 KIF3BO15066 747 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 TRPM2O94759 1503 aa12.86□□□□□ -0.35
TCTN3-203ENST00000371217 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
TCTN3-203ENST00000371217 C8orf34Q49A92 452 aa12.85□□□□□ -0.35
TCTN3-203ENST00000371217 KANK1Q14678 1352 aa12.85□□□□□ -0.35
TCTN3-203ENST00000371217 E9PSI1 815 aa12.84□□□□□ -0.35
TCTN3-203ENST00000371217 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
TCTN3-203ENST00000371217 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
TCTN3-203ENST00000371217 CARD14Q9BXL6 1004 aa12.84□□□□□ -0.35
TCTN3-203ENST00000371217 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
TCTN3-203ENST00000371217 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.36
TCTN3-203ENST00000371217 CLTCL1P53675 1640 aa12.82□□□□□ -0.36
TCTN3-203ENST00000371217 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
TCTN3-203ENST00000371217 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
TCTN3-203ENST00000371217 ZCCHC11Q5TAX3 1644 aaKnown RBP12.81□□□□□ -0.36
TCTN3-203ENST00000371217 SPHKAPQ2M3C7 1700 aa12.81□□□□□ -0.36
TCTN3-203ENST00000371217 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
TCTN3-203ENST00000371217 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
TCTN3-203ENST00000371217 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
TCTN3-203ENST00000371217 ZFYVE16Q7Z3T8 1539 aa12.8□□□□□ -0.36
TCTN3-203ENST00000371217 IGHDP01880 384 aa12.8□□□□□ -0.36
TCTN3-203ENST00000371217 CEP152O94986 1710 aa12.79□□□□□ -0.36
TCTN3-203ENST00000371217 TNNT2P45379 298 aaPredicted RBP12.79□□□□□ -0.36
TCTN3-203ENST00000371217 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
TCTN3-203ENST00000371217 NGEFQ8N5V2 710 aa12.79□□□□□ -0.36
TCTN3-203ENST00000371217 ERVK-7P63135 1459 aa12.78□□□□□ -0.36
TCTN3-203ENST00000371217 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
TCTN3-203ENST00000371217 WWC1Q8IX03 1113 aa12.78□□□□□ -0.36
TCTN3-203ENST00000371217 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
TCTN3-203ENST00000371217 MYOM1P52179 1685 aa12.78□□□□□ -0.36
TCTN3-203ENST00000371217 CENPJQ9HC77 1338 aaPredicted RBP12.78□□□□□ -0.36
TCTN3-203ENST00000371217 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
TCTN3-203ENST00000371217 GSE1Q14687 1217 aa12.77□□□□□ -0.37
TCTN3-203ENST00000371217 MORC1Q86VD1 984 aa12.77□□□□□ -0.37
TCTN3-203ENST00000371217 PANK1Q8TE04 598 aa12.77□□□□□ -0.37
TCTN3-203ENST00000371217 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
TCTN3-203ENST00000371217 KDM5AP29375 1690 aaKnown RBP12.77□□□□□ -0.37
TCTN3-203ENST00000371217 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
TCTN3-203ENST00000371217 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
TCTN3-203ENST00000371217 TET3O43151 1660 aa12.76□□□□□ -0.37
TCTN3-203ENST00000371217 RTN4Q9NQC3 1192 aaKnown RBP12.76□□□□□ -0.37
TCTN3-203ENST00000371217 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
TCTN3-203ENST00000371217 UGGT1Q9NYU2 1555 aa12.76□□□□□ -0.37
TCTN3-203ENST00000371217 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
TCTN3-203ENST00000371217 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
TCTN3-203ENST00000371217 FANCAO15360 1455 aa12.75□□□□□ -0.37
TCTN3-203ENST00000371217 ATP7AQ04656 1500 aa12.75□□□□□ -0.37
TCTN3-203ENST00000371217 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
TCTN3-203ENST00000371217 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
TCTN3-203ENST00000371217 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
TCTN3-203ENST00000371217 MYOM2P54296 1465 aa12.73□□□□□ -0.37
TCTN3-203ENST00000371217 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
TCTN3-203ENST00000371217 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
TCTN3-203ENST00000371217 KIAA1210Q9ULL0 1709 aa12.73□□□□□ -0.37
TCTN3-203ENST00000371217 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
TCTN3-203ENST00000371217 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
TCTN3-203ENST00000371217 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
TCTN3-203ENST00000371217 ARAP3Q8WWN8 1544 aa12.72□□□□□ -0.37
TCTN3-203ENST00000371217 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
TCTN3-203ENST00000371217 ABCA6Q8N139 1617 aa12.72□□□□□ -0.37
TCTN3-203ENST00000371217 FRAT2O75474 233 aaPredicted RBP12.71□□□□□ -0.37
TCTN3-203ENST00000371217 MAPK8IP3Q9UPT6 1336 aa12.71□□□□□ -0.37
TCTN3-203ENST00000371217 ADGRL1O94910 1474 aa12.71□□□□□ -0.37
TCTN3-203ENST00000371217 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
TCTN3-203ENST00000371217 TMEM132EQ6IEE7 984 aa12.71□□□□□ -0.37
TCTN3-203ENST00000371217 NINLQ9Y2I6 1382 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms