RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.07
GPC4-201ENST00000370828 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.07
GPC4-201ENST00000370828 PDCL3Q9H2J4 239 aa15.51■□□□□ 0.07
GPC4-201ENST00000370828 BRD4O60885 1362 aaPredicted RBP15.51■□□□□ 0.07
GPC4-201ENST00000370828 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
GPC4-201ENST00000370828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.51■□□□□ 0.07
GPC4-201ENST00000370828 ZSCAN30Q86W11 494 aa15.5■□□□□ 0.07
GPC4-201ENST00000370828 ANKRD30AQ9BXX3 1397 aa15.5■□□□□ 0.07
GPC4-201ENST00000370828 NOC3LQ8WTT2 800 aaKnown RBP15.49■□□□□ 0.07
GPC4-201ENST00000370828 STK26Q9P289 416 aa15.49■□□□□ 0.07
GPC4-201ENST00000370828 REC8O95072 547 aa15.49■□□□□ 0.07
GPC4-201ENST00000370828 ZHX1Q9UKY1 873 aaPredicted RBP15.49■□□□□ 0.07
GPC4-201ENST00000370828 TSPYL1Q9H0U9 437 aa15.49■□□□□ 0.07
GPC4-201ENST00000370828 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
GPC4-201ENST00000370828 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
GPC4-201ENST00000370828 GPS2Q13227 327 aa15.48■□□□□ 0.07
GPC4-201ENST00000370828 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
GPC4-201ENST00000370828 BCAR3O75815 825 aa15.47■□□□□ 0.07
GPC4-201ENST00000370828 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
GPC4-201ENST00000370828 EIF3AQ14152 1382 aaKnown RBP15.47■□□□□ 0.07
GPC4-201ENST00000370828 UACAQ9BZF9 1416 aa15.47■□□□□ 0.07
GPC4-201ENST00000370828 C11orf95C9JLR9 678 aaPredicted RBP15.46■□□□□ 0.07
GPC4-201ENST00000370828 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
GPC4-201ENST00000370828 AEBP1Q8IUX7 1158 aa15.46■□□□□ 0.07
GPC4-201ENST00000370828 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.07
GPC4-201ENST00000370828 SF3A1Q15459 793 aaKnown RBP15.46■□□□□ 0.06
GPC4-201ENST00000370828 CBX1P83916 185 aa15.45■□□□□ 0.06
GPC4-201ENST00000370828 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
GPC4-201ENST00000370828 NPHP1O15259 732 aa15.45■□□□□ 0.06
GPC4-201ENST00000370828 CREBRFQ8IUR6 639 aa15.45■□□□□ 0.06
GPC4-201ENST00000370828 KIF21BO75037 1637 aa15.45■□□□□ 0.06
GPC4-201ENST00000370828 A0A0G2JS52 829 aa15.44■□□□□ 0.06
GPC4-201ENST00000370828 ANO2Q9NQ90 1003 aa15.44■□□□□ 0.06
GPC4-201ENST00000370828 HDGFL2Q7Z4V5 671 aaPredicted RBP15.44■□□□□ 0.06
GPC4-201ENST00000370828 STK31Q9BXU1 1019 aa15.44■□□□□ 0.06
GPC4-201ENST00000370828 VPS37CA5D8V6 355 aaPredicted RBP15.43■□□□□ 0.06
GPC4-201ENST00000370828 H3BQV1 296 aa15.43■□□□□ 0.06
GPC4-201ENST00000370828 IFFO2Q5TF58 517 aa15.43■□□□□ 0.06
GPC4-201ENST00000370828 XPCQ01831 940 aaPredicted RBP15.43■□□□□ 0.06
GPC4-201ENST00000370828 TPD52L1Q16890 204 aaPredicted RBP15.43■□□□□ 0.06
GPC4-201ENST00000370828 MBD3O95983 291 aa15.43■□□□□ 0.06
GPC4-201ENST00000370828 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
GPC4-201ENST00000370828 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
GPC4-201ENST00000370828 TPM3P06753 285 aa15.42■□□□□ 0.06
GPC4-201ENST00000370828 INTS3Q68E01 1043 aaKnown RBP15.42■□□□□ 0.06
GPC4-201ENST00000370828 MNS1Q8NEH6 495 aa15.42■□□□□ 0.06
GPC4-201ENST00000370828 FBXW7Q969H0 707 aa15.42■□□□□ 0.06
GPC4-201ENST00000370828 ARGLU1Q9NWB6 273 aaPredicted RBP15.42■□□□□ 0.06
GPC4-201ENST00000370828 CWC15Q9P013 229 aaKnown RBP15.41■□□□□ 0.06
GPC4-201ENST00000370828 CDC45O75419 566 aa15.41■□□□□ 0.06
GPC4-201ENST00000370828 NBPF8Q3BBV2 869 aa15.41■□□□□ 0.06
GPC4-201ENST00000370828 C20orf194Q5TEA3 1177 aa15.41■□□□□ 0.06
GPC4-201ENST00000370828 STK11IPQ8N1F8 1099 aa15.41■□□□□ 0.06
GPC4-201ENST00000370828 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
GPC4-201ENST00000370828 AAMPQ13685 434 aa15.39■□□□□ 0.06
GPC4-201ENST00000370828 CLCN1P35523 988 aa15.39■□□□□ 0.05
GPC4-201ENST00000370828 NGEFQ8N5V2 710 aa15.39■□□□□ 0.05
GPC4-201ENST00000370828 HNRNPMP52272 730 aaKnown RBP eCLIP15.39■□□□□ 0.05
GPC4-201ENST00000370828 SASS6Q6UVJ0 657 aa15.39■□□□□ 0.05
GPC4-201ENST00000370828 SMC3Q9UQE7 1217 aa15.39■□□□□ 0.05
GPC4-201ENST00000370828 PDE3AQ14432 1141 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 PDCL2Q8N4E4 241 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 FAM184AQ8NB25 1140 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 PANK2Q9BZ23 570 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 KIF3AQ9Y496 699 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 ERICH4A6NGS2 130 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 GPATCH3Q96I76 525 aa15.38■□□□□ 0.05
GPC4-201ENST00000370828 NEFHP12036 1026 aa15.37■□□□□ 0.05
GPC4-201ENST00000370828 KANK1Q14678 1352 aa15.37■□□□□ 0.05
GPC4-201ENST00000370828 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
GPC4-201ENST00000370828 K7ELQ4 463 aaPredicted RBP15.37■□□□□ 0.05
GPC4-201ENST00000370828 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
GPC4-201ENST00000370828 TRAK1Q9UPV9 953 aa15.37■□□□□ 0.05
GPC4-201ENST00000370828 XRCC6P12956 609 aaKnown RBP eCLIP15.37■□□□□ 0.05
GPC4-201ENST00000370828 CCDC27Q2M243 656 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 CLGNO14967 610 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 TBC1D2Q9BYX2 928 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 NEK4P51957 841 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 GORABQ5T7V8 394 aa15.36■□□□□ 0.05
GPC4-201ENST00000370828 CGNQ9P2M7 1197 aaKnown RBP15.36■□□□□ 0.05
GPC4-201ENST00000370828 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
GPC4-201ENST00000370828 WWC1Q8IX03 1113 aa15.35■□□□□ 0.05
GPC4-201ENST00000370828 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
GPC4-201ENST00000370828 RABEP1Q15276 862 aa15.34■□□□□ 0.05
GPC4-201ENST00000370828 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
GPC4-201ENST00000370828 CCDC112Q8NEF3 446 aa15.34■□□□□ 0.05
GPC4-201ENST00000370828 RIPK4P57078 832 aa15.34■□□□□ 0.05
GPC4-201ENST00000370828 DEF6Q9H4E7 631 aa15.34■□□□□ 0.05
GPC4-201ENST00000370828 FIBPO43427 364 aa15.33■□□□□ 0.05
GPC4-201ENST00000370828 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.04
GPC4-201ENST00000370828 SYCE3A1L190 88 aa15.33■□□□□ 0.04
GPC4-201ENST00000370828 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
GPC4-201ENST00000370828 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
GPC4-201ENST00000370828 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
GPC4-201ENST00000370828 PPP2R1AP30153 589 aa15.32■□□□□ 0.04
GPC4-201ENST00000370828 PES1O00541 588 aaKnown RBP15.32■□□□□ 0.04
GPC4-201ENST00000370828 CCDC34Q96HJ3 373 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms