RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGCLL1-204ENST00000370852 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
HMGCLL1-204ENST00000370852 TRMT2AQ8IZ69 625 aaKnown RBP11.9□□□□□ -0.5
HMGCLL1-204ENST00000370852 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
HMGCLL1-204ENST00000370852 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.51
HMGCLL1-204ENST00000370852 ZSCAN20P17040 1043 aaPredicted RBP11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 DDIT3P35638 169 aa11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 FAM177BA6PVY3 158 aa11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 CCDC173Q0VFZ6 552 aa11.89□□□□□ -0.51
HMGCLL1-204ENST00000370852 PLEKHH2Q8IVE3 1493 aa11.88□□□□□ -0.51
HMGCLL1-204ENST00000370852 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
HMGCLL1-204ENST00000370852 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
HMGCLL1-204ENST00000370852 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
HMGCLL1-204ENST00000370852 DMTNQ08495 405 aa11.88□□□□□ -0.51
HMGCLL1-204ENST00000370852 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
HMGCLL1-204ENST00000370852 ROCK1Q13464 1354 aa11.87□□□□□ -0.51
HMGCLL1-204ENST00000370852 SAMD9Q5K651 1589 aa11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 IGSF3O75054 1194 aa11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 SSFA2P28290 1259 aa11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 CBX1P83916 185 aa11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 HSCBQ8IWL3 235 aa11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 NKTRP30414 1462 aaKnown RBP11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
HMGCLL1-204ENST00000370852 ZBTB22O15209 634 aa11.85□□□□□ -0.51
HMGCLL1-204ENST00000370852 CGNL1Q0VF96 1302 aa11.85□□□□□ -0.51
HMGCLL1-204ENST00000370852 MPNDQ8N594 471 aa11.85□□□□□ -0.51
HMGCLL1-204ENST00000370852 TESK2Q96S53 571 aa11.85□□□□□ -0.51
HMGCLL1-204ENST00000370852 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
HMGCLL1-204ENST00000370852 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
HMGCLL1-204ENST00000370852 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
HMGCLL1-204ENST00000370852 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
HMGCLL1-204ENST00000370852 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
HMGCLL1-204ENST00000370852 ISY1Q9ULR0 285 aaKnown RBP11.84□□□□□ -0.51
HMGCLL1-204ENST00000370852 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
HMGCLL1-204ENST00000370852 AK9Q5TCS8 1911 aa11.83□□□□□ -0.52
HMGCLL1-204ENST00000370852 RAB3GAP1Q15042 981 aa11.83□□□□□ -0.52
HMGCLL1-204ENST00000370852 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
HMGCLL1-204ENST00000370852 CHAMP1Q96JM3 812 aa11.83□□□□□ -0.52
HMGCLL1-204ENST00000370852 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
HMGCLL1-204ENST00000370852 EPRSP07814 1512 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 INSRP06213 1382 aa11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 TERF1P54274 439 aa11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 ATP2B3Q16720 1220 aa11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 NOL7Q9UMY1 257 aaKnown RBP11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 NCOA3Q9Y6Q9 1424 aa11.82□□□□□ -0.52
HMGCLL1-204ENST00000370852 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 CCDC94Q9BW85 323 aaPredicted RBP11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 HSP90AB1P08238 724 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
HMGCLL1-204ENST00000370852 DYNC1I1O14576 645 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 TMEM51Q9NW97 253 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 MAGI2Q86UL8 1455 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 NESP48681 1621 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 NUP155O75694 1391 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 UTP14CQ5TAP6 766 aaKnown RBP11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 CAVIN1Q6NZI2 390 aaKnown RBP11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 GBP4Q96PP9 640 aa11.8□□□□□ -0.52
HMGCLL1-204ENST00000370852 GAPVD1Q14C86 1478 aa11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 PRIM1P49642 420 aaKnown RBP11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 PMFBP1Q8TBY8 1022 aa11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 COL17A1Q9UMD9 1497 aaPredicted RBP11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 E9PSI1 815 aa11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 SMC5Q8IY18 1101 aa11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 GAS2L2Q8NHY3 880 aa11.79□□□□□ -0.52
HMGCLL1-204ENST00000370852 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
HMGCLL1-204ENST00000370852 ANP32BQ92688 251 aaKnown RBP11.78□□□□□ -0.52
HMGCLL1-204ENST00000370852 KIF2CQ99661 725 aa11.78□□□□□ -0.52
HMGCLL1-204ENST00000370852 ZNF830Q96NB3 372 aaPredicted RBP11.78□□□□□ -0.52
HMGCLL1-204ENST00000370852 TDRD9Q8NDG6 1382 aaKnown RBP11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 PKP1Q13835 747 aa11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 MCTP1Q6DN14 999 aa11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 C17orf53Q8N3J3 647 aaPredicted RBP11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 ZKSCAN5Q9Y2L8 839 aa11.77□□□□□ -0.52
HMGCLL1-204ENST00000370852 BAG4O95429 457 aaKnown RBP11.77□□□□□ -0.53
HMGCLL1-204ENST00000370852 SASS6Q6UVJ0 657 aa11.77□□□□□ -0.53
HMGCLL1-204ENST00000370852 KNSTRNQ9Y448 316 aa11.77□□□□□ -0.53
HMGCLL1-204ENST00000370852 ERBINQ96RT1 1412 aa11.77□□□□□ -0.53
HMGCLL1-204ENST00000370852 PDLIM2Q96JY6 352 aa11.76□□□□□ -0.53
HMGCLL1-204ENST00000370852 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 RNF214Q8ND24 703 aa11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 RWDD1Q9H446 243 aaPredicted RBP11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 NSFL1CQ9UNZ2 370 aaKnown RBP11.75□□□□□ -0.53
HMGCLL1-204ENST00000370852 HMGXB3Q12766 1538 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms